RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 DDR1Q08345 913 aa6.86□□□□□ -1.31
CHD1-208ENST00000512392 TFCP2Q12800 502 aa6.86□□□□□ -1.31
CHD1-208ENST00000512392 EIF2B5Q13144 721 aaKnown RBP6.86□□□□□ -1.31
CHD1-208ENST00000512392 TMEM201Q5SNT2 666 aa6.86□□□□□ -1.31
CHD1-208ENST00000512392 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.86□□□□□ -1.31
CHD1-208ENST00000512392 RNF168Q8IYW5 571 aaPredicted RBP6.86□□□□□ -1.31
CHD1-208ENST00000512392 CCAR2Q8N163 923 aaKnown RBP6.86□□□□□ -1.31
CHD1-208ENST00000512392 AGBL5Q8NDL9 886 aa6.86□□□□□ -1.31
CHD1-208ENST00000512392 GDAP1Q8TB36 358 aa6.86□□□□□ -1.31
CHD1-208ENST00000512392 CABS1Q96KC9 395 aa6.86□□□□□ -1.31
CHD1-208ENST00000512392 MFSD14AQ96MC6 490 aa6.86□□□□□ -1.31
CHD1-208ENST00000512392 PDCD2LQ9BRP1 358 aa6.86□□□□□ -1.31
CHD1-208ENST00000512392 MRPL18Q9H0U6 180 aaKnown RBP6.86□□□□□ -1.31
CHD1-208ENST00000512392 EPS8L2Q9H6S3 715 aa6.86□□□□□ -1.31
CHD1-208ENST00000512392 PDE7BQ9NP56 450 aa6.86□□□□□ -1.31
CHD1-208ENST00000512392 NR2E3Q9Y5X4 410 aa6.86□□□□□ -1.31
CHD1-208ENST00000512392 THAP12O43422 761 aa6.85□□□□□ -1.31
CHD1-208ENST00000512392 UBOX5O94941 541 aa6.85□□□□□ -1.31
CHD1-208ENST00000512392 SNRNP70P08621 437 aaKnown RBP6.85□□□□□ -1.31
CHD1-208ENST00000512392 ZNF865P0CJ78 1059 aaPredicted RBP6.85□□□□□ -1.31
CHD1-208ENST00000512392 C6P13671 934 aa6.85□□□□□ -1.31
CHD1-208ENST00000512392 TMOD1P28289 359 aa6.85□□□□□ -1.31
CHD1-208ENST00000512392 CCT4P50991 539 aaKnown RBP6.85□□□□□ -1.31
CHD1-208ENST00000512392 FMO1Q01740 532 aa6.85□□□□□ -1.31
CHD1-208ENST00000512392 CREB5Q02930 508 aa6.85□□□□□ -1.31
CHD1-208ENST00000512392 DAG1Q14118 895 aa6.85□□□□□ -1.31
CHD1-208ENST00000512392 PIWIL3Q7Z3Z3 882 aaKnown RBP6.85□□□□□ -1.31
CHD1-208ENST00000512392 THEMISQ8N1K5 641 aaPredicted RBP6.85□□□□□ -1.31
CHD1-208ENST00000512392 PTP4A1Q93096 173 aa6.85□□□□□ -1.31
CHD1-208ENST00000512392 CELF4Q9BZC1 486 aaKnown RBP6.85□□□□□ -1.31
CHD1-208ENST00000512392 ZDHHC5Q9C0B5 715 aa6.85□□□□□ -1.31
CHD1-208ENST00000512392 DECR2Q9NUI1 292 aa6.85□□□□□ -1.31
CHD1-208ENST00000512392 SEPT11Q9NVA2 429 aaKnown RBP6.85□□□□□ -1.31
CHD1-208ENST00000512392 CPSF2Q9P2I0 782 aaKnown RBP6.85□□□□□ -1.31
CHD1-208ENST00000512392 MOSPD1Q9UJG1 213 aa6.85□□□□□ -1.31
CHD1-208ENST00000512392 EDARQ9UNE0 448 aa6.85□□□□□ -1.31
CHD1-208ENST00000512392 TRIM17Q9Y577 477 aa6.85□□□□□ -1.31
CHD1-208ENST00000512392 NPFFR2Q9Y5X5 522 aa6.85□□□□□ -1.31
CHD1-208ENST00000512392 AGAP14A8MT82 685 aa6.84□□□□□ -1.31
CHD1-208ENST00000512392 SNRPB2P08579 225 aaKnown RBP6.84□□□□□ -1.31
CHD1-208ENST00000512392 HNRNPA1P09651 372 aaKnown RBP eCLIP6.84□□□□□ -1.31
CHD1-208ENST00000512392 MSL3P1P0C860 447 aa6.84□□□□□ -1.31
CHD1-208ENST00000512392 ECI1P42126 302 aa6.84□□□□□ -1.31
CHD1-208ENST00000512392 MTHFRP42898 656 aa6.84□□□□□ -1.31
CHD1-208ENST00000512392 MXI1P50539 228 aa6.84□□□□□ -1.31
CHD1-208ENST00000512392 GSTM4Q03013 218 aa6.84□□□□□ -1.31
CHD1-208ENST00000512392 NFE2L1Q14494 772 aa6.84□□□□□ -1.31
CHD1-208ENST00000512392 FLYWCH1Q4VC44 716 aa6.84□□□□□ -1.31
CHD1-208ENST00000512392 MEX3CQ5U5Q3 659 aaKnown RBP6.84□□□□□ -1.31
CHD1-208ENST00000512392 NAA16Q6N069 864 aaPredicted RBP6.84□□□□□ -1.31
CHD1-208ENST00000512392 SHISA2Q6UWI4 295 aa6.84□□□□□ -1.31
CHD1-208ENST00000512392 ARHGEF18Q6ZSZ5 1173 aa6.84□□□□□ -1.31
CHD1-208ENST00000512392 BEND5Q7L4P6 421 aa6.84□□□□□ -1.31
CHD1-208ENST00000512392 R3HCC1LQ7Z5L2 792 aaKnown RBP6.84□□□□□ -1.31
CHD1-208ENST00000512392 RALYLQ86SE5 291 aaKnown RBP6.84□□□□□ -1.31
CHD1-208ENST00000512392 RIOX2Q8IUF8 465 aa6.84□□□□□ -1.31
CHD1-208ENST00000512392 TMEM151BQ8IW70 566 aa6.84□□□□□ -1.31
CHD1-208ENST00000512392 TXLNBQ8N3L3 684 aa6.84□□□□□ -1.31
CHD1-208ENST00000512392 RUBCNQ92622 972 aa6.84□□□□□ -1.31
CHD1-208ENST00000512392 CHFRQ96EP1 664 aa6.84□□□□□ -1.31
CHD1-208ENST00000512392 PPP1R13BQ96KQ4 1090 aa6.84□□□□□ -1.31
CHD1-208ENST00000512392 CCDC74BQ96LY2 380 aa6.84□□□□□ -1.31
CHD1-208ENST00000512392 ZDHHC15Q96MV8 337 aa6.84□□□□□ -1.31
CHD1-208ENST00000512392 ZC3H12CQ9C0D7 883 aaKnown RBP6.84□□□□□ -1.31
CHD1-208ENST00000512392 QRSL1Q9H0R6 528 aaKnown RBP6.84□□□□□ -1.31
CHD1-208ENST00000512392 MLXIPQ9HAP2 919 aa6.84□□□□□ -1.31
CHD1-208ENST00000512392 PNPLA8Q9NP80 782 aa6.84□□□□□ -1.31
CHD1-208ENST00000512392 TBCCD1Q9NVR7 557 aa6.84□□□□□ -1.31
CHD1-208ENST00000512392 KCNK4Q9NYG8 393 aa6.84□□□□□ -1.31
CHD1-208ENST00000512392 IGSF9Q9P2J2 1179 aa6.84□□□□□ -1.31
CHD1-208ENST00000512392 ZMAT5Q9UDW3 170 aaKnown RBP6.84□□□□□ -1.31
CHD1-208ENST00000512392 HPCAL4Q9UM19 191 aa6.84□□□□□ -1.31
CHD1-208ENST00000512392 CLCA2Q9UQC9 943 aa6.84□□□□□ -1.31
CHD1-208ENST00000512392 PIAS3Q9Y6X2 628 aa6.84□□□□□ -1.31
CHD1-208ENST00000512392 K7EPI3 171 aa6.84□□□□□ -1.32
CHD1-208ENST00000512392 SHOXO15266 292 aa6.84□□□□□ -1.32
CHD1-208ENST00000512392 TXNL1O43396 289 aa6.84□□□□□ -1.32
CHD1-208ENST00000512392 KDM1AO60341 852 aa6.84□□□□□ -1.32
CHD1-208ENST00000512392 KERAO60938 352 aa6.84□□□□□ -1.32
CHD1-208ENST00000512392 NR2F1P10589 423 aa6.84□□□□□ -1.32
CHD1-208ENST00000512392 MLH1P40692 756 aa6.84□□□□□ -1.32
CHD1-208ENST00000512392 TKTL1P51854 596 aa6.84□□□□□ -1.32
CHD1-208ENST00000512392 C21orf58P58505 322 aa6.84□□□□□ -1.32
CHD1-208ENST00000512392 RBP5P82980 135 aa6.84□□□□□ -1.32
CHD1-208ENST00000512392 UBE3AQ05086 875 aa6.84□□□□□ -1.32
CHD1-208ENST00000512392 ACTN3Q08043 901 aaPredicted RBP6.84□□□□□ -1.32
CHD1-208ENST00000512392 SNAPC2Q13487 334 aa6.84□□□□□ -1.32
CHD1-208ENST00000512392 CUL4BQ13620 913 aa6.84□□□□□ -1.32
CHD1-208ENST00000512392 PLS1Q14651 629 aa6.84□□□□□ -1.32
CHD1-208ENST00000512392 OASLQ15646 514 aaKnown RBP6.84□□□□□ -1.32
CHD1-208ENST00000512392 ADIPOQQ15848 244 aa6.84□□□□□ -1.32
CHD1-208ENST00000512392 TSPYL5Q86VY4 417 aaPredicted RBP6.84□□□□□ -1.32
CHD1-208ENST00000512392 TMEM130Q8N3G9 435 aa6.84□□□□□ -1.32
CHD1-208ENST00000512392 ELF4Q99607 663 aaPredicted RBP6.84□□□□□ -1.32
CHD1-208ENST00000512392 HGH1Q9BTY7 390 aa6.84□□□□□ -1.32
CHD1-208ENST00000512392 ITPAQ9BY32 194 aa6.84□□□□□ -1.32
CHD1-208ENST00000512392 NDST4Q9H3R1 872 aa6.84□□□□□ -1.32
CHD1-208ENST00000512392 INTS10Q9NVR2 710 aaKnown RBP6.84□□□□□ -1.32
CHD1-208ENST00000512392 CACNA2D2Q9NY47 1150 aa6.84□□□□□ -1.32
CHD1-208ENST00000512392 C5AR2Q9P296 337 aa6.84□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms