RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 HNRNPDLO14979 420 aaKnown RBP17.61■□□□□ 0.41
PDLIM5-216ENST00000511767 OGTO15294 1046 aa17.61■□□□□ 0.41
PDLIM5-216ENST00000511767 B3GAT3O94766 335 aa17.61■□□□□ 0.41
PDLIM5-216ENST00000511767 KIF4AO95239 1232 aa17.61■□□□□ 0.41
PDLIM5-216ENST00000511767 URODP06132 367 aa17.61■□□□□ 0.41
PDLIM5-216ENST00000511767 SRGAP2BP0DMP2 458 aa17.61■□□□□ 0.41
PDLIM5-216ENST00000511767 IDEP14735 1019 aa17.61■□□□□ 0.41
PDLIM5-216ENST00000511767 RPL9P32969 192 aaKnown RBP17.61■□□□□ 0.41
PDLIM5-216ENST00000511767 TNFSF9P41273 254 aa17.61■□□□□ 0.41
PDLIM5-216ENST00000511767 MATR3P43243 847 aaKnown RBP eCLIP17.61■□□□□ 0.412e-6■■■■□ 23.9
PDLIM5-216ENST00000511767 CLCN4P51793 760 aa17.61■□□□□ 0.41
PDLIM5-216ENST00000511767 AMPD3Q01432 767 aa17.61■□□□□ 0.41
PDLIM5-216ENST00000511767 ZP2Q05996 745 aa17.61■□□□□ 0.41
PDLIM5-216ENST00000511767 KYAT1Q16773 422 aa17.61■□□□□ 0.41
PDLIM5-216ENST00000511767 ZBTB41Q5SVQ8 909 aa17.61■□□□□ 0.41
PDLIM5-216ENST00000511767 FAM171A1Q5VUB5 890 aa17.61■□□□□ 0.41
PDLIM5-216ENST00000511767 ADALQ6DHV7 355 aa17.61■□□□□ 0.41
PDLIM5-216ENST00000511767 KANK3Q6NY19 840 aa17.61■□□□□ 0.41
PDLIM5-216ENST00000511767 CNNM4Q6P4Q7 775 aa17.61■□□□□ 0.41
PDLIM5-216ENST00000511767 ADHFE1Q8IWW8 467 aa17.61■□□□□ 0.41
PDLIM5-216ENST00000511767 C18orf25Q96B23 403 aaPredicted RBP17.61■□□□□ 0.41
PDLIM5-216ENST00000511767 UROC1Q96N76 676 aa17.61■□□□□ 0.41
PDLIM5-216ENST00000511767 C7orf25Q9BPX7 421 aa17.61■□□□□ 0.41
PDLIM5-216ENST00000511767 TNMDQ9H2S6 317 aa17.61■□□□□ 0.41
PDLIM5-216ENST00000511767 GOLGA2P5Q9HBQ8 144 aa17.61■□□□□ 0.41
PDLIM5-216ENST00000511767 OLFML3Q9NRN5 406 aa17.61■□□□□ 0.41
PDLIM5-216ENST00000511767 SLC38A7Q9NVC3 462 aa17.61■□□□□ 0.41
PDLIM5-216ENST00000511767 USP15Q9Y4E8 981 aaPredicted RBP17.61■□□□□ 0.41
PDLIM5-216ENST00000511767 PCDHB13Q9Y5F0 798 aa17.61■□□□□ 0.41
PDLIM5-216ENST00000511767 LACTBL1A8MY62 500 aa17.6■□□□□ 0.41
PDLIM5-216ENST00000511767 TISP43B9A030 160 aa17.6■□□□□ 0.41
PDLIM5-216ENST00000511767 TMEM189-UBE2V1I3L0A0 370 aa17.6■□□□□ 0.41
PDLIM5-216ENST00000511767 C1RP00736 705 aa17.6■□□□□ 0.41
PDLIM5-216ENST00000511767 CMA1P23946 247 aa17.6■□□□□ 0.41
PDLIM5-216ENST00000511767 ADSSP30520 456 aa17.6■□□□□ 0.41
PDLIM5-216ENST00000511767 ENOX2Q16206 610 aaKnown RBP17.6■□□□□ 0.41
PDLIM5-216ENST00000511767 RTP2Q5QGT7 225 aa17.6■□□□□ 0.41
PDLIM5-216ENST00000511767 SLFN12LQ6IEE8 588 aa17.6■□□□□ 0.41
PDLIM5-216ENST00000511767 LILRA6Q6PI73 481 aa17.6■□□□□ 0.41
PDLIM5-216ENST00000511767 C12orf76Q8N812 135 aaPredicted RBP17.6■□□□□ 0.41
PDLIM5-216ENST00000511767 LNX1Q8TBB1 728 aaPredicted RBP17.6■□□□□ 0.41
PDLIM5-216ENST00000511767 HASPINQ8TF76 798 aa17.6■□□□□ 0.41
PDLIM5-216ENST00000511767 RIN2Q8WYP3 895 aaPredicted RBP17.6■□□□□ 0.41
PDLIM5-216ENST00000511767 HVCN1Q96D96 273 aa17.6■□□□□ 0.41
PDLIM5-216ENST00000511767 APOL5Q9BWW9 433 aa17.6■□□□□ 0.41
PDLIM5-216ENST00000511767 TRIM9Q9C026 710 aa17.6■□□□□ 0.41
PDLIM5-216ENST00000511767 ADAM7Q9H2U9 754 aa17.6■□□□□ 0.41
PDLIM5-216ENST00000511767 FAM13BQ9NYF5 915 aa17.6■□□□□ 0.41
PDLIM5-216ENST00000511767 FNIP2Q9P278 1114 aa17.6■□□□□ 0.41
PDLIM5-216ENST00000511767 CPSF3Q9UKF6 684 aaKnown RBP17.6■□□□□ 0.41
PDLIM5-216ENST00000511767 KCNH3Q9ULD8 1083 aa17.6■□□□□ 0.41
PDLIM5-216ENST00000511767 MUC3AQ02505 3323 aa17.6■□□□□ 0.41
PDLIM5-216ENST00000511767 CXCL8P10145 99 aa17.59■□□□□ 0.41
PDLIM5-216ENST00000511767 FGFR3P22607 806 aa17.59■□□□□ 0.41
PDLIM5-216ENST00000511767 CASP5P51878 434 aa17.59■□□□□ 0.41
PDLIM5-216ENST00000511767 ELAVL2Q12926 359 aaKnown RBP17.59■□□□□ 0.41
PDLIM5-216ENST00000511767 CCDC65Q8IXS2 484 aa17.59■□□□□ 0.41
PDLIM5-216ENST00000511767 C3orf58Q8NDZ4 430 aa17.59■□□□□ 0.41
PDLIM5-216ENST00000511767 KHSRPQ92945 711 aaKnown RBP eCLIP17.59■□□□□ 0.418e-7■■■■□ 20.3
PDLIM5-216ENST00000511767 FBXL18Q96ME1 805 aa17.59■□□□□ 0.41
PDLIM5-216ENST00000511767 ACCSQ96QU6 501 aa17.59■□□□□ 0.41
PDLIM5-216ENST00000511767 TTPALQ9BTX7 342 aa17.59■□□□□ 0.41
PDLIM5-216ENST00000511767 MSTO1Q9BUK6 570 aa17.59■□□□□ 0.41
PDLIM5-216ENST00000511767 FGFBP2Q9BYJ0 223 aa17.59■□□□□ 0.41
PDLIM5-216ENST00000511767 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.59■□□□□ 0.41
PDLIM5-216ENST00000511767 SF3B1O75533 1304 aaKnown RBP eCLIP17.58■□□□□ 0.43e-6■■■■■ 150.5
PDLIM5-216ENST00000511767 MYBP10242 640 aa17.58■□□□□ 0.4
PDLIM5-216ENST00000511767 RPL17P18621 184 aaKnown RBP17.58■□□□□ 0.4
PDLIM5-216ENST00000511767 KRT85P78386 507 aa17.58■□□□□ 0.4
PDLIM5-216ENST00000511767 ITIH3Q06033 890 aa17.58■□□□□ 0.4
PDLIM5-216ENST00000511767 SPAG1Q07617 926 aa17.58■□□□□ 0.4
PDLIM5-216ENST00000511767 POSTNQ15063 836 aa17.58■□□□□ 0.4
PDLIM5-216ENST00000511767 TPRNQ4KMQ1 711 aa17.58■□□□□ 0.4
PDLIM5-216ENST00000511767 L1TD1Q5T7N2 865 aaKnown RBP17.58■□□□□ 0.4
PDLIM5-216ENST00000511767 PRSS55Q6UWB4 352 aaPredicted RBP17.58■□□□□ 0.4
PDLIM5-216ENST00000511767 CRELD2Q6UXH1 353 aaPredicted RBP17.58■□□□□ 0.4
PDLIM5-216ENST00000511767 CEP57Q86XR8 500 aa17.58■□□□□ 0.4
PDLIM5-216ENST00000511767 PALB2Q86YC2 1186 aa17.58■□□□□ 0.4
PDLIM5-216ENST00000511767 SPATA32Q96LK8 384 aa17.58■□□□□ 0.4
PDLIM5-216ENST00000511767 TSPAN18Q96SJ8 248 aa17.58■□□□□ 0.4
PDLIM5-216ENST00000511767 CLSTN3Q9BQT9 956 aa17.58■□□□□ 0.4
PDLIM5-216ENST00000511767 RPF1Q9H9Y2 349 aaKnown RBP17.58■□□□□ 0.4
PDLIM5-216ENST00000511767 DZANK1Q9NVP4 752 aa17.58■□□□□ 0.4
PDLIM5-216ENST00000511767 ATP6V1DQ9Y5K8 247 aa17.58■□□□□ 0.4
PDLIM5-216ENST00000511767 C5orf42Q9H799 3197 aa17.58■□□□□ 0.4
PDLIM5-216ENST00000511767 MYH15Q9Y2K3 1946 aa17.57■□□□□ 0.4
PDLIM5-216ENST00000511767 PODXLO00592 558 aa17.57■□□□□ 0.4
PDLIM5-216ENST00000511767 PRPF6O94906 941 aaKnown RBP17.57■□□□□ 0.4
PDLIM5-216ENST00000511767 GCNT3O95395 438 aa17.57■□□□□ 0.4
PDLIM5-216ENST00000511767 ADH1AP07327 375 aa17.57■□□□□ 0.4
PDLIM5-216ENST00000511767 BRCC3P46736 316 aa17.57■□□□□ 0.4
PDLIM5-216ENST00000511767 ACOT2P49753 483 aa17.57■□□□□ 0.4
PDLIM5-216ENST00000511767 POU5F1Q01860 360 aaKnown RBP17.57■□□□□ 0.4
PDLIM5-216ENST00000511767 CD302Q8IX05 232 aa17.57■□□□□ 0.4
PDLIM5-216ENST00000511767 TMEM130Q8N3G9 435 aa17.57■□□□□ 0.4
PDLIM5-216ENST00000511767 FEZF2Q8TBJ5 459 aa17.57■□□□□ 0.4
PDLIM5-216ENST00000511767 PIK3R5Q8WYR1 880 aa17.57■□□□□ 0.4
PDLIM5-216ENST00000511767 HPS3Q969F9 1004 aa17.57■□□□□ 0.4
PDLIM5-216ENST00000511767 PHF7Q9BWX1 381 aaPredicted RBP17.57■□□□□ 0.4
PDLIM5-216ENST00000511767 EPHX3Q9H6B9 360 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms