RNA–Protein interactions for RNA: ENST00000512040.1

MATR3-219, Transcript of matrin 3, humanhuman

TSL 3

Gene MATR3, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-219ENST00000512040 OPN1MW3P0DN78 364 aa4.82□□□□□ -1.64
MATR3-219ENST00000512040 CHMLP26374 656 aa4.82□□□□□ -1.64
MATR3-219ENST00000512040 NOS3P29474 1203 aa4.82□□□□□ -1.64
MATR3-219ENST00000512040 IREB2P48200 963 aaKnown RBP4.82□□□□□ -1.64
MATR3-219ENST00000512040 CDR1P51861 262 aa4.82□□□□□ -1.64
MATR3-219ENST00000512040 CLNS1AP54105 237 aaKnown RBP4.82□□□□□ -1.64
MATR3-219ENST00000512040 AK2P54819 239 aa4.82□□□□□ -1.64
MATR3-219ENST00000512040 BASP1P80723 227 aaKnown RBP4.82□□□□□ -1.64
MATR3-219ENST00000512040 TSPY1Q01534 308 aa4.82□□□□□ -1.64
MATR3-219ENST00000512040 RUNX1T1Q06455 604 aa4.82□□□□□ -1.64
MATR3-219ENST00000512040 G3BP1Q13283 466 aaKnown RBP eCLIP4.82□□□□□ -1.64
MATR3-219ENST00000512040 IFIT5Q13325 482 aaKnown RBP4.82□□□□□ -1.64
MATR3-219ENST00000512040 MTMR1Q13613 665 aa4.82□□□□□ -1.64
MATR3-219ENST00000512040 MINDY4Q4G0A6 757 aa4.82□□□□□ -1.64
MATR3-219ENST00000512040 HABP4Q5JVS0 413 aaKnown RBP4.82□□□□□ -1.64
MATR3-219ENST00000512040 AKNAD1Q5T1N1 836 aa4.82□□□□□ -1.64
MATR3-219ENST00000512040 GPATCH4Q5T3I0 446 aaKnown RBP4.82□□□□□ -1.64
MATR3-219ENST00000512040 METTL11BQ5VVY1 283 aa4.82□□□□□ -1.64
MATR3-219ENST00000512040 TPGS2Q68CL5 300 aa4.82□□□□□ -1.64
MATR3-219ENST00000512040 ATF7IPQ6VMQ6 1270 aa4.82□□□□□ -1.64
MATR3-219ENST00000512040 PLEKHM3Q6ZWE6 761 aa4.82□□□□□ -1.64
MATR3-219ENST00000512040 IKBIPQ70UQ0 350 aa4.82□□□□□ -1.64
MATR3-219ENST00000512040 B4GALNT4Q76KP1 1039 aa4.82□□□□□ -1.64
MATR3-219ENST00000512040 TXNRD3Q86VQ6 643 aa4.82□□□□□ -1.64
MATR3-219ENST00000512040 PPFIBP1Q86W92 1011 aa4.82□□□□□ -1.64
MATR3-219ENST00000512040 FCHSD1Q86WN1 690 aa4.82□□□□□ -1.64
MATR3-219ENST00000512040 FAM114A1Q8IWE2 563 aa4.82□□□□□ -1.64
MATR3-219ENST00000512040 LRRC71Q8N4P6 559 aa4.82□□□□□ -1.64
MATR3-219ENST00000512040 C1orf127Q8N9H9 656 aa4.82□□□□□ -1.64
MATR3-219ENST00000512040 AGBL3Q8NEM8 1001 aa4.82□□□□□ -1.64
MATR3-219ENST00000512040 IPMKQ8NFU5 416 aa4.82□□□□□ -1.64
MATR3-219ENST00000512040 SNX29Q8TEQ0 813 aa4.82□□□□□ -1.64
MATR3-219ENST00000512040 ANKRD7Q92527 254 aa4.82□□□□□ -1.64
MATR3-219ENST00000512040 FATE1Q969F0 183 aa4.82□□□□□ -1.64
MATR3-219ENST00000512040 NSUN5Q96P11 429 aaKnown RBP4.82□□□□□ -1.64
MATR3-219ENST00000512040 TCF12Q99081 682 aa4.82□□□□□ -1.64
MATR3-219ENST00000512040 TREX2Q9BQ50 279 aaPredicted RBP4.82□□□□□ -1.64
MATR3-219ENST00000512040 GPATCH1Q9BRR8 931 aaKnown RBP4.82□□□□□ -1.64
MATR3-219ENST00000512040 UQCC2Q9BRT2 126 aa4.82□□□□□ -1.64
MATR3-219ENST00000512040 SRCIN1Q9C0H9 1055 aa4.82□□□□□ -1.64
MATR3-219ENST00000512040 CLSTN2Q9H4D0 955 aa4.82□□□□□ -1.64
MATR3-219ENST00000512040 SMARCAD1Q9H4L7 1026 aa4.82□□□□□ -1.64
MATR3-219ENST00000512040 FBRSQ9HAH7 460 aa4.82□□□□□ -1.64
MATR3-219ENST00000512040 PARVGQ9HBI0 331 aa4.82□□□□□ -1.64
MATR3-219ENST00000512040 ATP13A1Q9HD20 1204 aa4.82□□□□□ -1.64
MATR3-219ENST00000512040 GPR108Q9NPR9 543 aa4.82□□□□□ -1.64
MATR3-219ENST00000512040 PRDM5Q9NQX1 630 aaPredicted RBP4.82□□□□□ -1.64
MATR3-219ENST00000512040 SEPT11Q9NVA2 429 aaKnown RBP4.82□□□□□ -1.64
MATR3-219ENST00000512040 USP40Q9NVE5 1235 aa4.82□□□□□ -1.64
MATR3-219ENST00000512040 DNAJB12Q9NXW2 375 aaKnown RBP4.82□□□□□ -1.64
MATR3-219ENST00000512040 TLR7Q9NYK1 1049 aaKnown RBP4.82□□□□□ -1.64
MATR3-219ENST00000512040 UBAP1Q9NZ09 502 aa4.82□□□□□ -1.64
MATR3-219ENST00000512040 PRKAG3Q9UGI9 489 aa4.82□□□□□ -1.64
MATR3-219ENST00000512040 GGT7Q9UJ14 662 aa4.82□□□□□ -1.64
MATR3-219ENST00000512040 RIMKLBQ9ULI2 386 aa4.82□□□□□ -1.64
MATR3-219ENST00000512040 HPCAL4Q9UM19 191 aa4.82□□□□□ -1.64
MATR3-219ENST00000512040 MAPRE3Q9UPY8 281 aa4.82□□□□□ -1.64
MATR3-219ENST00000512040 DAGLAQ9Y4D2 1042 aa4.82□□□□□ -1.64
MATR3-219ENST00000512040 AK5Q9Y6K8 562 aa4.82□□□□□ -1.64
MATR3-219ENST00000512040 REV3LO60673 3130 aa4.81□□□□□ -1.64
MATR3-219ENST00000512040 IRS2Q9Y4H2 1338 aa4.81□□□□□ -1.64
MATR3-219ENST00000512040 ARPC4-TTLL3A0A0A6YYG9 625 aa4.81□□□□□ -1.64
MATR3-219ENST00000512040 CCDC169A6NNP5 214 aa4.81□□□□□ -1.64
MATR3-219ENST00000512040 PHF20L1A8MW92 1017 aa4.81□□□□□ -1.64
MATR3-219ENST00000512040 H7C0S8 307 aa4.81□□□□□ -1.64
MATR3-219ENST00000512040 CACNB4O00305 520 aaPredicted RBP4.81□□□□□ -1.64
MATR3-219ENST00000512040 EREGO14944 169 aa4.81□□□□□ -1.64
MATR3-219ENST00000512040 CETN3O15182 167 aa4.81□□□□□ -1.64
MATR3-219ENST00000512040 PDPK1O15530 556 aa4.81□□□□□ -1.64
MATR3-219ENST00000512040 SART1O43290 800 aaKnown RBP4.81□□□□□ -1.64
MATR3-219ENST00000512040 SIN3BO75182 1162 aa4.81□□□□□ -1.64
MATR3-219ENST00000512040 OFD1O75665 1012 aa4.81□□□□□ -1.64
MATR3-219ENST00000512040 DNTTP04053 509 aa4.81□□□□□ -1.64
MATR3-219ENST00000512040 POLR3DP05423 398 aaPredicted RBP4.81□□□□□ -1.64
MATR3-219ENST00000512040 CSF1RP07333 972 aa4.81□□□□□ -1.64
MATR3-219ENST00000512040 VIMP08670 466 aaKnown RBP4.81□□□□□ -1.64
MATR3-219ENST00000512040 CES1P23141 567 aa4.81□□□□□ -1.64
MATR3-219ENST00000512040 PBLDP30039 288 aaPredicted RBP4.81□□□□□ -1.64
MATR3-219ENST00000512040 ELF1P32519 619 aa4.81□□□□□ -1.64
MATR3-219ENST00000512040 MCM5P33992 734 aa4.81□□□□□ -1.64
MATR3-219ENST00000512040 GRIK1P39086 918 aa4.81□□□□□ -1.64
MATR3-219ENST00000512040 KCNJ6P48051 423 aa4.81□□□□□ -1.64
MATR3-219ENST00000512040 CCT4P50991 539 aaKnown RBP4.81□□□□□ -1.64
MATR3-219ENST00000512040 PLAURQ03405 335 aa4.81□□□□□ -1.64
MATR3-219ENST00000512040 PPIDQ08752 370 aaKnown RBP4.81□□□□□ -1.64
MATR3-219ENST00000512040 FAPQ12884 760 aa4.81□□□□□ -1.64
MATR3-219ENST00000512040 GRIK3Q13003 919 aa4.81□□□□□ -1.64
MATR3-219ENST00000512040 TUBA3CQ13748 450 aa4.81□□□□□ -1.64
MATR3-219ENST00000512040 TRIM71Q2Q1W2 868 aaKnown RBP4.81□□□□□ -1.64
MATR3-219ENST00000512040 CCDC57Q2TAC2 916 aa4.81□□□□□ -1.64
MATR3-219ENST00000512040 TUBB8Q3ZCM7 444 aa4.81□□□□□ -1.64
MATR3-219ENST00000512040 KCNT1Q5JUK3 1230 aa4.81□□□□□ -1.64
MATR3-219ENST00000512040 BEND3Q5T5X7 828 aa4.81□□□□□ -1.64
MATR3-219ENST00000512040 GPR158Q5T848 1215 aa4.81□□□□□ -1.64
MATR3-219ENST00000512040 ITPRIPL1Q6GPH6 555 aa4.81□□□□□ -1.64
MATR3-219ENST00000512040 CAPRIN2Q6IMN6 1127 aaKnown RBP4.81□□□□□ -1.64
MATR3-219ENST00000512040 LIN54Q6MZP7 749 aa4.81□□□□□ -1.64
MATR3-219ENST00000512040 C8orf74Q6P047 294 aa4.81□□□□□ -1.64
MATR3-219ENST00000512040 C11orf88Q6PI97 169 aa4.81□□□□□ -1.64
MATR3-219ENST00000512040 HFE2Q6ZVN8 426 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms