RNA–Protein interactions for RNA: ENST00000512687.5

CDK7-208, Transcript of cyclin dependent kinase 7, humanhuman

TSL 1 (best)

Gene CDK7, Length 905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-208ENST00000512687 TMEM189-UBE2V1I3L0A0 370 aa13.17□□□□□ -0.3
CDK7-208ENST00000512687 I3L4J1 428 aa13.17□□□□□ -0.3
CDK7-208ENST00000512687 K7ELQ4 463 aaPredicted RBP13.17□□□□□ -0.3
CDK7-208ENST00000512687 M0R296 226 aa13.17□□□□□ -0.3
CDK7-208ENST00000512687 ADAM12O43184 909 aa13.17□□□□□ -0.3
CDK7-208ENST00000512687 TGM5O43548 720 aa13.17□□□□□ -0.3
CDK7-208ENST00000512687 ASGR2P07307 311 aa13.17□□□□□ -0.3
CDK7-208ENST00000512687 MCF2P10911 925 aa13.17□□□□□ -0.3
CDK7-208ENST00000512687 PDCP20941 246 aa13.17□□□□□ -0.3
CDK7-208ENST00000512687 MARCKSP29966 332 aaPredicted RBP13.17□□□□□ -0.3
CDK7-208ENST00000512687 UBA7P41226 1012 aa13.17□□□□□ -0.3
CDK7-208ENST00000512687 NOLC1Q14978 699 aaKnown RBP eCLIP13.17□□□□□ -0.3
CDK7-208ENST00000512687 UPP1Q16831 310 aa13.17□□□□□ -0.3
CDK7-208ENST00000512687 ATAT1Q5SQI0 421 aa13.17□□□□□ -0.3
CDK7-208ENST00000512687 LILRA6Q6PI73 481 aa13.17□□□□□ -0.3
CDK7-208ENST00000512687 TRIM67Q6ZTA4 783 aa13.17□□□□□ -0.3
CDK7-208ENST00000512687 CEP57Q86XR8 500 aa13.17□□□□□ -0.3
CDK7-208ENST00000512687 GPR65Q8IYL9 337 aa13.17□□□□□ -0.3
CDK7-208ENST00000512687 TDRD5Q8NAT2 981 aaKnown RBP13.17□□□□□ -0.3
CDK7-208ENST00000512687 CMASQ8NFW8 434 aaPredicted RBP13.17□□□□□ -0.3
CDK7-208ENST00000512687 LNX1Q8TBB1 728 aaPredicted RBP13.17□□□□□ -0.3
CDK7-208ENST00000512687 PIK3R5Q8WYR1 880 aa13.17□□□□□ -0.3
CDK7-208ENST00000512687 ZNF707Q96C28 371 aaPredicted RBP13.17□□□□□ -0.3
CDK7-208ENST00000512687 ASIC4Q96FT7 647 aa13.17□□□□□ -0.3
CDK7-208ENST00000512687 CALML4Q96GE6 196 aa13.17□□□□□ -0.3
CDK7-208ENST00000512687 INTS4Q96HW7 963 aaKnown RBP13.17□□□□□ -0.3
CDK7-208ENST00000512687 EPSTI1Q96J88 318 aa13.17□□□□□ -0.3
CDK7-208ENST00000512687 CLIC6Q96NY7 704 aa13.17□□□□□ -0.3
CDK7-208ENST00000512687 FIZ1Q96SL8 496 aa13.17□□□□□ -0.3
CDK7-208ENST00000512687 CLSTN3Q9BQT9 956 aa13.17□□□□□ -0.3
CDK7-208ENST00000512687 TTPALQ9BTX7 342 aa13.17□□□□□ -0.3
CDK7-208ENST00000512687 CCDC94Q9BW85 323 aaPredicted RBP13.17□□□□□ -0.3
CDK7-208ENST00000512687 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.17□□□□□ -0.3
CDK7-208ENST00000512687 ANKFY1Q9P2R3 1169 aa13.17□□□□□ -0.3
CDK7-208ENST00000512687 FBXO2Q9UK22 296 aaPredicted RBP13.17□□□□□ -0.3
CDK7-208ENST00000512687 ODF2LQ9ULJ1 636 aa13.17□□□□□ -0.3
CDK7-208ENST00000512687 ZDBF2Q9HCK1 2354 aa13.17□□□□□ -0.3
CDK7-208ENST00000512687 CCDC195A0A1B0GUA6 201 aa13.16□□□□□ -0.3
CDK7-208ENST00000512687 N4BP1O75113 896 aaKnown RBP13.16□□□□□ -0.3
CDK7-208ENST00000512687 PAPLNO95428 1278 aa13.16□□□□□ -0.3
CDK7-208ENST00000512687 BRCC3P46736 316 aa13.16□□□□□ -0.3
CDK7-208ENST00000512687 ZNF131P52739 623 aa13.16□□□□□ -0.3
CDK7-208ENST00000512687 STRN3Q13033 797 aa13.16□□□□□ -0.3
CDK7-208ENST00000512687 PSMD5Q16401 504 aa13.16□□□□□ -0.3
CDK7-208ENST00000512687 C15orf39Q6ZRI6 1047 aa13.16□□□□□ -0.3
CDK7-208ENST00000512687 HAUS6Q7Z4H7 955 aa13.16□□□□□ -0.3
CDK7-208ENST00000512687 APBB1IPQ7Z5R6 666 aaPredicted RBP13.16□□□□□ -0.3
CDK7-208ENST00000512687 KREMEN2Q8NCW0 462 aa13.16□□□□□ -0.3
CDK7-208ENST00000512687 C18orf25Q96B23 403 aaPredicted RBP13.16□□□□□ -0.3
CDK7-208ENST00000512687 CCSER1Q9C0I3 900 aa13.16□□□□□ -0.3
CDK7-208ENST00000512687 CNTN3Q9P232 1028 aa13.16□□□□□ -0.3
CDK7-208ENST00000512687 TOM1L1O75674 476 aa13.15□□□□□ -0.3
CDK7-208ENST00000512687 B3GAT3O94766 335 aa13.15□□□□□ -0.3
CDK7-208ENST00000512687 KCNE1P15382 129 aa13.15□□□□□ -0.3
CDK7-208ENST00000512687 FGFR3P22607 806 aa13.15□□□□□ -0.3
CDK7-208ENST00000512687 TKTP29401 623 aaKnown RBP13.15□□□□□ -0.3
CDK7-208ENST00000512687 PLA2G5P39877 138 aa13.15□□□□□ -0.3
CDK7-208ENST00000512687 TNFSF9P41273 254 aa13.15□□□□□ -0.3
CDK7-208ENST00000512687 SMTNP53814 917 aa13.15□□□□□ -0.3
CDK7-208ENST00000512687 YARSP54577 528 aaKnown RBP13.15□□□□□ -0.3
CDK7-208ENST00000512687 CEBPZQ03701 1054 aaKnown RBP13.15□□□□□ -0.3
CDK7-208ENST00000512687 MCL1Q07820 350 aa13.15□□□□□ -0.3
CDK7-208ENST00000512687 SIGLEC14Q08ET2 396 aa13.15□□□□□ -0.3
CDK7-208ENST00000512687 SLC10A6Q3KNW5 377 aa13.15□□□□□ -0.3
CDK7-208ENST00000512687 ZBTB41Q5SVQ8 909 aa13.15□□□□□ -0.3
CDK7-208ENST00000512687 SLC39A4Q6P5W5 647 aa13.15□□□□□ -0.3
CDK7-208ENST00000512687 RSPO2Q6UXX9 243 aaPredicted RBP13.15□□□□□ -0.3
CDK7-208ENST00000512687 ZPBP2Q6X784 338 aa13.15□□□□□ -0.3
CDK7-208ENST00000512687 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.15□□□□□ -0.3
CDK7-208ENST00000512687 CCDC149Q6ZUS6 474 aa13.15□□□□□ -0.3
CDK7-208ENST00000512687 ZDHHC14Q8IZN3 488 aa13.15□□□□□ -0.3
CDK7-208ENST00000512687 LARP4BQ92615 738 aaKnown RBP13.15□□□□□ -0.3
CDK7-208ENST00000512687 KCNN1Q92952 543 aa13.15□□□□□ -0.3
CDK7-208ENST00000512687 DDX27Q96GQ7 796 aaKnown RBP13.15□□□□□ -0.3
CDK7-208ENST00000512687 UROC1Q96N76 676 aa13.15□□□□□ -0.3
CDK7-208ENST00000512687 ACAP3Q96P50 834 aa13.15□□□□□ -0.3
CDK7-208ENST00000512687 USP28Q96RU2 1077 aa13.15□□□□□ -0.3
CDK7-208ENST00000512687 TCHPQ9BT92 498 aa13.15□□□□□ -0.3
CDK7-208ENST00000512687 TOPORSQ9NS56 1045 aaPredicted RBP13.15□□□□□ -0.3
CDK7-208ENST00000512687 LARSQ9P2J5 1176 aaKnown RBP13.15□□□□□ -0.3
CDK7-208ENST00000512687 LIMD1Q9UGP4 676 aa13.15□□□□□ -0.3
CDK7-208ENST00000512687 FBXW11Q9UKB1 542 aa13.15□□□□□ -0.3
CDK7-208ENST00000512687 USTQ9Y2C2 406 aa13.15□□□□□ -0.3
CDK7-208ENST00000512687 SRPRBQ9Y5M8 271 aaKnown RBP13.15□□□□□ -0.3
CDK7-208ENST00000512687 CLUHO75153 1309 aa13.14□□□□□ -0.31
CDK7-208ENST00000512687 A0A087X0B3 334 aa13.14□□□□□ -0.31
CDK7-208ENST00000512687 K7ENM7 598 aa13.14□□□□□ -0.31
CDK7-208ENST00000512687 PODXLO00592 558 aa13.14□□□□□ -0.31
CDK7-208ENST00000512687 FAM189A1O60320 539 aa13.14□□□□□ -0.31
CDK7-208ENST00000512687 FAM13AO94988 1023 aa13.14□□□□□ -0.31
CDK7-208ENST00000512687 PDGFBP01127 241 aaPredicted RBP13.14□□□□□ -0.31
CDK7-208ENST00000512687 CXCL8P10145 99 aa13.14□□□□□ -0.31
CDK7-208ENST00000512687 NMT1P30419 496 aaKnown RBP13.14□□□□□ -0.31
CDK7-208ENST00000512687 CREMQ03060 361 aa13.14□□□□□ -0.31
CDK7-208ENST00000512687 ELAVL2Q12926 359 aaKnown RBP13.14□□□□□ -0.31
CDK7-208ENST00000512687 DCLRE1AQ6PJP8 1040 aa13.14□□□□□ -0.31
CDK7-208ENST00000512687 BMP8AQ7Z5Y6 402 aa13.14□□□□□ -0.31
CDK7-208ENST00000512687 MYCT1Q8N699 235 aa13.14□□□□□ -0.31
CDK7-208ENST00000512687 RASSF8Q8NHQ8 419 aa13.14□□□□□ -0.31
CDK7-208ENST00000512687 HDAC7Q8WUI4 952 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms