RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 SLC1A4P43007 532 aa7.95□□□□□ -1.14
PDLIM5-219ENST00000514743 SNAP25P60880 206 aa7.95□□□□□ -1.14
PDLIM5-219ENST00000514743 PDCLQ13371 301 aa7.95□□□□□ -1.14
PDLIM5-219ENST00000514743 HLTFQ14527 1009 aaKnown RBP eCLIP7.95□□□□□ -1.14
PDLIM5-219ENST00000514743 MAN2A1Q16706 1144 aa7.95□□□□□ -1.14
PDLIM5-219ENST00000514743 ANKRD20A2Q5SQ80 823 aa7.95□□□□□ -1.14
PDLIM5-219ENST00000514743 ANKRD20A1Q5TYW2 823 aa7.95□□□□□ -1.14
PDLIM5-219ENST00000514743 TTC39BQ5VTQ0 682 aaPredicted RBP7.95□□□□□ -1.14
PDLIM5-219ENST00000514743 ANKRD20A3Q5VUR7 823 aa7.95□□□□□ -1.14
PDLIM5-219ENST00000514743 POTEBQ6S5H4 581 aa7.95□□□□□ -1.14
PDLIM5-219ENST00000514743 PNMA8AQ86V59 439 aaPredicted RBP7.95□□□□□ -1.14
PDLIM5-219ENST00000514743 C2CD5Q86YS7 1000 aa7.95□□□□□ -1.14
PDLIM5-219ENST00000514743 BRSK1Q8TDC3 778 aa7.95□□□□□ -1.14
PDLIM5-219ENST00000514743 BAP1Q92560 729 aa7.95□□□□□ -1.14
PDLIM5-219ENST00000514743 L3MBTL3Q96JM7 780 aaPredicted RBP7.95□□□□□ -1.14
PDLIM5-219ENST00000514743 VIPAS39Q9H9C1 493 aa7.95□□□□□ -1.14
PDLIM5-219ENST00000514743 DLGAP2Q9P1A6 1054 aa7.95□□□□□ -1.14
PDLIM5-219ENST00000514743 DSEQ9UL01 958 aa7.95□□□□□ -1.14
PDLIM5-219ENST00000514743 DUSP10Q9Y6W6 482 aa7.95□□□□□ -1.14
PDLIM5-219ENST00000514743 IVNS1ABPQ9Y6Y0 642 aa7.95□□□□□ -1.14
PDLIM5-219ENST00000514743 MYH11P35749 1972 aa7.95□□□□□ -1.14
PDLIM5-219ENST00000514743 NPHP3-ACAD11A0A0J9YXS1 232 aa7.95□□□□□ -1.14
PDLIM5-219ENST00000514743 YDJCA8MPS7 323 aa7.95□□□□□ -1.14
PDLIM5-219ENST00000514743 CETN3O15182 167 aa7.95□□□□□ -1.14
PDLIM5-219ENST00000514743 ZBED4O75132 1171 aa7.95□□□□□ -1.14
PDLIM5-219ENST00000514743 IDEP14735 1019 aa7.95□□□□□ -1.14
PDLIM5-219ENST00000514743 PORP16435 677 aaPredicted RBP7.95□□□□□ -1.14
PDLIM5-219ENST00000514743 STAT3P40763 770 aa7.95□□□□□ -1.14
PDLIM5-219ENST00000514743 KCNMA1Q12791 1236 aa7.95□□□□□ -1.14
PDLIM5-219ENST00000514743 IKQ13123 557 aaPredicted RBP7.95□□□□□ -1.14
PDLIM5-219ENST00000514743 C15orf59Q2T9L4 293 aaPredicted RBP7.95□□□□□ -1.14
PDLIM5-219ENST00000514743 ARSHQ5FYA8 562 aa7.95□□□□□ -1.14
PDLIM5-219ENST00000514743 PPP2R2DQ66LE6 453 aa7.95□□□□□ -1.14
PDLIM5-219ENST00000514743 STYK1Q6J9G0 422 aa7.95□□□□□ -1.14
PDLIM5-219ENST00000514743 MOXD1Q6UVY6 613 aa7.95□□□□□ -1.14
PDLIM5-219ENST00000514743 KRT77Q7Z794 578 aa7.95□□□□□ -1.14
PDLIM5-219ENST00000514743 ZC3H3Q8IXZ2 948 aaKnown RBP7.95□□□□□ -1.14
PDLIM5-219ENST00000514743 FAM133AQ8N9E0 248 aa7.95□□□□□ -1.14
PDLIM5-219ENST00000514743 AGAP11Q8TF27 550 aa7.95□□□□□ -1.14
PDLIM5-219ENST00000514743 ZNF473Q8WTR7 871 aaKnown RBP7.95□□□□□ -1.14
PDLIM5-219ENST00000514743 NLRP7Q8WX94 980 aa7.95□□□□□ -1.14
PDLIM5-219ENST00000514743 GFM2Q969S9 779 aaKnown RBP7.95□□□□□ -1.14
PDLIM5-219ENST00000514743 ERP44Q9BS26 406 aa7.95□□□□□ -1.14
PDLIM5-219ENST00000514743 B3GNT4Q9C0J1 378 aa7.95□□□□□ -1.14
PDLIM5-219ENST00000514743 KDM3AQ9Y4C1 1321 aa7.95□□□□□ -1.14
PDLIM5-219ENST00000514743 A0A1W2PRG0 241 aa7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 A6NNZ2 444 aa7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 F5H6K3 240 aa7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 CLASP2O75122 1294 aaKnown RBP7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 BTF3P20290 206 aaKnown RBP7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 ATP5DP30049 168 aa7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 HOXA7P31268 230 aaPredicted RBP7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 SLC12A3P55017 1021 aa7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 VSNL1P62760 191 aa7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 DR1Q01658 176 aa7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 KLRC3Q07444 240 aa7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 RALGDSQ12967 914 aa7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 TUBB8Q3ZCM7 444 aa7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 ANKDD1AQ495B1 522 aa7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 PAPD7Q5XG87 772 aaKnown RBP7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 ANO7Q6IWH7 933 aa7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 TMEM179Q6ZVK1 233 aa7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 IFT81Q8WYA0 676 aa7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 GMCL1Q96IK5 515 aa7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 PCMTD1Q96MG8 357 aaPredicted RBP7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 CATSPER2Q96P56 530 aa7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 KCTD10Q9H3F6 313 aa7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 ATPIF1Q9UII2 106 aa7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 KIAA1024Q9UPX6 916 aa7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 FAM32AQ9Y421 112 aaKnown RBP7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 CCDC169A6NNP5 214 aa7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 FAM86B1E9PN63 330 aa7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 NDUFB10O96000 172 aa7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 APBA3O96018 575 aa7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 FAM86B2P0C5J1 330 aa7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 CHRNA5P30532 468 aa7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 TMED10P49755 219 aaKnown RBP7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 TUBA4AP68366 448 aa7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 MRPS25P82663 173 aaKnown RBP7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 CYP27A1Q02318 531 aa7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 GBE1Q04446 702 aa7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 KIF5AQ12840 1032 aa7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 AP3B2Q13367 1082 aa7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 E2F2Q14209 437 aa7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 STK11Q15831 433 aa7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 AOC3Q16853 763 aa7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 ANKRD20A8PQ5CZ79 823 aa7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 KRT26Q7Z3Y9 468 aa7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 VPS36Q86VN1 386 aa7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 FAM9CQ8IZT9 166 aa7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 MTMR12Q9C0I1 747 aa7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 NT5C3AQ9H0P0 336 aa7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 GBA3Q9H227 469 aa7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 TDRD3Q9H7E2 651 aaKnown RBP7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 PANK4Q9NVE7 773 aa7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 TTC7AQ9ULT0 858 aaPredicted RBP7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 FADS3Q9Y5Q0 445 aa7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 NOX1Q9Y5S8 564 aa7.94□□□□□ -1.14
PDLIM5-219ENST00000514743 PARP14Q460N5 1801 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms