RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 MAN2A1Q16706 1144 aa12.98□□□□□ -0.33
PDLIM5-220ENST00000514830 CLLU1OSQ5K130 101 aa12.98□□□□□ -0.33
PDLIM5-220ENST00000514830 GLB1LQ6UWU2 654 aa12.98□□□□□ -0.33
PDLIM5-220ENST00000514830 C15orf39Q6ZRI6 1047 aa12.98□□□□□ -0.33
PDLIM5-220ENST00000514830 OTOP2Q7RTS6 562 aa12.98□□□□□ -0.33
PDLIM5-220ENST00000514830 RDH13Q8NBN7 331 aa12.98□□□□□ -0.33
PDLIM5-220ENST00000514830 ANKRD20A12PQ8NF67 263 aa12.98□□□□□ -0.33
PDLIM5-220ENST00000514830 ZNF689Q96CS4 500 aaPredicted RBP12.98□□□□□ -0.33
PDLIM5-220ENST00000514830 PPP1R10Q96QC0 940 aaKnown RBP12.98□□□□□ -0.33
PDLIM5-220ENST00000514830 FNBP1Q96RU3 617 aa12.98□□□□□ -0.33
PDLIM5-220ENST00000514830 TUBGCP2Q9BSJ2 902 aa12.98□□□□□ -0.33
PDLIM5-220ENST00000514830 MRPL9Q9BYD2 267 aaKnown RBP12.98□□□□□ -0.33
PDLIM5-220ENST00000514830 TMEM117Q9H0C3 514 aa12.98□□□□□ -0.33
PDLIM5-220ENST00000514830 PDE11AQ9HCR9 933 aa12.98□□□□□ -0.33
PDLIM5-220ENST00000514830 SLC38A7Q9NVC3 462 aa12.98□□□□□ -0.33
PDLIM5-220ENST00000514830 INTS13Q9NVM9 706 aa12.98□□□□□ -0.33
PDLIM5-220ENST00000514830 PARP2Q9UGN5 583 aa12.98□□□□□ -0.33
PDLIM5-220ENST00000514830 LRFN2Q9ULH4 789 aa12.98□□□□□ -0.33
PDLIM5-220ENST00000514830 GBF1Q92538 1859 aa12.97□□□□□ -0.33
PDLIM5-220ENST00000514830 KIAA1671Q9BY89 1806 aa12.97□□□□□ -0.33
PDLIM5-220ENST00000514830 GTPBP10A4D1E9 387 aaKnown RBP12.97□□□□□ -0.33
PDLIM5-220ENST00000514830 LRRIQ3A6PVS8 624 aaPredicted RBP12.97□□□□□ -0.33
PDLIM5-220ENST00000514830 WNT7BP56706 349 aa12.97□□□□□ -0.33
PDLIM5-220ENST00000514830 DEFB103AP81534 67 aa12.97□□□□□ -0.33
PDLIM5-220ENST00000514830 HTRA4P83105 476 aaPredicted RBP12.97□□□□□ -0.33
PDLIM5-220ENST00000514830 GRIK3Q13003 919 aa12.97□□□□□ -0.33
PDLIM5-220ENST00000514830 TMEM132DQ14C87 1099 aa12.97□□□□□ -0.33
PDLIM5-220ENST00000514830 KRT31Q15323 416 aa12.97□□□□□ -0.33
PDLIM5-220ENST00000514830 NAB2Q15742 525 aa12.97□□□□□ -0.33
PDLIM5-220ENST00000514830 MIIPQ5JXC2 388 aa12.97□□□□□ -0.33
PDLIM5-220ENST00000514830 EFCAB13Q8IY85 973 aa12.97□□□□□ -0.33
PDLIM5-220ENST00000514830 CACTINQ8WUQ7 758 aaKnown RBP12.97□□□□□ -0.33
PDLIM5-220ENST00000514830 LPPQ93052 612 aa12.97□□□□□ -0.33
PDLIM5-220ENST00000514830 CASD1Q96PB1 797 aa12.97□□□□□ -0.33
PDLIM5-220ENST00000514830 GAD1Q99259 594 aa12.97□□□□□ -0.33
PDLIM5-220ENST00000514830 UBQLN1Q9UMX0 589 aaKnown RBP12.97□□□□□ -0.33
PDLIM5-220ENST00000514830 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.97□□□□□ -0.33
PDLIM5-220ENST00000514830 A0A0C4DFX4 3053 aa12.97□□□□□ -0.33
PDLIM5-220ENST00000514830 PTPRJQ12913 1337 aa12.96□□□□□ -0.33
PDLIM5-220ENST00000514830 FSD2A1L4K1 749 aa12.96□□□□□ -0.33
PDLIM5-220ENST00000514830 CARNS1A5YM72 827 aa12.96□□□□□ -0.33
PDLIM5-220ENST00000514830 N4BP1O75113 896 aaKnown RBP12.96□□□□□ -0.33
PDLIM5-220ENST00000514830 GJB5O95377 273 aa12.96□□□□□ -0.33
PDLIM5-220ENST00000514830 THP07101 528 aa12.96□□□□□ -0.33
PDLIM5-220ENST00000514830 ATP1A3P13637 1013 aa12.96□□□□□ -0.33
PDLIM5-220ENST00000514830 CDK11BP21127 795 aaKnown RBP12.96□□□□□ -0.33
PDLIM5-220ENST00000514830 MLH1P40692 756 aa12.96□□□□□ -0.33
PDLIM5-220ENST00000514830 MTIF2P46199 727 aaKnown RBP12.96□□□□□ -0.33
PDLIM5-220ENST00000514830 DLG4P78352 724 aa12.96□□□□□ -0.33
PDLIM5-220ENST00000514830 DSC1Q08554 894 aa12.96□□□□□ -0.33
PDLIM5-220ENST00000514830 DUOXA2Q1HG44 320 aa12.96□□□□□ -0.33
PDLIM5-220ENST00000514830 ZACNQ401N2 412 aa12.96□□□□□ -0.33
PDLIM5-220ENST00000514830 NOMO2Q5JPE7 1267 aa12.96□□□□□ -0.33
PDLIM5-220ENST00000514830 JADE1Q6IE81 842 aa12.96□□□□□ -0.33
PDLIM5-220ENST00000514830 SARM1Q6SZW1 724 aa12.96□□□□□ -0.33
PDLIM5-220ENST00000514830 CMTR2Q8IYT2 770 aaKnown RBP12.96□□□□□ -0.33
PDLIM5-220ENST00000514830 URGCPQ8TCY9 931 aa12.96□□□□□ -0.33
PDLIM5-220ENST00000514830 ZNF516Q92618 1163 aa12.96□□□□□ -0.33
PDLIM5-220ENST00000514830 CCDC127Q96BQ5 260 aa12.96□□□□□ -0.33
PDLIM5-220ENST00000514830 ZFP42Q96MM3 310 aa12.96□□□□□ -0.33
PDLIM5-220ENST00000514830 ZMAT2Q96NC0 199 aaKnown RBP12.96□□□□□ -0.33
PDLIM5-220ENST00000514830 RPS6KC1Q96S38 1066 aa12.96□□□□□ -0.33
PDLIM5-220ENST00000514830 APOL6Q9BWW8 343 aa12.96□□□□□ -0.33
PDLIM5-220ENST00000514830 TMEM8AQ9HCN3 771 aa12.96□□□□□ -0.33
PDLIM5-220ENST00000514830 MTMR10Q9NXD2 777 aa12.96□□□□□ -0.33
PDLIM5-220ENST00000514830 CXXC1Q9P0U4 656 aaPredicted RBP12.96□□□□□ -0.33
PDLIM5-220ENST00000514830 COQ4Q9Y3A0 265 aa12.96□□□□□ -0.33
PDLIM5-220ENST00000514830 SLC4A7Q9Y6M7 1214 aa12.96□□□□□ -0.33
PDLIM5-220ENST00000514830 NLRC5Q86WI3 1866 aa12.95□□□□□ -0.34
PDLIM5-220ENST00000514830 SCN1AP35498 2009 aa12.95□□□□□ -0.34
PDLIM5-220ENST00000514830 A0A1B0GTH6 734 aa12.95□□□□□ -0.34
PDLIM5-220ENST00000514830 LGALS16A8MUM7 142 aa12.95□□□□□ -0.34
PDLIM5-220ENST00000514830 RBAK-RBAKDNI3L0D1 243 aa12.95□□□□□ -0.34
PDLIM5-220ENST00000514830 AFPP02771 609 aaKnown RBP12.95□□□□□ -0.34
PDLIM5-220ENST00000514830 C4BPAP04003 597 aaKnown RBP12.95□□□□□ -0.34
PDLIM5-220ENST00000514830 TPM2P07951 284 aa12.95□□□□□ -0.34
PDLIM5-220ENST00000514830 NFICP08651 508 aa12.95□□□□□ -0.34
PDLIM5-220ENST00000514830 DLATP10515 647 aaKnown RBP12.95□□□□□ -0.34
PDLIM5-220ENST00000514830 FGFR1P11362 822 aa12.95□□□□□ -0.34
PDLIM5-220ENST00000514830 TNNI1P19237 187 aa12.95□□□□□ -0.34
PDLIM5-220ENST00000514830 PAX3P23760 479 aa12.95□□□□□ -0.34
PDLIM5-220ENST00000514830 LRPAP1P30533 357 aa12.95□□□□□ -0.34
PDLIM5-220ENST00000514830 FMO5P49326 533 aa12.95□□□□□ -0.34
PDLIM5-220ENST00000514830 COPB1P53618 953 aaKnown RBP12.95□□□□□ -0.34
PDLIM5-220ENST00000514830 PPP3CAQ08209 521 aa12.95□□□□□ -0.34
PDLIM5-220ENST00000514830 KCNH2Q12809 1159 aa12.95□□□□□ -0.34
PDLIM5-220ENST00000514830 VWA3BQ502W6 1294 aa12.95□□□□□ -0.34
PDLIM5-220ENST00000514830 KRT39Q6A163 491 aa12.95□□□□□ -0.34
PDLIM5-220ENST00000514830 SMYD5Q6GMV2 418 aa12.95□□□□□ -0.34
PDLIM5-220ENST00000514830 FAM109BQ6ICB4 259 aaPredicted RBP12.95□□□□□ -0.34
PDLIM5-220ENST00000514830 ABI1Q8IZP0 508 aa12.95□□□□□ -0.34
PDLIM5-220ENST00000514830 RNF169Q8NCN4 708 aa12.95□□□□□ -0.34
PDLIM5-220ENST00000514830 RNF214Q8ND24 703 aa12.95□□□□□ -0.34
PDLIM5-220ENST00000514830 CXorf38Q8TB03 319 aa12.95□□□□□ -0.34
PDLIM5-220ENST00000514830 SP7Q8TDD2 431 aaPredicted RBP12.95□□□□□ -0.34
PDLIM5-220ENST00000514830 HELQQ8TDG4 1101 aa12.95□□□□□ -0.34
PDLIM5-220ENST00000514830 KIF12Q96FN5 646 aa12.95□□□□□ -0.34
PDLIM5-220ENST00000514830 ANKRD36BP1Q96IX9 119 aa12.95□□□□□ -0.34
PDLIM5-220ENST00000514830 UROC1Q96N76 676 aa12.95□□□□□ -0.34
PDLIM5-220ENST00000514830 CXCL16Q9H2A7 254 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms