RNA–Protein interactions for RNA: ENST00000515233.5

DDR1-278, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-278ENST00000515233 KCNG4Q8TDN1 519 aa16.53■□□□□ 0.24
DDR1-278ENST00000515233 C8orf76Q96K31 380 aa16.53■□□□□ 0.24
DDR1-278ENST00000515233 LLPHQ9BRT6 129 aaKnown RBP16.53■□□□□ 0.24
DDR1-278ENST00000515233 BHMT2Q9H2M3 363 aa16.53■□□□□ 0.24
DDR1-278ENST00000515233 CDY1Q9Y6F8 540 aa16.53■□□□□ 0.24
DDR1-278ENST00000515233 R4GN57 208 aa16.53■□□□□ 0.24
DDR1-278ENST00000515233 SMIM28A0A1B0GU29 152 aa16.52■□□□□ 0.24
DDR1-278ENST00000515233 IGFBP6P24592 240 aaPredicted RBP16.52■□□□□ 0.24
DDR1-278ENST00000515233 TRAPPC10P48553 1259 aa16.52■□□□□ 0.24
DDR1-278ENST00000515233 PFKPQ01813 784 aa16.52■□□□□ 0.24
DDR1-278ENST00000515233 SNW1Q13573 536 aaKnown RBP16.52■□□□□ 0.24
DDR1-278ENST00000515233 MLF2Q15773 248 aaPredicted RBP16.52■□□□□ 0.24
DDR1-278ENST00000515233 PABPC1LQ4VXU2 614 aaKnown RBP16.52■□□□□ 0.24
DDR1-278ENST00000515233 C4orf32Q8N8J7 132 aa16.52■□□□□ 0.24
DDR1-278ENST00000515233 FBXO18Q8NFZ0 1043 aa16.52■□□□□ 0.24
DDR1-278ENST00000515233 ZNF461Q8TAF7 563 aa16.52■□□□□ 0.24
DDR1-278ENST00000515233 KIFC3Q9BVG8 833 aa16.52■□□□□ 0.24
DDR1-278ENST00000515233 FOXQ1Q9C009 403 aa16.52■□□□□ 0.24
DDR1-278ENST00000515233 POLD4Q9HCU8 107 aa16.52■□□□□ 0.24
DDR1-278ENST00000515233 AVENQ9NQS1 362 aaPredicted RBP16.52■□□□□ 0.24
DDR1-278ENST00000515233 STK24Q9Y6E0 443 aa16.52■□□□□ 0.24
DDR1-278ENST00000515233 ZNF292O60281 2723 aa16.51■□□□□ 0.23
DDR1-278ENST00000515233 CCT6AP40227 531 aaKnown RBP16.51■□□□□ 0.23
DDR1-278ENST00000515233 GRM5P41594 1212 aa16.51■□□□□ 0.23
DDR1-278ENST00000515233 ZNF528Q3MIS6 628 aa16.51■□□□□ 0.23
DDR1-278ENST00000515233 GLRA4Q5JXX5 417 aa16.51■□□□□ 0.23
DDR1-278ENST00000515233 TTC38Q5R3I4 469 aa16.51■□□□□ 0.23
DDR1-278ENST00000515233 SLC8B1Q6J4K2 584 aa16.51■□□□□ 0.23
DDR1-278ENST00000515233 NPAS3Q8IXF0 933 aa16.51■□□□□ 0.23
DDR1-278ENST00000515233 MAML2Q8IZL2 1156 aaPredicted RBP16.51■□□□□ 0.23
DDR1-278ENST00000515233 C3orf58Q8NDZ4 430 aa16.51■□□□□ 0.23
DDR1-278ENST00000515233 DDX27Q96GQ7 796 aaKnown RBP16.51■□□□□ 0.23
DDR1-278ENST00000515233 ACO2Q99798 780 aaKnown RBP16.51■□□□□ 0.23
DDR1-278ENST00000515233 TMEM134Q9H6X4 195 aa16.51■□□□□ 0.23
DDR1-278ENST00000515233 PTPRHQ9HD43 1115 aa16.51■□□□□ 0.23
DDR1-278ENST00000515233 TOPORSQ9NS56 1045 aaPredicted RBP16.51■□□□□ 0.23
DDR1-278ENST00000515233 HCFC1R1Q9NWW0 138 aa16.51■□□□□ 0.23
DDR1-278ENST00000515233 GDE1Q9NZC3 331 aa16.51■□□□□ 0.23
DDR1-278ENST00000515233 LRWD1Q9UFC0 647 aa16.51■□□□□ 0.23
DDR1-278ENST00000515233 LIMCH1Q9UPQ0 1083 aa16.51■□□□□ 0.23
DDR1-278ENST00000515233 KIAA1024Q9UPX6 916 aa16.51■□□□□ 0.23
DDR1-278ENST00000515233 MIA3Q5JRA6 1907 aa16.51■□□□□ 0.23
DDR1-278ENST00000515233 GVINP1Q7Z2Y8 2422 aa16.5■□□□□ 0.23
DDR1-278ENST00000515233 CACNA1IQ9P0X4 2223 aa16.5■□□□□ 0.23
DDR1-278ENST00000515233 ARHGEF37A1IGU5 675 aa16.5■□□□□ 0.23
DDR1-278ENST00000515233 LRRN2O75325 713 aa16.5■□□□□ 0.23
DDR1-278ENST00000515233 ECI2O75521 394 aa16.5■□□□□ 0.23
DDR1-278ENST00000515233 ABLIM3O94929 683 aa16.5■□□□□ 0.23
DDR1-278ENST00000515233 PTPN2P17706 415 aa16.5■□□□□ 0.23
DDR1-278ENST00000515233 TKTP29401 623 aaKnown RBP16.5■□□□□ 0.23
DDR1-278ENST00000515233 MAGEA9P43362 315 aa16.5■□□□□ 0.23
DDR1-278ENST00000515233 BRCC3P46736 316 aa16.5■□□□□ 0.23
DDR1-278ENST00000515233 YARSP54577 528 aaKnown RBP16.5■□□□□ 0.23
DDR1-278ENST00000515233 SOX4Q06945 474 aaPredicted RBP16.5■□□□□ 0.23
DDR1-278ENST00000515233 CEP120Q8N960 986 aa16.5■□□□□ 0.23
DDR1-278ENST00000515233 IGSF22Q8N9C0 903 aa16.5■□□□□ 0.23
DDR1-278ENST00000515233 CCDC94Q9BW85 323 aaPredicted RBP16.5■□□□□ 0.23
DDR1-278ENST00000515233 BCO2Q9BYV7 579 aa16.5■□□□□ 0.23
DDR1-278ENST00000515233 GOLGA2P5Q9HBQ8 144 aa16.5■□□□□ 0.23
DDR1-278ENST00000515233 DDX19AQ9NUU7 478 aaKnown RBP16.5■□□□□ 0.23
DDR1-278ENST00000515233 SLC38A7Q9NVC3 462 aa16.5■□□□□ 0.23
DDR1-278ENST00000515233 FBXO4Q9UKT5 387 aa16.5■□□□□ 0.23
DDR1-278ENST00000515233 WDR87Q6ZQQ6 2873 aa16.5■□□□□ 0.23
DDR1-278ENST00000515233 PHLPP2Q6ZVD8 1323 aa16.49■□□□□ 0.23
DDR1-278ENST00000515233 TBC1D4O60343 1298 aa16.49■□□□□ 0.23
DDR1-278ENST00000515233 RHOP08100 348 aa16.49■□□□□ 0.23
DDR1-278ENST00000515233 ATF2P15336 505 aa16.49■□□□□ 0.23
DDR1-278ENST00000515233 NPTX2P47972 431 aa16.49■□□□□ 0.23
DDR1-278ENST00000515233 MRPL58Q14197 206 aaKnown RBP16.49■□□□□ 0.23
DDR1-278ENST00000515233 RUBCNQ92622 972 aa16.49■□□□□ 0.23
DDR1-278ENST00000515233 NELL2Q99435 816 aa16.49■□□□□ 0.23
DDR1-278ENST00000515233 CDT1Q9H211 546 aa16.49■□□□□ 0.23
DDR1-278ENST00000515233 MRPS23Q9Y3D9 190 aaKnown RBP16.49■□□□□ 0.23
DDR1-278ENST00000515233 MTF2Q9Y483 593 aaPredicted RBP16.49■□□□□ 0.23
DDR1-278ENST00000515233 RBM19Q9Y4C8 960 aaKnown RBP16.49■□□□□ 0.23
DDR1-278ENST00000515233 FAM170BA6NMN3 283 aa16.48■□□□□ 0.23
DDR1-278ENST00000515233 CCDC169A6NNP5 214 aa16.48■□□□□ 0.23
DDR1-278ENST00000515233 MICAL2O94851 1124 aa16.48■□□□□ 0.23
DDR1-278ENST00000515233 KCNE1P15382 129 aa16.48■□□□□ 0.23
DDR1-278ENST00000515233 PROZP22891 400 aa16.48■□□□□ 0.23
DDR1-278ENST00000515233 ELF1P32519 619 aa16.48■□□□□ 0.23
DDR1-278ENST00000515233 PEX3P56589 373 aa16.48■□□□□ 0.23
DDR1-278ENST00000515233 HMGN5P82970 282 aaKnown RBP16.48■□□□□ 0.23
DDR1-278ENST00000515233 ROR1Q01973 937 aa16.48■□□□□ 0.23
DDR1-278ENST00000515233 ZBTB41Q5SVQ8 909 aa16.48■□□□□ 0.23
DDR1-278ENST00000515233 CCDC83Q8IWF9 413 aa16.48■□□□□ 0.23
DDR1-278ENST00000515233 DAW1Q8N136 415 aa16.48■□□□□ 0.23
DDR1-278ENST00000515233 SUMF1Q8NBK3 374 aa16.48■□□□□ 0.23
DDR1-278ENST00000515233 CLDN23Q96B33 292 aa16.48■□□□□ 0.23
DDR1-278ENST00000515233 MCRS1Q96EZ8 462 aa16.48■□□□□ 0.23
DDR1-278ENST00000515233 ZMAT2Q96NC0 199 aaKnown RBP16.48■□□□□ 0.23
DDR1-278ENST00000515233 KXD1Q9BQD3 176 aa16.48■□□□□ 0.23
DDR1-278ENST00000515233 NTPCRQ9BSD7 190 aaKnown RBP16.48■□□□□ 0.23
DDR1-278ENST00000515233 MRPL4Q9BYD3 311 aaKnown RBP16.48■□□□□ 0.23
DDR1-278ENST00000515233 RAB34Q9BZG1 259 aa16.48■□□□□ 0.23
DDR1-278ENST00000515233 C17orf75Q9HAS0 396 aa16.48■□□□□ 0.23
DDR1-278ENST00000515233 LTB4R2Q9NPC1 389 aa16.48■□□□□ 0.23
DDR1-278ENST00000515233 ARHGAP28Q9P2N2 729 aa16.48■□□□□ 0.23
DDR1-278ENST00000515233 NOL7Q9UMY1 257 aaKnown RBP16.48■□□□□ 0.23
DDR1-278ENST00000515233 DNM3Q9UQ16 869 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms