RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 FNIP2Q9P278 1114 aa13.95□□□□□ -0.18
CLCN3-210ENST00000515420 EXOC7Q9UPT5 735 aa13.95□□□□□ -0.18
CLCN3-210ENST00000515420 PCDHB13Q9Y5F0 798 aa13.95□□□□□ -0.18
CLCN3-210ENST00000515420 VWA8A3KMH1 1905 aa13.94□□□□□ -0.18
CLCN3-210ENST00000515420 MTCL1Q9Y4B5 1905 aaKnown RBP13.94□□□□□ -0.18
CLCN3-210ENST00000515420 TTC26A0AVF1 554 aa13.94□□□□□ -0.18
CLCN3-210ENST00000515420 F8W810 466 aa13.94□□□□□ -0.18
CLCN3-210ENST00000515420 KIF4AO95239 1232 aa13.94□□□□□ -0.18
CLCN3-210ENST00000515420 ADH1AP07327 375 aa13.94□□□□□ -0.18
CLCN3-210ENST00000515420 ADRB2P07550 413 aa13.94□□□□□ -0.18
CLCN3-210ENST00000515420 CNPP09543 421 aaKnown RBP13.94□□□□□ -0.18
CLCN3-210ENST00000515420 HARSP12081 509 aaKnown RBP13.94□□□□□ -0.18
CLCN3-210ENST00000515420 IDEP14735 1019 aa13.94□□□□□ -0.18
CLCN3-210ENST00000515420 RPL9P32969 192 aaKnown RBP13.94□□□□□ -0.18
CLCN3-210ENST00000515420 CLCN4P51793 760 aa13.94□□□□□ -0.18
CLCN3-210ENST00000515420 ITIH3Q06033 890 aa13.94□□□□□ -0.18
CLCN3-210ENST00000515420 POSTNQ15063 836 aa13.94□□□□□ -0.18
CLCN3-210ENST00000515420 UPP1Q16831 310 aa13.94□□□□□ -0.18
CLCN3-210ENST00000515420 SLC10A6Q3KNW5 377 aa13.94□□□□□ -0.18
CLCN3-210ENST00000515420 ZC2HC1CQ53FD0 456 aaPredicted RBP13.94□□□□□ -0.18
CLCN3-210ENST00000515420 HERC4Q5GLZ8 1057 aaPredicted RBP13.94□□□□□ -0.18
CLCN3-210ENST00000515420 L1TD1Q5T7N2 865 aaKnown RBP13.94□□□□□ -0.18
CLCN3-210ENST00000515420 KIAA1841Q6NSI8 718 aa13.94□□□□□ -0.18
CLCN3-210ENST00000515420 SLC39A4Q6P5W5 647 aa13.94□□□□□ -0.18
CLCN3-210ENST00000515420 STXBP4Q6ZWJ1 553 aa13.94□□□□□ -0.18
CLCN3-210ENST00000515420 ADHFE1Q8IWW8 467 aa13.94□□□□□ -0.18
CLCN3-210ENST00000515420 CD302Q8IX05 232 aa13.94□□□□□ -0.18
CLCN3-210ENST00000515420 SLC22A17Q8WUG5 538 aa13.94□□□□□ -0.18
CLCN3-210ENST00000515420 LEO1Q8WVC0 666 aaPredicted RBP13.94□□□□□ -0.18
CLCN3-210ENST00000515420 SUSD6Q92537 303 aa13.94□□□□□ -0.18
CLCN3-210ENST00000515420 DHX58Q96C10 678 aa13.94□□□□□ -0.18
CLCN3-210ENST00000515420 SPATA32Q96LK8 384 aa13.94□□□□□ -0.18
CLCN3-210ENST00000515420 KLHL5Q96PQ7 755 aa13.94□□□□□ -0.18
CLCN3-210ENST00000515420 DPP7Q9UHL4 492 aa13.94□□□□□ -0.18
CLCN3-210ENST00000515420 BDP1A6H8Y1 2624 aa13.94□□□□□ -0.18
CLCN3-210ENST00000515420 ANK1P16157 1881 aa13.93□□□□□ -0.18
CLCN3-210ENST00000515420 C5orf42Q9H799 3197 aa13.93□□□□□ -0.18
CLCN3-210ENST00000515420 POLR2DO15514 142 aaKnown RBP13.93□□□□□ -0.18
CLCN3-210ENST00000515420 MEFVO15553 781 aaPredicted RBP13.93□□□□□ -0.18
CLCN3-210ENST00000515420 TRAPPC3O43617 180 aa13.93□□□□□ -0.18
CLCN3-210ENST00000515420 CXCL8P10145 99 aa13.93□□□□□ -0.18
CLCN3-210ENST00000515420 CMA1P23946 247 aa13.93□□□□□ -0.18
CLCN3-210ENST00000515420 KLRC2P26717 231 aa13.93□□□□□ -0.18
CLCN3-210ENST00000515420 CLCNKBP51801 687 aa13.93□□□□□ -0.18
CLCN3-210ENST00000515420 NUCB2P80303 420 aa13.93□□□□□ -0.18
CLCN3-210ENST00000515420 RBM10P98175 930 aaKnown RBP13.93□□□□□ -0.18
CLCN3-210ENST00000515420 ZP2Q05996 745 aa13.93□□□□□ -0.18
CLCN3-210ENST00000515420 PPP2R3AQ06190 1150 aa13.93□□□□□ -0.18
CLCN3-210ENST00000515420 SOX4Q06945 474 aaPredicted RBP13.93□□□□□ -0.18
CLCN3-210ENST00000515420 CLUL1Q15846 466 aa13.93□□□□□ -0.18
CLCN3-210ENST00000515420 LLGL2Q6P1M3 1020 aa13.93□□□□□ -0.18
CLCN3-210ENST00000515420 SYCE2Q6PIF2 218 aa13.93□□□□□ -0.18
CLCN3-210ENST00000515420 ELMSAN1Q6PJG2 1045 aa13.93□□□□□ -0.18
CLCN3-210ENST00000515420 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.93□□□□□ -0.18
CLCN3-210ENST00000515420 TAS1R1Q7RTX1 841 aa13.93□□□□□ -0.18
CLCN3-210ENST00000515420 PIK3R5Q8WYR1 880 aa13.93□□□□□ -0.18
CLCN3-210ENST00000515420 ZMAT2Q96NC0 199 aaKnown RBP13.93□□□□□ -0.18
CLCN3-210ENST00000515420 ACCSQ96QU6 501 aa13.93□□□□□ -0.18
CLCN3-210ENST00000515420 C7orf25Q9BPX7 421 aa13.93□□□□□ -0.18
CLCN3-210ENST00000515420 TTPALQ9BTX7 342 aa13.93□□□□□ -0.18
CLCN3-210ENST00000515420 MSTO1Q9BUK6 570 aa13.93□□□□□ -0.18
CLCN3-210ENST00000515420 S1PR5Q9H228 398 aa13.93□□□□□ -0.18
CLCN3-210ENST00000515420 USP25Q9UHP3 1055 aa13.93□□□□□ -0.18
CLCN3-210ENST00000515420 KCNH3Q9ULD8 1083 aa13.93□□□□□ -0.18
CLCN3-210ENST00000515420 USP15Q9Y4E8 981 aaPredicted RBP13.93□□□□□ -0.18
CLCN3-210ENST00000515420 PLXNA3P51805 1871 aa13.93□□□□□ -0.18
CLCN3-210ENST00000515420 C19orf67A6NJJ6 358 aa13.92□□□□□ -0.18
CLCN3-210ENST00000515420 TEX28O15482 410 aa13.92□□□□□ -0.18
CLCN3-210ENST00000515420 XPOTO43592 962 aaKnown RBP13.92□□□□□ -0.18
CLCN3-210ENST00000515420 B3GAT3O94766 335 aa13.92□□□□□ -0.18
CLCN3-210ENST00000515420 GCNT3O95395 438 aa13.92□□□□□ -0.18
CLCN3-210ENST00000515420 CYP3A5P20815 502 aa13.92□□□□□ -0.18
CLCN3-210ENST00000515420 ASIC1P78348 528 aa13.92□□□□□ -0.18
CLCN3-210ENST00000515420 HDAC7Q8WUI4 952 aa13.92□□□□□ -0.18
CLCN3-210ENST00000515420 NECAB3Q96P71 396 aaPredicted RBP13.92□□□□□ -0.18
CLCN3-210ENST00000515420 ADAM7Q9H2U9 754 aa13.92□□□□□ -0.18
CLCN3-210ENST00000515420 ASB7Q9H672 318 aa13.92□□□□□ -0.18
CLCN3-210ENST00000515420 TMEM206Q9H813 350 aa13.92□□□□□ -0.18
CLCN3-210ENST00000515420 RPF1Q9H9Y2 349 aaKnown RBP13.92□□□□□ -0.18
CLCN3-210ENST00000515420 CACNG4Q9UBN1 327 aa13.92□□□□□ -0.18
CLCN3-210ENST00000515420 CPSF3Q9UKF6 684 aaKnown RBP13.92□□□□□ -0.18
CLCN3-210ENST00000515420 UBQLN1Q9UMX0 589 aaKnown RBP13.92□□□□□ -0.18
CLCN3-210ENST00000515420 DERAQ9Y315 318 aa13.92□□□□□ -0.18
CLCN3-210ENST00000515420 FAM237AA0A1B0GTK4 181 aa13.91□□□□□ -0.18
CLCN3-210ENST00000515420 PVALEFA0A1B0GWK0 134 aa13.91□□□□□ -0.18
CLCN3-210ENST00000515420 ANKRD63C9JTQ0 380 aa13.91□□□□□ -0.18
CLCN3-210ENST00000515420 PODXLO00592 558 aa13.91□□□□□ -0.18
CLCN3-210ENST00000515420 C2CD2LO14523 706 aa13.91□□□□□ -0.18
CLCN3-210ENST00000515420 EIF3DO15371 548 aaKnown RBP eCLIP13.91□□□□□ -0.18
CLCN3-210ENST00000515420 PAPLNO95428 1278 aa13.91□□□□□ -0.18
CLCN3-210ENST00000515420 GLUD1P00367 558 aa13.91□□□□□ -0.18
CLCN3-210ENST00000515420 MYL1P05976 194 aa13.91□□□□□ -0.18
CLCN3-210ENST00000515420 SLFN14P0C7P3 912 aa13.91□□□□□ -0.18
CLCN3-210ENST00000515420 EPCAMP16422 314 aa13.91□□□□□ -0.18
CLCN3-210ENST00000515420 FGFR3P22607 806 aa13.91□□□□□ -0.18
CLCN3-210ENST00000515420 LRPAP1P30533 357 aa13.91□□□□□ -0.18
CLCN3-210ENST00000515420 TNFSF9P41273 254 aa13.91□□□□□ -0.18
CLCN3-210ENST00000515420 EHHADHQ08426 723 aa13.91□□□□□ -0.18
CLCN3-210ENST00000515420 CBX2Q14781 532 aaPredicted RBP13.91□□□□□ -0.18
CLCN3-210ENST00000515420 ZBTB6Q15916 424 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms