RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 KCNG4Q8TDN1 519 aa13.81□□□□□ -0.2
VEGFA-216ENST00000512683 BSNDQ8WZ55 320 aa13.81□□□□□ -0.2
VEGFA-216ENST00000512683 RABGGTAQ92696 567 aa13.81□□□□□ -0.2
VEGFA-216ENST00000512683 NTPCRQ9BSD7 190 aaKnown RBP13.81□□□□□ -0.2
VEGFA-216ENST00000512683 TIPINQ9BVW5 301 aa13.81□□□□□ -0.2
VEGFA-216ENST00000512683 CCDC94Q9BW85 323 aaPredicted RBP13.81□□□□□ -0.2
VEGFA-216ENST00000512683 BCO2Q9BYV7 579 aa13.81□□□□□ -0.2
VEGFA-216ENST00000512683 BHMT2Q9H2M3 363 aa13.81□□□□□ -0.2
VEGFA-216ENST00000512683 FBXO4Q9UKT5 387 aa13.81□□□□□ -0.2
VEGFA-216ENST00000512683 DNM3Q9UQ16 869 aa13.81□□□□□ -0.2
VEGFA-216ENST00000512683 SMIM28A0A1B0GU29 152 aa13.8□□□□□ -0.2
VEGFA-216ENST00000512683 ARHGEF37A1IGU5 675 aa13.8□□□□□ -0.2
VEGFA-216ENST00000512683 TTLL13PA6NNM8 815 aa13.8□□□□□ -0.2
VEGFA-216ENST00000512683 H7C4K7 107 aa13.8□□□□□ -0.2
VEGFA-216ENST00000512683 ZNF197O14709 1029 aa13.8□□□□□ -0.2
VEGFA-216ENST00000512683 SYN3O14994 580 aa13.8□□□□□ -0.2
VEGFA-216ENST00000512683 ECI2O75521 394 aa13.8□□□□□ -0.2
VEGFA-216ENST00000512683 SP9P0CG40 484 aa13.8□□□□□ -0.2
VEGFA-216ENST00000512683 CCT6AP40227 531 aaKnown RBP13.8□□□□□ -0.2
VEGFA-216ENST00000512683 PABPC1LQ4VXU2 614 aaKnown RBP13.8□□□□□ -0.2
VEGFA-216ENST00000512683 TTC38Q5R3I4 469 aa13.8□□□□□ -0.2
VEGFA-216ENST00000512683 NT5DC1Q5TFE4 455 aa13.8□□□□□ -0.2
VEGFA-216ENST00000512683 EEF1DP3Q658K8 133 aa13.8□□□□□ -0.2
VEGFA-216ENST00000512683 C4orf32Q8N8J7 132 aa13.8□□□□□ -0.2
VEGFA-216ENST00000512683 SLC7A14Q8TBB6 771 aa13.8□□□□□ -0.2
VEGFA-216ENST00000512683 FGF14Q92915 247 aa13.8□□□□□ -0.2
VEGFA-216ENST00000512683 PTPRHQ9HD43 1115 aa13.8□□□□□ -0.2
VEGFA-216ENST00000512683 KIAA1024Q9UPX6 916 aa13.8□□□□□ -0.2
VEGFA-216ENST00000512683 GDAQ9Y2T3 454 aa13.8□□□□□ -0.2
VEGFA-216ENST00000512683 EP300Q09472 2414 aaPredicted RBP13.8□□□□□ -0.2
VEGFA-216ENST00000512683 CCL16O15467 120 aa13.79□□□□□ -0.2
VEGFA-216ENST00000512683 ADAM12O43184 909 aa13.79□□□□□ -0.2
VEGFA-216ENST00000512683 ABLIM3O94929 683 aa13.79□□□□□ -0.2
VEGFA-216ENST00000512683 DCNP07585 359 aaKnown RBP13.79□□□□□ -0.2
VEGFA-216ENST00000512683 MCF2P10911 925 aa13.79□□□□□ -0.2
VEGFA-216ENST00000512683 KCNE1P15382 129 aa13.79□□□□□ -0.2
VEGFA-216ENST00000512683 PTPN2P17706 415 aa13.79□□□□□ -0.2
VEGFA-216ENST00000512683 U2AF2P26368 475 aaKnown RBP eCLIP13.79□□□□□ -0.2
VEGFA-216ENST00000512683 ELF1P32519 619 aa13.79□□□□□ -0.2
VEGFA-216ENST00000512683 CLCNKBP51801 687 aa13.79□□□□□ -0.2
VEGFA-216ENST00000512683 GNL2Q13823 731 aaKnown RBP13.79□□□□□ -0.2
VEGFA-216ENST00000512683 MLF2Q15773 248 aaPredicted RBP13.79□□□□□ -0.2
VEGFA-216ENST00000512683 KRT79Q5XKE5 535 aa13.79□□□□□ -0.2
VEGFA-216ENST00000512683 TPGS2Q68CL5 300 aa13.79□□□□□ -0.2
VEGFA-216ENST00000512683 MAMSTRQ6ZN01 415 aa13.79□□□□□ -0.2
VEGFA-216ENST00000512683 GPR161Q8N6U8 529 aaKnown RBP13.79□□□□□ -0.2
VEGFA-216ENST00000512683 IGSF22Q8N9C0 903 aa13.79□□□□□ -0.2
VEGFA-216ENST00000512683 ITFG1Q8TB96 612 aa13.79□□□□□ -0.2
VEGFA-216ENST00000512683 HASPINQ8TF76 798 aa13.79□□□□□ -0.2
VEGFA-216ENST00000512683 DRC1Q96MC2 740 aa13.79□□□□□ -0.2
VEGFA-216ENST00000512683 ACO2Q99798 780 aaKnown RBP13.79□□□□□ -0.2
VEGFA-216ENST00000512683 OXCT2Q9BYC2 517 aaPredicted RBP13.79□□□□□ -0.2
VEGFA-216ENST00000512683 MRPL4Q9BYD3 311 aaKnown RBP13.79□□□□□ -0.2
VEGFA-216ENST00000512683 DNMT3BQ9UBC3 853 aaKnown RBP13.79□□□□□ -0.2
VEGFA-216ENST00000512683 POLIQ9UNA4 740 aa13.79□□□□□ -0.2
VEGFA-216ENST00000512683 MRPS17Q9Y2R5 130 aaKnown RBP13.79□□□□□ -0.2
VEGFA-216ENST00000512683 MRPS23Q9Y3D9 190 aaKnown RBP13.79□□□□□ -0.2
VEGFA-216ENST00000512683 CDY1Q9Y6F8 540 aa13.79□□□□□ -0.2
VEGFA-216ENST00000512683 SPTBN4Q9H254 2564 aa13.79□□□□□ -0.2
VEGFA-216ENST00000512683 MYO15AQ9UKN7 3530 aa13.79□□□□□ -0.2
VEGFA-216ENST00000512683 TBC1D4O60343 1298 aa13.78□□□□□ -0.2
VEGFA-216ENST00000512683 CD2BP2O95400 341 aaKnown RBP13.78□□□□□ -0.2
VEGFA-216ENST00000512683 ATF2P15336 505 aa13.78□□□□□ -0.2
VEGFA-216ENST00000512683 LIG1P18858 919 aa13.78□□□□□ -0.2
VEGFA-216ENST00000512683 SCP2P22307 547 aa13.78□□□□□ -0.2
VEGFA-216ENST00000512683 PRPHP41219 470 aa13.78□□□□□ -0.2
VEGFA-216ENST00000512683 NPTX2P47972 431 aa13.78□□□□□ -0.2
VEGFA-216ENST00000512683 TOB1P50616 345 aaPredicted RBP13.78□□□□□ -0.2
VEGFA-216ENST00000512683 DMP1Q13316 513 aaPredicted RBP13.78□□□□□ -0.2
VEGFA-216ENST00000512683 MRPL58Q14197 206 aaKnown RBP13.78□□□□□ -0.2
VEGFA-216ENST00000512683 NBR1Q14596 966 aa13.78□□□□□ -0.2
VEGFA-216ENST00000512683 RABEP1Q15276 862 aa13.78□□□□□ -0.2
VEGFA-216ENST00000512683 ZBTB41Q5SVQ8 909 aa13.78□□□□□ -0.2
VEGFA-216ENST00000512683 CD300LGQ6UXG3 332 aa13.78□□□□□ -0.2
VEGFA-216ENST00000512683 NPAS3Q8IXF0 933 aa13.78□□□□□ -0.2
VEGFA-216ENST00000512683 TCEAL8Q8IYN2 117 aa13.78□□□□□ -0.2
VEGFA-216ENST00000512683 FAM184AQ8NB25 1140 aa13.78□□□□□ -0.2
VEGFA-216ENST00000512683 LEMD2Q8NC56 503 aa13.78□□□□□ -0.2
VEGFA-216ENST00000512683 RUBCNQ92622 972 aa13.78□□□□□ -0.2
VEGFA-216ENST00000512683 CLDN23Q96B33 292 aa13.78□□□□□ -0.2
VEGFA-216ENST00000512683 ACAP3Q96P50 834 aa13.78□□□□□ -0.2
VEGFA-216ENST00000512683 RPP25Q9BUL9 199 aaKnown RBP13.78□□□□□ -0.2
VEGFA-216ENST00000512683 TRPV5Q9NQA5 729 aa13.78□□□□□ -0.2
VEGFA-216ENST00000512683 ARHGAP28Q9P2N2 729 aa13.78□□□□□ -0.2
VEGFA-216ENST00000512683 FAM170BA6NMN3 283 aa13.77□□□□□ -0.21
VEGFA-216ENST00000512683 CCDC169A6NNP5 214 aa13.77□□□□□ -0.21
VEGFA-216ENST00000512683 SPTLC1O15269 473 aa13.77□□□□□ -0.21
VEGFA-216ENST00000512683 LAMTOR5O43504 91 aa13.77□□□□□ -0.21
VEGFA-216ENST00000512683 SDHBP21912 280 aa13.77□□□□□ -0.21
VEGFA-216ENST00000512683 PROZP22891 400 aa13.77□□□□□ -0.21
VEGFA-216ENST00000512683 PAX3P23760 479 aa13.77□□□□□ -0.21
VEGFA-216ENST00000512683 RPS9P46781 194 aaKnown RBP13.77□□□□□ -0.21
VEGFA-216ENST00000512683 PEX3P56589 373 aa13.77□□□□□ -0.21
VEGFA-216ENST00000512683 NTHL1P78549 312 aa13.77□□□□□ -0.21
VEGFA-216ENST00000512683 SNW1Q13573 536 aaKnown RBP13.77□□□□□ -0.21
VEGFA-216ENST00000512683 ECM1Q16610 540 aa13.77□□□□□ -0.21
VEGFA-216ENST00000512683 SPECC1Q5M775 1068 aa13.77□□□□□ -0.21
VEGFA-216ENST00000512683 ZNF852Q6ZMS4 543 aa13.77□□□□□ -0.21
VEGFA-216ENST00000512683 APPL2Q8NEU8 664 aa13.77□□□□□ -0.21
VEGFA-216ENST00000512683 SPIRE2Q8WWL2 714 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms