RNA–Protein interactions for RNA: ENST00000514305.5

USP53-208, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-208ENST00000514305 BARX2Q9UMQ3 279 aaPredicted RBP21.98■■□□□ 1.11
USP53-208ENST00000514305 ARIH1Q9Y4X5 557 aaPredicted RBP21.98■■□□□ 1.11
USP53-208ENST00000514305 PSMA7O14818 248 aa21.97■■□□□ 1.11
USP53-208ENST00000514305 B4GALT5O43286 388 aa21.97■■□□□ 1.11
USP53-208ENST00000514305 ZNF623O75123 536 aa21.97■■□□□ 1.11
USP53-208ENST00000514305 GLP2RO95838 553 aa21.97■■□□□ 1.11
USP53-208ENST00000514305 LDHAP00338 332 aaKnown RBP21.97■■□□□ 1.11
USP53-208ENST00000514305 MCF2P10911 925 aa21.97■■□□□ 1.11
USP53-208ENST00000514305 ERVFC1P60507 584 aa21.97■■□□□ 1.11
USP53-208ENST00000514305 PLCB3Q01970 1234 aa21.97■■□□□ 1.11
USP53-208ENST00000514305 MORC3Q14149 939 aa21.97■■□□□ 1.11
USP53-208ENST00000514305 ZNF568Q3ZCX4 644 aa21.97■■□□□ 1.11
USP53-208ENST00000514305 LCE2DQ5TA82 110 aaPredicted RBP21.97■■□□□ 1.11
USP53-208ENST00000514305 PLPP4Q5VZY2 271 aa21.97■■□□□ 1.11
USP53-208ENST00000514305 LRRC55Q6ZSA7 311 aa21.97■■□□□ 1.11
USP53-208ENST00000514305 MLKLQ8NB16 471 aa21.97■■□□□ 1.11
USP53-208ENST00000514305 KIAA0895Q8NCT3 520 aa21.97■■□□□ 1.11
USP53-208ENST00000514305 SCFD1Q8WVM8 642 aa21.97■■□□□ 1.11
USP53-208ENST00000514305 ERCC4Q92889 916 aaPredicted RBP21.97■■□□□ 1.11
USP53-208ENST00000514305 TSG101Q99816 390 aa21.97■■□□□ 1.11
USP53-208ENST00000514305 MRPL9Q9BYD2 267 aaKnown RBP21.97■■□□□ 1.11
USP53-208ENST00000514305 FAM105AQ9NUU6 356 aa21.97■■□□□ 1.11
USP53-208ENST00000514305 RNF19AQ9NV58 838 aa21.97■■□□□ 1.11
USP53-208ENST00000514305 PER2O15055 1255 aa21.96■■□□□ 1.11
USP53-208ENST00000514305 GARTP22102 1010 aa21.96■■□□□ 1.11
USP53-208ENST00000514305 CASP5P51878 434 aa21.96■■□□□ 1.11
USP53-208ENST00000514305 NOLC1Q14978 699 aaKnown RBP eCLIP21.96■■□□□ 1.11
USP53-208ENST00000514305 DUSP6Q16828 381 aa21.96■■□□□ 1.11
USP53-208ENST00000514305 CLLU1OSQ5K130 101 aa21.96■■□□□ 1.11
USP53-208ENST00000514305 NELFCDQ8IXH7 590 aa21.96■■□□□ 1.11
USP53-208ENST00000514305 HELQQ8TDG4 1101 aa21.96■■□□□ 1.11
USP53-208ENST00000514305 POMGNT1Q8WZA1 660 aa21.96■■□□□ 1.11
USP53-208ENST00000514305 DHTKD1Q96HY7 919 aaPredicted RBP21.96■■□□□ 1.11
USP53-208ENST00000514305 TCF25Q9BQ70 676 aa21.96■■□□□ 1.11
USP53-208ENST00000514305 PDZD7Q9H5P4 517 aa21.96■■□□□ 1.11
USP53-208ENST00000514305 NGRNQ9NPE2 291 aaKnown RBP21.96■■□□□ 1.11
USP53-208ENST00000514305 SPG21Q9NZD8 308 aa21.96■■□□□ 1.11
USP53-208ENST00000514305 BIN1O00499 593 aa21.95■■□□□ 1.1
USP53-208ENST00000514305 PDXKO00764 312 aa21.95■■□□□ 1.1
USP53-208ENST00000514305 FSCN2O14926 492 aa21.95■■□□□ 1.1
USP53-208ENST00000514305 MCL1Q07820 350 aa21.95■■□□□ 1.1
USP53-208ENST00000514305 CT47A1Q5JQC4 288 aaPredicted RBP21.95■■□□□ 1.1
USP53-208ENST00000514305 ARMCX5Q6P1M9 558 aa21.95■■□□□ 1.1
USP53-208ENST00000514305 RBM43Q6ZSC3 357 aaKnown RBP21.95■■□□□ 1.1
USP53-208ENST00000514305 ZNF598Q86UK7 904 aaKnown RBP21.95■■□□□ 1.1
USP53-208ENST00000514305 CCDC94Q9BW85 323 aaPredicted RBP21.95■■□□□ 1.1
USP53-208ENST00000514305 KIAA1586Q9HCI6 787 aa21.95■■□□□ 1.1
USP53-208ENST00000514305 ANKFY1Q9P2R3 1169 aa21.95■■□□□ 1.1
USP53-208ENST00000514305 GDAQ9Y2T3 454 aa21.95■■□□□ 1.1
USP53-208ENST00000514305 PCDHB2Q9Y5E7 798 aa21.95■■□□□ 1.1
USP53-208ENST00000514305 BICDL2A1A5D9 508 aa21.94■■□□□ 1.1
USP53-208ENST00000514305 NPTXRO95502 500 aa21.94■■□□□ 1.1
USP53-208ENST00000514305 ITGA4P13612 1032 aa21.94■■□□□ 1.1
USP53-208ENST00000514305 PROZP22891 400 aa21.94■■□□□ 1.1
USP53-208ENST00000514305 RPL13P26373 211 aaKnown RBP21.94■■□□□ 1.1
USP53-208ENST00000514305 PBX3P40426 434 aa21.94■■□□□ 1.1
USP53-208ENST00000514305 YARSP54577 528 aaKnown RBP21.94■■□□□ 1.1
USP53-208ENST00000514305 NLRP12P59046 1061 aa21.94■■□□□ 1.1
USP53-208ENST00000514305 MYBPC2Q14324 1141 aa21.94■■□□□ 1.1
USP53-208ENST00000514305 ISM2Q6H9L7 571 aa21.94■■□□□ 1.1
USP53-208ENST00000514305 TMC7Q7Z402 723 aa21.94■■□□□ 1.1
USP53-208ENST00000514305 MSTO1Q9BUK6 570 aa21.94■■□□□ 1.1
USP53-208ENST00000514305 PTPRHQ9HD43 1115 aa21.94■■□□□ 1.1
USP53-208ENST00000514305 TOPORSQ9NS56 1045 aaPredicted RBP21.94■■□□□ 1.1
USP53-208ENST00000514305 USP15Q9Y4E8 981 aaPredicted RBP21.94■■□□□ 1.1
USP53-208ENST00000514305 STYXL1Q9Y6J8 313 aa21.94■■□□□ 1.1
USP53-208ENST00000514305 RIOK3O14730 519 aaKnown RBP21.93■■□□□ 1.1
USP53-208ENST00000514305 OGTO15294 1046 aa21.93■■□□□ 1.1
USP53-208ENST00000514305 ATF7P17544 494 aaPredicted RBP21.93■■□□□ 1.1
USP53-208ENST00000514305 ALDH7A1P49419 539 aaKnown RBP21.93■■□□□ 1.1
USP53-208ENST00000514305 POU5F1Q01860 360 aaKnown RBP21.93■■□□□ 1.1
USP53-208ENST00000514305 BMS1Q14692 1282 aaKnown RBP21.93■■□□□ 1.1
USP53-208ENST00000514305 MRPL10Q7Z7H8 261 aaKnown RBP21.93■■□□□ 1.1
USP53-208ENST00000514305 FGFBP2Q9BYJ0 223 aa21.93■■□□□ 1.1
USP53-208ENST00000514305 ANO10Q9NW15 660 aa21.93■■□□□ 1.1
USP53-208ENST00000514305 TMEM63CQ9P1W3 806 aa21.93■■□□□ 1.1
USP53-208ENST00000514305 GIT1Q9Y2X7 761 aa21.93■■□□□ 1.1
USP53-208ENST00000514305 A0A0B4J269 797 aa21.92■■□□□ 1.1
USP53-208ENST00000514305 CARNS1A5YM72 827 aa21.92■■□□□ 1.1
USP53-208ENST00000514305 PRCPP42785 496 aa21.92■■□□□ 1.1
USP53-208ENST00000514305 KCNA1Q09470 495 aa21.92■■□□□ 1.1
USP53-208ENST00000514305 ZBTB33Q86T24 672 aa21.92■■□□□ 1.1
USP53-208ENST00000514305 RNF135Q8IUD6 432 aa21.92■■□□□ 1.1
USP53-208ENST00000514305 ADSSL1Q8N142 457 aa21.92■■□□□ 1.1
USP53-208ENST00000514305 GLIS3Q8NEA6 775 aa21.92■■□□□ 1.1
USP53-208ENST00000514305 CDT1Q9H211 546 aa21.92■■□□□ 1.1
USP53-208ENST00000514305 MUTYHQ9UIF7 546 aa21.92■■□□□ 1.1
USP53-208ENST00000514305 AGO2Q9UKV8 859 aaKnown RBP21.92■■□□□ 1.1
USP53-208ENST00000514305 MAPK8IP1Q9UQF2 711 aa21.92■■□□□ 1.1
USP53-208ENST00000514305 IPPQ9Y573 584 aa21.92■■□□□ 1.1
USP53-208ENST00000514305 FGFR1OPO95684 399 aaKnown RBP21.91■■□□□ 1.1
USP53-208ENST00000514305 HARSP12081 509 aaKnown RBP21.91■■□□□ 1.1
USP53-208ENST00000514305 CCNE1P24864 410 aa21.91■■□□□ 1.1
USP53-208ENST00000514305 GRM5P41594 1212 aa21.91■■□□□ 1.1
USP53-208ENST00000514305 BCAR1P56945 870 aa21.91■■□□□ 1.1
USP53-208ENST00000514305 LRRC63Q05C16 580 aa21.91■■□□□ 1.1
USP53-208ENST00000514305 SMC1AQ14683 1233 aaKnown RBP21.91■■□□□ 1.1
USP53-208ENST00000514305 UBXN11Q5T124 520 aa21.91■■□□□ 1.1
USP53-208ENST00000514305 EEF1DP3Q658K8 133 aa21.91■■□□□ 1.1
USP53-208ENST00000514305 GLB1LQ6UWU2 654 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms