RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 RAB33AQ14088 237 aa16.13■□□□□ 0.17
CCHCR1-229ENST00000512418 XKR4Q5GH76 650 aa16.13■□□□□ 0.17
CCHCR1-229ENST00000512418 MCTP1Q6DN14 999 aa16.13■□□□□ 0.17
CCHCR1-229ENST00000512418 TAS1R3Q7RTX0 852 aa16.13■□□□□ 0.17
CCHCR1-229ENST00000512418 KCNK18Q7Z418 384 aa16.13■□□□□ 0.17
CCHCR1-229ENST00000512418 KCTD17Q8N5Z5 321 aa16.13■□□□□ 0.17
CCHCR1-229ENST00000512418 SLC7A14Q8TBB6 771 aa16.13■□□□□ 0.17
CCHCR1-229ENST00000512418 TARS2Q9BW92 718 aaKnown RBP16.13■□□□□ 0.17
CCHCR1-229ENST00000512418 GOLGA2P5Q9HBQ8 144 aa16.13■□□□□ 0.17
CCHCR1-229ENST00000512418 SLC38A7Q9NVC3 462 aa16.13■□□□□ 0.17
CCHCR1-229ENST00000512418 KCNG1Q9UIX4 513 aa16.13■□□□□ 0.17
CCHCR1-229ENST00000512418 PI15O43692 258 aa16.12■□□□□ 0.17
CCHCR1-229ENST00000512418 CENPBP07199 599 aaPredicted RBP16.12■□□□□ 0.17
CCHCR1-229ENST00000512418 MCF2P10911 925 aa16.12■□□□□ 0.17
CCHCR1-229ENST00000512418 PROZP22891 400 aa16.12■□□□□ 0.17
CCHCR1-229ENST00000512418 IGFBP6P24592 240 aaPredicted RBP16.12■□□□□ 0.17
CCHCR1-229ENST00000512418 GUCY2CP25092 1073 aa16.12■□□□□ 0.17
CCHCR1-229ENST00000512418 NBL1P41271 181 aa16.12■□□□□ 0.17
CCHCR1-229ENST00000512418 OSTNP61366 133 aa16.12■□□□□ 0.17
CCHCR1-229ENST00000512418 SOX4Q06945 474 aaPredicted RBP16.12■□□□□ 0.17
CCHCR1-229ENST00000512418 UVSSAQ2YD98 709 aa16.12■□□□□ 0.17
CCHCR1-229ENST00000512418 HYIQ5T013 277 aa16.12■□□□□ 0.17
CCHCR1-229ENST00000512418 AXDND1Q5T1B0 1012 aaPredicted RBP16.12■□□□□ 0.17
CCHCR1-229ENST00000512418 MPZL3Q6UWV2 235 aa16.12■□□□□ 0.17
CCHCR1-229ENST00000512418 CD300LGQ6UXG3 332 aa16.12■□□□□ 0.17
CCHCR1-229ENST00000512418 ALKAL1Q6UXT8 129 aa16.12■□□□□ 0.17
CCHCR1-229ENST00000512418 ANKS3Q6ZW76 656 aa16.12■□□□□ 0.17
CCHCR1-229ENST00000512418 RTL10Q7L3V2 364 aa16.12■□□□□ 0.17
CCHCR1-229ENST00000512418 CCDC105Q8IYK2 499 aa16.12■□□□□ 0.17
CCHCR1-229ENST00000512418 C3orf58Q8NDZ4 430 aa16.12■□□□□ 0.17
CCHCR1-229ENST00000512418 DDX27Q96GQ7 796 aaKnown RBP16.12■□□□□ 0.17
CCHCR1-229ENST00000512418 NTPCRQ9BSD7 190 aaKnown RBP16.12■□□□□ 0.17
CCHCR1-229ENST00000512418 TCHPQ9BT92 498 aa16.12■□□□□ 0.17
CCHCR1-229ENST00000512418 CDH7Q9ULB5 785 aa16.12■□□□□ 0.17
CCHCR1-229ENST00000512418 BACE2Q9Y5Z0 518 aa16.12■□□□□ 0.17
CCHCR1-229ENST00000512418 CDY1Q9Y6F8 540 aa16.12■□□□□ 0.17
CCHCR1-229ENST00000512418 NUMBLQ9Y6R0 609 aa16.12■□□□□ 0.17
CCHCR1-229ENST00000512418 DMDP11532 3685 aa16.12■□□□□ 0.17
CCHCR1-229ENST00000512418 VPS13AQ96RL7 3174 aa16.12■□□□□ 0.17
CCHCR1-229ENST00000512418 KRBA1A5PL33 1030 aa16.11■□□□□ 0.17
CCHCR1-229ENST00000512418 SLC16A4O15374 487 aa16.11■□□□□ 0.17
CCHCR1-229ENST00000512418 CCL16O15467 120 aa16.11■□□□□ 0.17
CCHCR1-229ENST00000512418 RFX1P22670 979 aa16.11■□□□□ 0.17
CCHCR1-229ENST00000512418 TKTP29401 623 aaKnown RBP16.11■□□□□ 0.17
CCHCR1-229ENST00000512418 NTHL1P78549 312 aa16.11■□□□□ 0.17
CCHCR1-229ENST00000512418 ZRSR1Q15695 479 aaKnown RBP16.11■□□□□ 0.17
CCHCR1-229ENST00000512418 SPIRE2Q8WWL2 714 aa16.11■□□□□ 0.17
CCHCR1-229ENST00000512418 SNX27Q96L92 541 aa16.11■□□□□ 0.17
CCHCR1-229ENST00000512418 ACAP3Q96P50 834 aa16.11■□□□□ 0.17
CCHCR1-229ENST00000512418 SLC2A4RGQ9NR83 387 aa16.11■□□□□ 0.17
CCHCR1-229ENST00000512418 KCND2Q9NZV8 630 aa16.11■□□□□ 0.17
CCHCR1-229ENST00000512418 CNTN3Q9P232 1028 aa16.11■□□□□ 0.17
CCHCR1-229ENST00000512418 CA14Q9ULX7 337 aa16.11■□□□□ 0.17
CCHCR1-229ENST00000512418 POLIQ9UNA4 740 aa16.11■□□□□ 0.17
CCHCR1-229ENST00000512418 ZFHX2Q9C0A1 2572 aaPredicted RBP16.11■□□□□ 0.17
CCHCR1-229ENST00000512418 DOCK6Q96HP0 2047 aa16.11■□□□□ 0.17
CCHCR1-229ENST00000512418 CFAP54Q96N23 3096 aa16.1■□□□□ 0.17
CCHCR1-229ENST00000512418 STK25O00506 426 aa16.1■□□□□ 0.17
CCHCR1-229ENST00000512418 PODXLO00592 558 aa16.1■□□□□ 0.17
CCHCR1-229ENST00000512418 ABLIM1O14639 778 aa16.1■□□□□ 0.17
CCHCR1-229ENST00000512418 TOM1L1O75674 476 aa16.1■□□□□ 0.17
CCHCR1-229ENST00000512418 PLS3P13797 630 aa16.1■□□□□ 0.17
CCHCR1-229ENST00000512418 KCNE1P15382 129 aa16.1■□□□□ 0.17
CCHCR1-229ENST00000512418 BRCC3P46736 316 aa16.1■□□□□ 0.17
CCHCR1-229ENST00000512418 STRN3Q13033 797 aa16.1■□□□□ 0.17
CCHCR1-229ENST00000512418 RSPO2Q6UXX9 243 aaPredicted RBP16.1■□□□□ 0.17
CCHCR1-229ENST00000512418 MTSS1LQ765P7 747 aa16.1■□□□□ 0.17
CCHCR1-229ENST00000512418 SYT2Q8N9I0 419 aaPredicted RBP16.1■□□□□ 0.17
CCHCR1-229ENST00000512418 GPR152Q8TDT2 470 aa16.1■□□□□ 0.17
CCHCR1-229ENST00000512418 FGF13Q92913 245 aa16.1■□□□□ 0.17
CCHCR1-229ENST00000512418 TMX3Q96JJ7 454 aa16.1■□□□□ 0.17
CCHCR1-229ENST00000512418 ZMAT2Q96NC0 199 aaKnown RBP16.1■□□□□ 0.17
CCHCR1-229ENST00000512418 ARHGEF3Q9NR81 526 aa16.1■□□□□ 0.17
CCHCR1-229ENST00000512418 CITO14578 2027 aa16.1■□□□□ 0.17
CCHCR1-229ENST00000512418 VWA3AA6NCI4 1184 aa16.09■□□□□ 0.17
CCHCR1-229ENST00000512418 SFI1A8K8P3 1242 aa16.09■□□□□ 0.17
CCHCR1-229ENST00000512418 H3BQV1 296 aa16.09■□□□□ 0.17
CCHCR1-229ENST00000512418 I3L4J1 428 aa16.09■□□□□ 0.17
CCHCR1-229ENST00000512418 GJB2P29033 226 aa16.09■□□□□ 0.17
CCHCR1-229ENST00000512418 RPL9P32969 192 aaKnown RBP16.09■□□□□ 0.17
CCHCR1-229ENST00000512418 SMTNP53814 917 aa16.09■□□□□ 0.17
CCHCR1-229ENST00000512418 SLC12A3P55017 1021 aa16.09■□□□□ 0.17
CCHCR1-229ENST00000512418 RAD51AP2Q09MP3 1159 aa16.09■□□□□ 0.17
CCHCR1-229ENST00000512418 NOLC1Q14978 699 aaKnown RBP eCLIP16.09■□□□□ 0.17
CCHCR1-229ENST00000512418 ARL6IP4Q66PJ3 421 aaKnown RBP16.09■□□□□ 0.17
CCHCR1-229ENST00000512418 SLC8B1Q6J4K2 584 aa16.09■□□□□ 0.17
CCHCR1-229ENST00000512418 PHLDB3Q6NSJ2 640 aa16.09■□□□□ 0.17
CCHCR1-229ENST00000512418 DTWD2Q8NBA8 298 aa16.09■□□□□ 0.17
CCHCR1-229ENST00000512418 TMEM161BQ8NDZ6 487 aa16.09■□□□□ 0.17
CCHCR1-229ENST00000512418 FGF14Q92915 247 aa16.09■□□□□ 0.17
CCHCR1-229ENST00000512418 CDK5RAP3Q96JB5 506 aa16.09■□□□□ 0.17
CCHCR1-229ENST00000512418 PNMA5Q96PV4 448 aa16.09■□□□□ 0.17
CCHCR1-229ENST00000512418 TBC1D17Q9HA65 648 aa16.09■□□□□ 0.17
CCHCR1-229ENST00000512418 ANKFY1Q9P2R3 1169 aa16.09■□□□□ 0.17
CCHCR1-229ENST00000512418 KCNH3Q9ULD8 1083 aa16.09■□□□□ 0.17
CCHCR1-229ENST00000512418 MYH11P35749 1972 aa16.08■□□□□ 0.16
CCHCR1-229ENST00000512418 PRR23AA6NEV1 266 aa16.08■□□□□ 0.16
CCHCR1-229ENST00000512418 SYN3O14994 580 aa16.08■□□□□ 0.16
CCHCR1-229ENST00000512418 MAPTP10636 758 aaKnown RBP16.08■□□□□ 0.16
CCHCR1-229ENST00000512418 HARSP12081 509 aaKnown RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms