RNA–Protein interactions for RNA: ENST00000515791.1

SFXN1-212, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-212ENST00000515791 RSPO2Q6UXX9 243 aaPredicted RBP19.36■□□□□ 0.69
SFXN1-212ENST00000515791 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.36■□□□□ 0.69
SFXN1-212ENST00000515791 CCDC149Q6ZUS6 474 aa19.36■□□□□ 0.69
SFXN1-212ENST00000515791 RAD54LQ92698 747 aa19.36■□□□□ 0.69
SFXN1-212ENST00000515791 PBXIP1Q96AQ6 731 aa19.36■□□□□ 0.69
SFXN1-212ENST00000515791 FAM122AQ96E09 287 aa19.36■□□□□ 0.69
SFXN1-212ENST00000515791 CALML4Q96GE6 196 aa19.36■□□□□ 0.69
SFXN1-212ENST00000515791 EPSTI1Q96J88 318 aa19.36■□□□□ 0.69
SFXN1-212ENST00000515791 UROC1Q96N76 676 aa19.36■□□□□ 0.69
SFXN1-212ENST00000515791 ACAP3Q96P50 834 aa19.36■□□□□ 0.69
SFXN1-212ENST00000515791 TOPORSQ9NS56 1045 aaPredicted RBP19.36■□□□□ 0.69
SFXN1-212ENST00000515791 ZDHHC7Q9NXF8 308 aa19.36■□□□□ 0.69
SFXN1-212ENST00000515791 LARSQ9P2J5 1176 aaKnown RBP19.36■□□□□ 0.69
SFXN1-212ENST00000515791 FBXO2Q9UK22 296 aaPredicted RBP19.36■□□□□ 0.69
SFXN1-212ENST00000515791 FBXW11Q9UKB1 542 aa19.36■□□□□ 0.69
SFXN1-212ENST00000515791 MTMR6Q9Y217 621 aa19.36■□□□□ 0.69
SFXN1-212ENST00000515791 FAM189A1O60320 539 aa19.35■□□□□ 0.69
SFXN1-212ENST00000515791 ZMYND10O75800 440 aa19.35■□□□□ 0.69
SFXN1-212ENST00000515791 B3GAT3O94766 335 aa19.35■□□□□ 0.69
SFXN1-212ENST00000515791 PSMD5Q16401 504 aa19.35■□□□□ 0.69
SFXN1-212ENST00000515791 SEZ6Q53EL9 994 aa19.35■□□□□ 0.69
SFXN1-212ENST00000515791 HAUS6Q7Z4H7 955 aa19.35■□□□□ 0.69
SFXN1-212ENST00000515791 GPBP1Q86WP2 473 aa19.35■□□□□ 0.69
SFXN1-212ENST00000515791 CEP57Q86XR8 500 aa19.35■□□□□ 0.69
SFXN1-212ENST00000515791 PRKD2Q9BZL6 878 aa19.35■□□□□ 0.69
SFXN1-212ENST00000515791 KCNH6Q9H252 994 aa19.35■□□□□ 0.69
SFXN1-212ENST00000515791 MUC6Q6W4X9 2439 aa19.35■□□□□ 0.69
SFXN1-212ENST00000515791 PDGFBP01127 241 aaPredicted RBP19.34■□□□□ 0.69
SFXN1-212ENST00000515791 PIGRP01833 764 aa19.34■□□□□ 0.69
SFXN1-212ENST00000515791 BRCC3P46736 316 aa19.34■□□□□ 0.69
SFXN1-212ENST00000515791 YARSP54577 528 aaKnown RBP19.34■□□□□ 0.69
SFXN1-212ENST00000515791 STRN3Q13033 797 aa19.34■□□□□ 0.69
SFXN1-212ENST00000515791 MTMR3Q13615 1198 aa19.34■□□□□ 0.69
SFXN1-212ENST00000515791 NOLC1Q14978 699 aaKnown RBP eCLIP19.34■□□□□ 0.69
SFXN1-212ENST00000515791 OTOP3Q7RTS5 596 aa19.34■□□□□ 0.69
SFXN1-212ENST00000515791 UBALD2Q8IYN6 164 aa19.34■□□□□ 0.69
SFXN1-212ENST00000515791 FBXL6Q8N531 539 aa19.34■□□□□ 0.69
SFXN1-212ENST00000515791 C18orf25Q96B23 403 aaPredicted RBP19.34■□□□□ 0.69
SFXN1-212ENST00000515791 DDX27Q96GQ7 796 aaKnown RBP19.34■□□□□ 0.69
SFXN1-212ENST00000515791 TCHPQ9BT92 498 aa19.34■□□□□ 0.69
SFXN1-212ENST00000515791 MTRRQ9UBK8 725 aa19.34■□□□□ 0.69
SFXN1-212ENST00000515791 SRPRBQ9Y5M8 271 aaKnown RBP19.34■□□□□ 0.69
SFXN1-212ENST00000515791 MORC2Q9Y6X9 1032 aaPredicted RBP19.34■□□□□ 0.69
SFXN1-212ENST00000515791 CLUHO75153 1309 aa19.33■□□□□ 0.69
SFXN1-212ENST00000515791 DOCK8Q8NF50 2099 aa19.33■□□□□ 0.69
SFXN1-212ENST00000515791 SPDYE4A6NLX3 237 aa19.33■□□□□ 0.68
SFXN1-212ENST00000515791 I3L4J1 428 aa19.33■□□□□ 0.68
SFXN1-212ENST00000515791 HARSP12081 509 aaKnown RBP19.33■□□□□ 0.68
SFXN1-212ENST00000515791 TKTP29401 623 aaKnown RBP19.33■□□□□ 0.68
SFXN1-212ENST00000515791 DDIT3P35638 169 aa19.33■□□□□ 0.68
SFXN1-212ENST00000515791 RAB33AQ14088 237 aa19.33■□□□□ 0.68
SFXN1-212ENST00000515791 DHX8Q14562 1220 aaKnown RBP19.33■□□□□ 0.68
SFXN1-212ENST00000515791 SPECC1Q5M775 1068 aa19.33■□□□□ 0.68
SFXN1-212ENST00000515791 IER5LQ5T953 404 aa19.33■□□□□ 0.68
SFXN1-212ENST00000515791 TMEM130Q8N3G9 435 aa19.33■□□□□ 0.68
SFXN1-212ENST00000515791 SMG7Q92540 1137 aaKnown RBP19.33■□□□□ 0.68
SFXN1-212ENST00000515791 LARP4BQ92615 738 aaKnown RBP19.33■□□□□ 0.68
SFXN1-212ENST00000515791 ACSF2Q96CM8 615 aaPredicted RBP19.33■□□□□ 0.68
SFXN1-212ENST00000515791 ANKFY1Q9P2R3 1169 aa19.33■□□□□ 0.68
SFXN1-212ENST00000515791 BACE2Q9Y5Z0 518 aa19.33■□□□□ 0.68
SFXN1-212ENST00000515791 K7ELQ4 463 aaPredicted RBP19.32■□□□□ 0.68
SFXN1-212ENST00000515791 PODXLO00592 558 aa19.32■□□□□ 0.68
SFXN1-212ENST00000515791 CLDN3O15551 220 aa19.32■□□□□ 0.68
SFXN1-212ENST00000515791 TBC1D4O60343 1298 aa19.32■□□□□ 0.68
SFXN1-212ENST00000515791 ADRB2P07550 413 aa19.32■□□□□ 0.68
SFXN1-212ENST00000515791 MARCKSP29966 332 aaPredicted RBP19.32■□□□□ 0.68
SFXN1-212ENST00000515791 MRPL58Q14197 206 aaKnown RBP19.32■□□□□ 0.68
SFXN1-212ENST00000515791 ZBTB6Q15916 424 aa19.32■□□□□ 0.68
SFXN1-212ENST00000515791 SLC39A4Q6P5W5 647 aa19.32■□□□□ 0.68
SFXN1-212ENST00000515791 PDXDC1Q6P996 788 aa19.32■□□□□ 0.68
SFXN1-212ENST00000515791 ELMSAN1Q6PJG2 1045 aa19.32■□□□□ 0.68
SFXN1-212ENST00000515791 CLIC6Q96NY7 704 aa19.32■□□□□ 0.68
SFXN1-212ENST00000515791 MYADMQ96S97 322 aa19.32■□□□□ 0.68
SFXN1-212ENST00000515791 KCNK12Q9HB15 430 aa19.32■□□□□ 0.68
SFXN1-212ENST00000515791 PARVGQ9HBI0 331 aa19.32■□□□□ 0.68
SFXN1-212ENST00000515791 SLC38A7Q9NVC3 462 aa19.32■□□□□ 0.68
SFXN1-212ENST00000515791 EPS15L1Q9UBC2 864 aa19.32■□□□□ 0.68
SFXN1-212ENST00000515791 TBX20Q9UMR3 447 aa19.32■□□□□ 0.68
SFXN1-212ENST00000515791 DOCK6Q96HP0 2047 aa19.32■□□□□ 0.68
SFXN1-212ENST00000515791 TTC26A0AVF1 554 aa19.31■□□□□ 0.68
SFXN1-212ENST00000515791 H0YCG3 227 aa19.31■□□□□ 0.68
SFXN1-212ENST00000515791 TRAK2O60296 914 aa19.31■□□□□ 0.68
SFXN1-212ENST00000515791 HOXD11P31277 338 aaPredicted RBP19.31■□□□□ 0.68
SFXN1-212ENST00000515791 OR1D2P34982 312 aa19.31■□□□□ 0.68
SFXN1-212ENST00000515791 TNFSF9P41273 254 aa19.31■□□□□ 0.68
SFXN1-212ENST00000515791 VCPP55072 806 aaKnown RBP19.31■□□□□ 0.68
SFXN1-212ENST00000515791 GTF2BQ00403 316 aa19.31■□□□□ 0.68
SFXN1-212ENST00000515791 ZBTB41Q5SVQ8 909 aa19.31■□□□□ 0.68
SFXN1-212ENST00000515791 MYCT1Q8N699 235 aa19.31■□□□□ 0.68
SFXN1-212ENST00000515791 PRSS33Q8NF86 280 aa19.31■□□□□ 0.68
SFXN1-212ENST00000515791 USP28Q96RU2 1077 aa19.31■□□□□ 0.68
SFXN1-212ENST00000515791 NOTCH4Q99466 2003 aa19.3■□□□□ 0.68
SFXN1-212ENST00000515791 CXCL8P10145 99 aa19.3■□□□□ 0.68
SFXN1-212ENST00000515791 SCP2P22307 547 aa19.3■□□□□ 0.68
SFXN1-212ENST00000515791 NMT1P30419 496 aaKnown RBP19.3■□□□□ 0.68
SFXN1-212ENST00000515791 HOXA9P31269 272 aa19.3■□□□□ 0.68
SFXN1-212ENST00000515791 RPL9P32969 192 aaKnown RBP19.3■□□□□ 0.68
SFXN1-212ENST00000515791 SNX21Q969T3 373 aa19.3■□□□□ 0.68
SFXN1-212ENST00000515791 ST6GALNAC4Q9H4F1 302 aa19.3■□□□□ 0.68
SFXN1-212ENST00000515791 PLEKHA5Q9HAU0 1116 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms