RNA–Protein interactions for RNA: ENST00000516227.1

RN7SKP288-201, Transcript of RNA, 7SK small nuclear pseudogene 288, humanhuman

BASIC

Gene RN7SKP288, Length 268 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP288-201ENST00000516227 PDCL3Q9H2J4 239 aa6.42□□□□□ -1.38
RN7SKP288-201ENST00000516227 IFT122Q9HBG6 1241 aa6.42□□□□□ -1.38
RN7SKP288-201ENST00000516227 PUF60Q9UHX1 559 aaKnown RBP6.42□□□□□ -1.38
RN7SKP288-201ENST00000516227 CDC23Q9UJX2 597 aa6.42□□□□□ -1.38
RN7SKP288-201ENST00000516227 NAGPAQ9UK23 515 aa6.42□□□□□ -1.38
RN7SKP288-201ENST00000516227 TNFSF13BQ9Y275 285 aa6.42□□□□□ -1.38
RN7SKP288-201ENST00000516227 Q9Y3F1 56 aa6.42□□□□□ -1.38
RN7SKP288-201ENST00000516227 PCDHB4Q9Y5E5 795 aa6.42□□□□□ -1.38
RN7SKP288-201ENST00000516227 MRFAP1Q9Y605 127 aa6.42□□□□□ -1.38
RN7SKP288-201ENST00000516227 PTPRJQ12913 1337 aa6.42□□□□□ -1.38
RN7SKP288-201ENST00000516227 NRCAMQ92823 1304 aa6.42□□□□□ -1.38
RN7SKP288-201ENST00000516227 CNTNAP2Q9UHC6 1331 aa6.42□□□□□ -1.38
RN7SKP288-201ENST00000516227 DENND4CQ5VZ89 1909 aa6.42□□□□□ -1.38
RN7SKP288-201ENST00000516227 SMIM35A0A1B0GVV1 85 aa6.41□□□□□ -1.38
RN7SKP288-201ENST00000516227 LACTBL1A8MY62 500 aa6.41□□□□□ -1.38
RN7SKP288-201ENST00000516227 M0QZ92 97 aa6.41□□□□□ -1.38
RN7SKP288-201ENST00000516227 GPR25O00155 361 aa6.41□□□□□ -1.38
RN7SKP288-201ENST00000516227 DDX3XO00571 662 aaKnown RBP eCLIP6.41□□□□□ -1.38
RN7SKP288-201ENST00000516227 FANCGO15287 622 aa6.41□□□□□ -1.38
RN7SKP288-201ENST00000516227 TREHO43280 583 aa6.41□□□□□ -1.38
RN7SKP288-201ENST00000516227 RTN2O75298 545 aa6.41□□□□□ -1.38
RN7SKP288-201ENST00000516227 DUSP11O75319 330 aaKnown RBP6.41□□□□□ -1.38
RN7SKP288-201ENST00000516227 TRPA1O75762 1119 aa6.41□□□□□ -1.38
RN7SKP288-201ENST00000516227 VNN1O95497 513 aa6.41□□□□□ -1.38
RN7SKP288-201ENST00000516227 NPTXRO95502 500 aa6.41□□□□□ -1.38
RN7SKP288-201ENST00000516227 F2P00734 622 aa6.41□□□□□ -1.38
RN7SKP288-201ENST00000516227 ATP1A1P05023 1023 aaKnown RBP6.41□□□□□ -1.38
RN7SKP288-201ENST00000516227 IQCF3P0C7M6 154 aa6.41□□□□□ -1.38
RN7SKP288-201ENST00000516227 STAG3L1P0CL83 205 aa6.41□□□□□ -1.38
RN7SKP288-201ENST00000516227 CXCL8P10145 99 aa6.41□□□□□ -1.38
RN7SKP288-201ENST00000516227 RARBP10826 455 aa6.41□□□□□ -1.38
RN7SKP288-201ENST00000516227 MCF2P10911 925 aa6.41□□□□□ -1.38
RN7SKP288-201ENST00000516227 GNAT1P11488 350 aa6.41□□□□□ -1.38
RN7SKP288-201ENST00000516227 ARF4P18085 180 aaPredicted RBP6.41□□□□□ -1.38
RN7SKP288-201ENST00000516227 ABCB4P21439 1286 aa6.41□□□□□ -1.38
RN7SKP288-201ENST00000516227 TBXAS1P24557 533 aaPredicted RBP6.41□□□□□ -1.38
RN7SKP288-201ENST00000516227 GALCP54803 685 aa6.41□□□□□ -1.38
RN7SKP288-201ENST00000516227 MCCD1P59942 119 aaPredicted RBP6.41□□□□□ -1.38
RN7SKP288-201ENST00000516227 CLDN10P78369 228 aa6.41□□□□□ -1.38
RN7SKP288-201ENST00000516227 RBM10P98175 930 aaKnown RBP6.41□□□□□ -1.38
RN7SKP288-201ENST00000516227 PRKCZQ05513 592 aa6.41□□□□□ -1.38
RN7SKP288-201ENST00000516227 NCOA4Q13772 614 aa6.41□□□□□ -1.38
RN7SKP288-201ENST00000516227 FAM187BQ17R55 369 aa6.41□□□□□ -1.38
RN7SKP288-201ENST00000516227 DUOXA2Q1HG44 320 aa6.41□□□□□ -1.38
RN7SKP288-201ENST00000516227 TEX35Q5T0J7 233 aa6.41□□□□□ -1.38
RN7SKP288-201ENST00000516227 SPOPLQ6IQ16 392 aa6.41□□□□□ -1.38
RN7SKP288-201ENST00000516227 RUFY4Q6ZNE9 571 aa6.41□□□□□ -1.38
RN7SKP288-201ENST00000516227 C15orf39Q6ZRI6 1047 aa6.41□□□□□ -1.38
RN7SKP288-201ENST00000516227 TRAPPC11Q7Z392 1133 aa6.41□□□□□ -1.38
RN7SKP288-201ENST00000516227 DNAAF5Q86Y56 855 aa6.41□□□□□ -1.38
RN7SKP288-201ENST00000516227 IFNLR1Q8IU57 520 aaPredicted RBP6.41□□□□□ -1.38
RN7SKP288-201ENST00000516227 RNF10Q8N5U6 811 aaKnown RBP6.41□□□□□ -1.38
RN7SKP288-201ENST00000516227 CEP112Q8N8E3 955 aa6.41□□□□□ -1.38
RN7SKP288-201ENST00000516227 CEP120Q8N960 986 aa6.41□□□□□ -1.38
RN7SKP288-201ENST00000516227 TRPV1Q8NER1 839 aa6.41□□□□□ -1.38
RN7SKP288-201ENST00000516227 OR5B17Q8NGF7 314 aa6.41□□□□□ -1.38
RN7SKP288-201ENST00000516227 HELQQ8TDG4 1101 aa6.41□□□□□ -1.38
RN7SKP288-201ENST00000516227 CTNNBL1Q8WYA6 563 aaPredicted RBP6.41□□□□□ -1.38
RN7SKP288-201ENST00000516227 TRIB2Q92519 343 aa6.41□□□□□ -1.38
RN7SKP288-201ENST00000516227 SHC3Q92529 594 aa6.41□□□□□ -1.38
RN7SKP288-201ENST00000516227 UBXN4Q92575 508 aa6.41□□□□□ -1.38
RN7SKP288-201ENST00000516227 DHX38Q92620 1227 aaKnown RBP6.41□□□□□ -1.38
RN7SKP288-201ENST00000516227 KAT2BQ92831 832 aa6.41□□□□□ -1.38
RN7SKP288-201ENST00000516227 CAPZA3Q96KX2 299 aa6.41□□□□□ -1.38
RN7SKP288-201ENST00000516227 ACAP3Q96P50 834 aa6.41□□□□□ -1.38
RN7SKP288-201ENST00000516227 OSMRQ99650 979 aa6.41□□□□□ -1.38
RN7SKP288-201ENST00000516227 MTG1Q9BT17 334 aaPredicted RBP6.41□□□□□ -1.38
RN7SKP288-201ENST00000516227 CCDC94Q9BW85 323 aaPredicted RBP6.41□□□□□ -1.38
RN7SKP288-201ENST00000516227 TRIM6Q9C030 488 aaPredicted RBP6.41□□□□□ -1.38
RN7SKP288-201ENST00000516227 MTMR12Q9C0I1 747 aa6.41□□□□□ -1.38
RN7SKP288-201ENST00000516227 GPR88Q9GZN0 384 aa6.41□□□□□ -1.38
RN7SKP288-201ENST00000516227 PDZD7Q9H5P4 517 aa6.41□□□□□ -1.38
RN7SKP288-201ENST00000516227 L2HGDHQ9H9P8 463 aa6.41□□□□□ -1.38
RN7SKP288-201ENST00000516227 HDAC6Q9UBN7 1215 aa6.41□□□□□ -1.38
RN7SKP288-201ENST00000516227 CPSF3Q9UKF6 684 aaKnown RBP6.41□□□□□ -1.38
RN7SKP288-201ENST00000516227 SAR1BQ9Y6B6 198 aa6.41□□□□□ -1.38
RN7SKP288-201ENST00000516227 CAPN6Q9Y6Q1 641 aa6.41□□□□□ -1.38
RN7SKP288-201ENST00000516227 ANKRD36A6QL64 1941 aa6.4□□□□□ -1.38
RN7SKP288-201ENST00000516227 MTCL1Q9Y4B5 1905 aaKnown RBP6.4□□□□□ -1.38
RN7SKP288-201ENST00000516227 ANO9A1A5B4 782 aa6.4□□□□□ -1.38
RN7SKP288-201ENST00000516227 CTAGE15A4D2H0 777 aa6.4□□□□□ -1.38
RN7SKP288-201ENST00000516227 MYADML2A6NDP7 307 aa6.4□□□□□ -1.38
RN7SKP288-201ENST00000516227 HAS3O00219 553 aa6.4□□□□□ -1.38
RN7SKP288-201ENST00000516227 ABLIM1O14639 778 aa6.4□□□□□ -1.38
RN7SKP288-201ENST00000516227 CTIFO43310 598 aaKnown RBP6.4□□□□□ -1.38
RN7SKP288-201ENST00000516227 TSPAN1O60635 241 aa6.4□□□□□ -1.38
RN7SKP288-201ENST00000516227 PALMO75781 387 aa6.4□□□□□ -1.38
RN7SKP288-201ENST00000516227 PGK1P00558 417 aa6.4□□□□□ -1.38
RN7SKP288-201ENST00000516227 CALCAP01258 141 aa6.4□□□□□ -1.38
RN7SKP288-201ENST00000516227 MMEP08473 750 aa6.4□□□□□ -1.38
RN7SKP288-201ENST00000516227 CLTAP09496 248 aa6.4□□□□□ -1.38
RN7SKP288-201ENST00000516227 CTAGE8P0CG41 777 aa6.4□□□□□ -1.38
RN7SKP288-201ENST00000516227 CYBAP13498 195 aa6.4□□□□□ -1.38
RN7SKP288-201ENST00000516227 ELNP15502 786 aa6.4□□□□□ -1.38
RN7SKP288-201ENST00000516227 PROZP22891 400 aa6.4□□□□□ -1.38
RN7SKP288-201ENST00000516227 CCND3P30281 292 aaPredicted RBP6.4□□□□□ -1.38
RN7SKP288-201ENST00000516227 DNA2P51530 1060 aa6.4□□□□□ -1.38
RN7SKP288-201ENST00000516227 APLP1P51693 650 aa6.4□□□□□ -1.38
RN7SKP288-201ENST00000516227 GJA9P57773 515 aa6.4□□□□□ -1.38
RN7SKP288-201ENST00000516227 BPIFB4P59827 614 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms