RNA–Protein interactions for RNA: ENST00000517403.5

PABPC1-202, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-202ENST00000517403 SMG7Q92540 1137 aaKnown RBP9.52□□□□□ -0.89
PABPC1-202ENST00000517403 FGF14Q92915 247 aa9.52□□□□□ -0.89
PABPC1-202ENST00000517403 FAM84AQ96KN4 292 aa9.52□□□□□ -0.89
PABPC1-202ENST00000517403 SNX27Q96L92 541 aa9.52□□□□□ -0.89
PABPC1-202ENST00000517403 PRIMPOLQ96LW4 560 aa9.52□□□□□ -0.89
PABPC1-202ENST00000517403 MFSD14AQ96MC6 490 aa9.52□□□□□ -0.89
PABPC1-202ENST00000517403 FAM193BQ96PV7 902 aaPredicted RBP9.52□□□□□ -0.89
PABPC1-202ENST00000517403 NACC1Q96RE7 527 aa9.52□□□□□ -0.89
PABPC1-202ENST00000517403 FIZ1Q96SL8 496 aa9.52□□□□□ -0.89
PABPC1-202ENST00000517403 TMUB1Q9BVT8 246 aa9.52□□□□□ -0.89
PABPC1-202ENST00000517403 KANSL3Q9P2N6 904 aa9.52□□□□□ -0.89
PABPC1-202ENST00000517403 TUBGCP4Q9UGJ1 667 aa9.52□□□□□ -0.89
PABPC1-202ENST00000517403 DUSP12Q9UNI6 340 aa9.52□□□□□ -0.89
PABPC1-202ENST00000517403 USTQ9Y2C2 406 aa9.52□□□□□ -0.89
PABPC1-202ENST00000517403 PHLPP2Q6ZVD8 1323 aa9.52□□□□□ -0.89
PABPC1-202ENST00000517403 DCHS1Q96JQ0 3298 aa9.51□□□□□ -0.89
PABPC1-202ENST00000517403 FANCMQ8IYD8 2048 aa9.51□□□□□ -0.89
PABPC1-202ENST00000517403 ANHXE9PGG2 379 aa9.51□□□□□ -0.89
PABPC1-202ENST00000517403 N4BP3O15049 544 aa9.51□□□□□ -0.89
PABPC1-202ENST00000517403 SLC16A4O15374 487 aa9.51□□□□□ -0.89
PABPC1-202ENST00000517403 CCL16O15467 120 aa9.51□□□□□ -0.89
PABPC1-202ENST00000517403 ADH1AP07327 375 aa9.51□□□□□ -0.89
PABPC1-202ENST00000517403 CFHP08603 1231 aa9.51□□□□□ -0.89
PABPC1-202ENST00000517403 FGFR3P22607 806 aa9.51□□□□□ -0.89
PABPC1-202ENST00000517403 TNFSF9P41273 254 aa9.51□□□□□ -0.89
PABPC1-202ENST00000517403 CDR1P51861 262 aa9.51□□□□□ -0.89
PABPC1-202ENST00000517403 SLC12A3P55017 1021 aa9.51□□□□□ -0.89
PABPC1-202ENST00000517403 WNT7BP56706 349 aa9.51□□□□□ -0.89
PABPC1-202ENST00000517403 SPAG1Q07617 926 aa9.51□□□□□ -0.89
PABPC1-202ENST00000517403 GIT2Q14161 759 aa9.51□□□□□ -0.89
PABPC1-202ENST00000517403 PSMD5Q16401 504 aa9.51□□□□□ -0.89
PABPC1-202ENST00000517403 ATAT1Q5SQI0 421 aa9.51□□□□□ -0.89
PABPC1-202ENST00000517403 HYIQ5T013 277 aa9.51□□□□□ -0.89
PABPC1-202ENST00000517403 ATF7IP2Q5U623 682 aa9.51□□□□□ -0.89
PABPC1-202ENST00000517403 PARM1Q6UWI2 310 aa9.51□□□□□ -0.89
PABPC1-202ENST00000517403 GRASPQ7Z6J2 395 aaPredicted RBP9.51□□□□□ -0.89
PABPC1-202ENST00000517403 ZBTB33Q86T24 672 aa9.51□□□□□ -0.89
PABPC1-202ENST00000517403 ACO2Q99798 780 aaKnown RBP9.51□□□□□ -0.89
PABPC1-202ENST00000517403 EMILIN2Q9BXX0 1053 aa9.51□□□□□ -0.89
PABPC1-202ENST00000517403 TRIM6Q9C030 488 aaPredicted RBP9.51□□□□□ -0.89
PABPC1-202ENST00000517403 OCEL1Q9H607 264 aa9.51□□□□□ -0.89
PABPC1-202ENST00000517403 NPDC1Q9NQX5 325 aaPredicted RBP9.51□□□□□ -0.89
PABPC1-202ENST00000517403 BLOC1S4Q9NUP1 217 aa9.51□□□□□ -0.89
PABPC1-202ENST00000517403 DLGAP2Q9P1A6 1054 aa9.51□□□□□ -0.89
PABPC1-202ENST00000517403 EPS15L1Q9UBC2 864 aa9.51□□□□□ -0.89
PABPC1-202ENST00000517403 LRWD1Q9UFC0 647 aa9.51□□□□□ -0.89
PABPC1-202ENST00000517403 TNFSF13BQ9Y275 285 aa9.51□□□□□ -0.89
PABPC1-202ENST00000517403 NR2E1Q9Y466 385 aa9.51□□□□□ -0.89
PABPC1-202ENST00000517403 CACNA1HO95180 2353 aa9.51□□□□□ -0.89
PABPC1-202ENST00000517403 SMIM28A0A1B0GU29 152 aa9.5□□□□□ -0.89
PABPC1-202ENST00000517403 TMEM189-UBE2V1I3L0A0 370 aa9.5□□□□□ -0.89
PABPC1-202ENST00000517403 TBC1D4O60343 1298 aa9.5□□□□□ -0.89
PABPC1-202ENST00000517403 SEC24AO95486 1093 aa9.5□□□□□ -0.89
PABPC1-202ENST00000517403 HARSP12081 509 aaKnown RBP9.5□□□□□ -0.89
PABPC1-202ENST00000517403 GJB2P29033 226 aa9.5□□□□□ -0.89
PABPC1-202ENST00000517403 HOXC13P31276 330 aa9.5□□□□□ -0.89
PABPC1-202ENST00000517403 GRM5P41594 1212 aa9.5□□□□□ -0.89
PABPC1-202ENST00000517403 CCR2P41597 374 aa9.5□□□□□ -0.89
PABPC1-202ENST00000517403 TRAPPC10P48553 1259 aa9.5□□□□□ -0.89
PABPC1-202ENST00000517403 HMGN5P82970 282 aaKnown RBP9.5□□□□□ -0.89
PABPC1-202ENST00000517403 ORC2Q13416 577 aaPredicted RBP9.5□□□□□ -0.89
PABPC1-202ENST00000517403 PCBP1Q15365 356 aaKnown RBP eCLIP9.5□□□□□ -0.891e-30■■□□□ 12.2
PABPC1-202ENST00000517403 MAPK6Q16659 721 aa9.5□□□□□ -0.89
PABPC1-202ENST00000517403 UPP1Q16831 310 aa9.5□□□□□ -0.89
PABPC1-202ENST00000517403 TSR1Q2NL82 804 aaKnown RBP9.5□□□□□ -0.89
PABPC1-202ENST00000517403 SLC10A6Q3KNW5 377 aa9.5□□□□□ -0.89
PABPC1-202ENST00000517403 USP41Q3LFD5 358 aa9.5□□□□□ -0.89
PABPC1-202ENST00000517403 ZNF568Q3ZCX4 644 aa9.5□□□□□ -0.89
PABPC1-202ENST00000517403 FAM173BQ6P4H8 233 aa9.5□□□□□ -0.89
PABPC1-202ENST00000517403 PPFIBP1Q86W92 1011 aa9.5□□□□□ -0.89
PABPC1-202ENST00000517403 CEP57Q86XR8 500 aa9.5□□□□□ -0.89
PABPC1-202ENST00000517403 ZBTB8OSQ8IWT0 167 aa9.5□□□□□ -0.89
PABPC1-202ENST00000517403 SUGP1Q8IWZ8 645 aaKnown RBP9.5□□□□□ -0.89
PABPC1-202ENST00000517403 EXOC8Q8IYI6 725 aa9.5□□□□□ -0.89
PABPC1-202ENST00000517403 SIX5Q8N196 739 aa9.5□□□□□ -0.89
PABPC1-202ENST00000517403 SLC44A3Q8N4M1 653 aa9.5□□□□□ -0.89
PABPC1-202ENST00000517403 TTC9BQ8N6N2 239 aa9.5□□□□□ -0.89
PABPC1-202ENST00000517403 TMEM161BQ8NDZ6 487 aa9.5□□□□□ -0.89
PABPC1-202ENST00000517403 SLC7A14Q8TBB6 771 aa9.5□□□□□ -0.89
PABPC1-202ENST00000517403 GPR152Q8TDT2 470 aa9.5□□□□□ -0.89
PABPC1-202ENST00000517403 ING5Q8WYH8 240 aa9.5□□□□□ -0.89
PABPC1-202ENST00000517403 CCDC43Q96MW1 224 aaKnown RBP9.5□□□□□ -0.89
PABPC1-202ENST00000517403 FGFBP2Q9BYJ0 223 aa9.5□□□□□ -0.89
PABPC1-202ENST00000517403 PRKD2Q9BZL6 878 aa9.5□□□□□ -0.89
PABPC1-202ENST00000517403 PLA2G2FQ9BZM2 168 aa9.5□□□□□ -0.89
PABPC1-202ENST00000517403 CRISPLD1Q9H336 500 aa9.5□□□□□ -0.89
PABPC1-202ENST00000517403 UBN1Q9NPG3 1134 aa9.5□□□□□ -0.89
PABPC1-202ENST00000517403 SH2B1Q9NRF2 756 aaPredicted RBP9.5□□□□□ -0.89
PABPC1-202ENST00000517403 FNIP2Q9P278 1114 aa9.5□□□□□ -0.89
PABPC1-202ENST00000517403 DNMT3BQ9UBC3 853 aaKnown RBP9.5□□□□□ -0.89
PABPC1-202ENST00000517403 MTRRQ9UBK8 725 aa9.5□□□□□ -0.89
PABPC1-202ENST00000517403 NUMBLQ9Y6R0 609 aa9.5□□□□□ -0.89
PABPC1-202ENST00000517403 KIF26AQ9ULI4 1882 aaPredicted RBP9.5□□□□□ -0.89
PABPC1-202ENST00000517403 PIEZO1Q92508 2521 aa9.5□□□□□ -0.89
PABPC1-202ENST00000517403 TICRRQ7Z2Z1 1910 aa9.5□□□□□ -0.89
PABPC1-202ENST00000517403 SF3B1O75533 1304 aaKnown RBP eCLIP9.5□□□□□ -0.89
PABPC1-202ENST00000517403 DMDP11532 3685 aa9.5□□□□□ -0.89
PABPC1-202ENST00000517403 SCN1AP35498 2009 aa9.49□□□□□ -0.89
PABPC1-202ENST00000517403 OBSL1O75147 1896 aa9.49□□□□□ -0.89
PABPC1-202ENST00000517403 MIA3Q5JRA6 1907 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms