RNA–Protein interactions for RNA: ENST00000516543.1

SNORA40.14-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 86 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.14-201ENST00000516543 PHF2O75151 1096 aa3.34□□□□□ -1.87
SNORA40.14-201ENST00000516543 ELLP55199 621 aaPredicted RBP3.34□□□□□ -1.87
SNORA40.14-201ENST00000516543 BLOC1S1P78537 153 aa3.34□□□□□ -1.87
SNORA40.14-201ENST00000516543 FOXF2Q12947 444 aa3.34□□□□□ -1.87
SNORA40.14-201ENST00000516543 SP140Q13342 867 aa3.34□□□□□ -1.87
SNORA40.14-201ENST00000516543 UBXN2BQ14CS0 331 aa3.34□□□□□ -1.87
SNORA40.14-201ENST00000516543 CYP2A13Q16696 494 aa3.34□□□□□ -1.87
SNORA40.14-201ENST00000516543 SPDYE7PQ495Y7 208 aa3.34□□□□□ -1.87
SNORA40.14-201ENST00000516543 UBE3BQ7Z3V4 1068 aa3.34□□□□□ -1.87
SNORA40.14-201ENST00000516543 PQLC1Q8N2U9 271 aa3.34□□□□□ -1.87
SNORA40.14-201ENST00000516543 UBXN4Q92575 508 aa3.34□□□□□ -1.87
SNORA40.14-201ENST00000516543 HOXB13Q92826 284 aaPredicted RBP3.34□□□□□ -1.87
SNORA40.14-201ENST00000516543 FUBP1Q96AE4 644 aaKnown RBP3.34□□□□□ -1.87
SNORA40.14-201ENST00000516543 UHRF1Q96T88 793 aaPredicted RBP3.34□□□□□ -1.87
SNORA40.14-201ENST00000516543 BCO1Q9HAY6 547 aa3.34□□□□□ -1.87
SNORA40.14-201ENST00000516543 CASS4Q9NQ75 786 aa3.34□□□□□ -1.87
SNORA40.14-201ENST00000516543 SEMA4GQ9NTN9 838 aa3.34□□□□□ -1.87
SNORA40.14-201ENST00000516543 PLAAQ9Y263 795 aa3.34□□□□□ -1.87
SNORA40.14-201ENST00000516543 ACTL7AQ9Y615 435 aa3.34□□□□□ -1.87
SNORA40.14-201ENST00000516543 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.33□□□□□ -1.88
SNORA40.14-201ENST00000516543 GPANK1O95872 356 aa3.33□□□□□ -1.88
SNORA40.14-201ENST00000516543 C1RP00736 705 aa3.33□□□□□ -1.88
SNORA40.14-201ENST00000516543 CDK4P11802 303 aa3.33□□□□□ -1.88
SNORA40.14-201ENST00000516543 ATP5JP18859 108 aa3.33□□□□□ -1.88
SNORA40.14-201ENST00000516543 GCSHP23434 173 aa3.33□□□□□ -1.88
SNORA40.14-201ENST00000516543 PCSK1P29120 753 aa3.33□□□□□ -1.88
SNORA40.14-201ENST00000516543 ECHS1P30084 290 aa3.33□□□□□ -1.88
SNORA40.14-201ENST00000516543 GUCY1A2P33402 732 aa3.33□□□□□ -1.88
SNORA40.14-201ENST00000516543 SLC6A9P48067 706 aa3.33□□□□□ -1.88
SNORA40.14-201ENST00000516543 MXRA7P84157 204 aa3.33□□□□□ -1.88
SNORA40.14-201ENST00000516543 SEPT2Q15019 361 aa3.33□□□□□ -1.88
SNORA40.14-201ENST00000516543 RRP12Q5JTH9 1297 aaKnown RBP3.33□□□□□ -1.88
SNORA40.14-201ENST00000516543 ZNF529Q6P280 563 aa3.33□□□□□ -1.88
SNORA40.14-201ENST00000516543 KCNK18Q7Z418 384 aa3.33□□□□□ -1.88
SNORA40.14-201ENST00000516543 KIAA0907Q7Z7F0 614 aaPredicted RBP3.33□□□□□ -1.88
SNORA40.14-201ENST00000516543 RNF180Q86T96 592 aa3.33□□□□□ -1.88
SNORA40.14-201ENST00000516543 LMBR1Q8WVP7 490 aa3.33□□□□□ -1.88
SNORA40.14-201ENST00000516543 USP7Q93009 1102 aa3.33□□□□□ -1.88
SNORA40.14-201ENST00000516543 MARS2Q96GW9 593 aaKnown RBP3.33□□□□□ -1.88
SNORA40.14-201ENST00000516543 PDLIM2Q96JY6 352 aa3.33□□□□□ -1.88
SNORA40.14-201ENST00000516543 DRC1Q96MC2 740 aa3.33□□□□□ -1.88
SNORA40.14-201ENST00000516543 AIFM2Q9BRQ8 373 aa3.33□□□□□ -1.88
SNORA40.14-201ENST00000516543 UNKLQ9H9P5 680 aaKnown RBP3.33□□□□□ -1.88
SNORA40.14-201ENST00000516543 IFT122Q9HBG6 1241 aa3.33□□□□□ -1.88
SNORA40.14-201ENST00000516543 GALNT9Q9HCQ5 603 aa3.33□□□□□ -1.88
SNORA40.14-201ENST00000516543 TMEM74BQ9NUR3 256 aa3.33□□□□□ -1.88
SNORA40.14-201ENST00000516543 ASB6Q9NWX5 421 aa3.33□□□□□ -1.88
SNORA40.14-201ENST00000516543 HSFX1Q9UBD0 423 aa3.33□□□□□ -1.88
SNORA40.14-201ENST00000516543 AJAP1Q9UKB5 411 aaPredicted RBP3.33□□□□□ -1.88
SNORA40.14-201ENST00000516543 CGB1A6NKQ9 187 aa3.32□□□□□ -1.88
SNORA40.14-201ENST00000516543 GOLGA8AA7E2F4 631 aa3.32□□□□□ -1.88
SNORA40.14-201ENST00000516543 POMCP01189 267 aa3.32□□□□□ -1.88
SNORA40.14-201ENST00000516543 PER3P56645 1201 aa3.32□□□□□ -1.88
SNORA40.14-201ENST00000516543 SCAND1P57086 179 aa3.32□□□□□ -1.88
SNORA40.14-201ENST00000516543 PROK1P58294 105 aa3.32□□□□□ -1.88
SNORA40.14-201ENST00000516543 NOMO3P69849 1222 aa3.32□□□□□ -1.88
SNORA40.14-201ENST00000516543 MRPS35P82673 323 aaKnown RBP3.32□□□□□ -1.88
SNORA40.14-201ENST00000516543 STRN3Q13033 797 aa3.32□□□□□ -1.88
SNORA40.14-201ENST00000516543 NOMO1Q15155 1222 aa3.32□□□□□ -1.88
SNORA40.14-201ENST00000516543 GEN1Q17RS7 908 aa3.32□□□□□ -1.88
SNORA40.14-201ENST00000516543 MUM1Q2TAK8 710 aa3.32□□□□□ -1.88
SNORA40.14-201ENST00000516543 NOMO2Q5JPE7 1267 aa3.32□□□□□ -1.88
SNORA40.14-201ENST00000516543 TOR2AQ5JU69 321 aa3.32□□□□□ -1.88
SNORA40.14-201ENST00000516543 ARMC6Q6NXE6 501 aa3.32□□□□□ -1.88
SNORA40.14-201ENST00000516543 DRC7Q8IY82 874 aa3.32□□□□□ -1.88
SNORA40.14-201ENST00000516543 SRRM1Q8IYB3 904 aaKnown RBP3.32□□□□□ -1.88
SNORA40.14-201ENST00000516543 SH2D3CQ8N5H7 860 aa3.32□□□□□ -1.88
SNORA40.14-201ENST00000516543 OR2I1PQ8NGU4 316 aa3.32□□□□□ -1.88
SNORA40.14-201ENST00000516543 ACTRT2Q8TDY3 377 aa3.32□□□□□ -1.88
SNORA40.14-201ENST00000516543 AUTS2Q8WXX7 1259 aa3.32□□□□□ -1.88
SNORA40.14-201ENST00000516543 SLC9A6Q92581 669 aa3.32□□□□□ -1.88
SNORA40.14-201ENST00000516543 PTCD3Q96EY7 689 aaKnown RBP3.32□□□□□ -1.88
SNORA40.14-201ENST00000516543 BOD1Q96IK1 185 aa3.32□□□□□ -1.88
SNORA40.14-201ENST00000516543 RAX2Q96IS3 184 aa3.32□□□□□ -1.88
SNORA40.14-201ENST00000516543 ACAP3Q96P50 834 aa3.32□□□□□ -1.88
SNORA40.14-201ENST00000516543 SENP6Q9GZR1 1112 aaPredicted RBP3.32□□□□□ -1.88
SNORA40.14-201ENST00000516543 RNPEPQ9H4A4 650 aa3.32□□□□□ -1.88
SNORA40.14-201ENST00000516543 IFT22Q9H7X7 185 aa3.32□□□□□ -1.88
SNORA40.14-201ENST00000516543 TBCCD1Q9NVR7 557 aa3.32□□□□□ -1.88
SNORA40.14-201ENST00000516543 VSX1Q9NZR4 365 aaPredicted RBP3.32□□□□□ -1.88
SNORA40.14-201ENST00000516543 RNF7Q9UBF6 113 aa3.32□□□□□ -1.88
SNORA40.14-201ENST00000516543 RUVBL1Q9Y265 456 aaKnown RBP3.32□□□□□ -1.88
SNORA40.14-201ENST00000516543 DNAJC9-AS1A6NH13 148 aa3.31□□□□□ -1.88
SNORA40.14-201ENST00000516543 ERBB2P04626 1255 aa3.31□□□□□ -1.88
SNORA40.14-201ENST00000516543 AMY1AP04745 511 aa3.31□□□□□ -1.88
SNORA40.14-201ENST00000516543 ABCG1P45844 678 aa3.31□□□□□ -1.88
SNORA40.14-201ENST00000516543 VAV2P52735 878 aa3.31□□□□□ -1.88
SNORA40.14-201ENST00000516543 CACNA2D1P54289 1103 aa3.31□□□□□ -1.88
SNORA40.14-201ENST00000516543 SESN3P58005 492 aa3.31□□□□□ -1.88
SNORA40.14-201ENST00000516543 MRPS9P82933 396 aaKnown RBP3.31□□□□□ -1.88
SNORA40.14-201ENST00000516543 SRSF2Q01130 221 aaKnown RBP3.31□□□□□ -1.88
SNORA40.14-201ENST00000516543 NHLH1Q02575 133 aa3.31□□□□□ -1.88
SNORA40.14-201ENST00000516543 DHCR24Q15392 516 aa3.31□□□□□ -1.88
SNORA40.14-201ENST00000516543 OTUD7BQ6GQQ9 843 aa3.31□□□□□ -1.88
SNORA40.14-201ENST00000516543 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.31□□□□□ -1.88
SNORA40.14-201ENST00000516543 THNSL2Q86YJ6 484 aa3.31□□□□□ -1.88
SNORA40.14-201ENST00000516543 ZGPATQ8N5A5 531 aaKnown RBP3.31□□□□□ -1.88
SNORA40.14-201ENST00000516543 Q8NA96 180 aa3.31□□□□□ -1.88
SNORA40.14-201ENST00000516543 CCHCR1Q8TD31 782 aa3.31□□□□□ -1.88
SNORA40.14-201ENST00000516543 SSH3Q8TE77 659 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms