RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 CD207Q9UJ71 328 aa7.57□□□□□ -1.2
COPS4-209ENST00000511653 PADI3Q9ULW8 664 aa7.57□□□□□ -1.2
COPS4-209ENST00000511653 BARX2Q9UMQ3 279 aaPredicted RBP7.57□□□□□ -1.2
COPS4-209ENST00000511653 PPT2Q9UMR5 302 aa7.57□□□□□ -1.2
COPS4-209ENST00000511653 POLR3KQ9Y2Y1 108 aaPredicted RBP7.57□□□□□ -1.2
COPS4-209ENST00000511653 SPTBN2O15020 2390 aa7.57□□□□□ -1.2
COPS4-209ENST00000511653 PLXNA3P51805 1871 aa7.57□□□□□ -1.2
COPS4-209ENST00000511653 IGSF9BQ9UPX0 1349 aa7.57□□□□□ -1.2
COPS4-209ENST00000511653 STXBP3O00186 592 aa7.57□□□□□ -1.2
COPS4-209ENST00000511653 NCK2O43639 380 aa7.57□□□□□ -1.2
COPS4-209ENST00000511653 MGEA5O60502 916 aa7.57□□□□□ -1.2
COPS4-209ENST00000511653 ATP2B1P20020 1258 aa7.57□□□□□ -1.2
COPS4-209ENST00000511653 KIF5BP33176 963 aa7.57□□□□□ -1.2
COPS4-209ENST00000511653 NRIP1P48552 1158 aa7.57□□□□□ -1.2
COPS4-209ENST00000511653 ITGB3BPQ13352 177 aaPredicted RBP7.57□□□□□ -1.2
COPS4-209ENST00000511653 AP3B2Q13367 1082 aa7.57□□□□□ -1.2
COPS4-209ENST00000511653 TMTC3Q6ZXV5 915 aa7.57□□□□□ -1.2
COPS4-209ENST00000511653 RBM23Q86U06 439 aaKnown RBP7.57□□□□□ -1.2
COPS4-209ENST00000511653 CMTR2Q8IYT2 770 aaKnown RBP7.57□□□□□ -1.2
COPS4-209ENST00000511653 SMRP1Q8NCR6 262 aa7.57□□□□□ -1.2
COPS4-209ENST00000511653 VN1R2Q8NFZ6 395 aa7.57□□□□□ -1.2
COPS4-209ENST00000511653 POF1BQ8WVV4 589 aa7.57□□□□□ -1.2
COPS4-209ENST00000511653 RUFY2Q8WXA3 655 aa7.57□□□□□ -1.2
COPS4-209ENST00000511653 P2RX5Q93086 422 aa7.57□□□□□ -1.2
COPS4-209ENST00000511653 CDHR1Q96JP9 859 aa7.57□□□□□ -1.2
COPS4-209ENST00000511653 PLVAPQ9BX97 442 aa7.57□□□□□ -1.2
COPS4-209ENST00000511653 BRMS1Q9HCU9 246 aa7.57□□□□□ -1.2
COPS4-209ENST00000511653 KCNH7Q9NS40 1196 aa7.57□□□□□ -1.2
COPS4-209ENST00000511653 PCDHA6Q9UN73 950 aa7.57□□□□□ -1.2
COPS4-209ENST00000511653 SAMM50Q9Y512 469 aa7.57□□□□□ -1.2
COPS4-209ENST00000511653 PCDHA8Q9Y5H6 950 aa7.57□□□□□ -1.2
COPS4-209ENST00000511653 TRPV2Q9Y5S1 764 aa7.57□□□□□ -1.2
COPS4-209ENST00000511653 NCOR2Q9Y618 2525 aa7.56□□□□□ -1.2
COPS4-209ENST00000511653 CNTNAP5Q8WYK1 1306 aa7.56□□□□□ -1.2
COPS4-209ENST00000511653 A0A0A0MRY4 1105 aa7.56□□□□□ -1.2
COPS4-209ENST00000511653 SPDYE3A6NKU9 549 aa7.56□□□□□ -1.2
COPS4-209ENST00000511653 EYA4O95677 639 aa7.56□□□□□ -1.2
COPS4-209ENST00000511653 ARP10275 920 aa7.56□□□□□ -1.2
COPS4-209ENST00000511653 SCG2P13521 617 aa7.56□□□□□ -1.2
COPS4-209ENST00000511653 SMARCA1P28370 1054 aa7.56□□□□□ -1.2
COPS4-209ENST00000511653 SOX9P48436 509 aa7.56□□□□□ -1.2
COPS4-209ENST00000511653 ACTR2P61160 394 aa7.56□□□□□ -1.2
COPS4-209ENST00000511653 CLCQ05315 142 aa7.56□□□□□ -1.2
COPS4-209ENST00000511653 SUZ12Q15022 739 aaKnown RBP7.56□□□□□ -1.2
COPS4-209ENST00000511653 LRRC14Q15048 493 aa7.56□□□□□ -1.2
COPS4-209ENST00000511653 WWC2Q6AWC2 1192 aa7.56□□□□□ -1.2
COPS4-209ENST00000511653 CASC1Q6TDU7 716 aa7.56□□□□□ -1.2
COPS4-209ENST00000511653 NFXL1Q6ZNB6 911 aa7.56□□□□□ -1.2
COPS4-209ENST00000511653 HEATR3Q7Z4Q2 680 aa7.56□□□□□ -1.2
COPS4-209ENST00000511653 MICU3Q86XE3 530 aa7.56□□□□□ -1.2
COPS4-209ENST00000511653 EFHBQ8N7U6 833 aa7.56□□□□□ -1.2
COPS4-209ENST00000511653 PRSS33Q8NF86 280 aa7.56□□□□□ -1.2
COPS4-209ENST00000511653 TMEM40Q8WWA1 233 aa7.56□□□□□ -1.2
COPS4-209ENST00000511653 UBXN4Q92575 508 aa7.56□□□□□ -1.2
COPS4-209ENST00000511653 LZTS2Q9BRK4 669 aa7.56□□□□□ -1.2
COPS4-209ENST00000511653 EMILIN2Q9BXX0 1053 aa7.56□□□□□ -1.2
COPS4-209ENST00000511653 LRRC3Q9BY71 257 aa7.56□□□□□ -1.2
COPS4-209ENST00000511653 UPF3BQ9BZI7 483 aaKnown RBP7.56□□□□□ -1.2
COPS4-209ENST00000511653 LSG1Q9H089 658 aaKnown RBP7.56□□□□□ -1.2
COPS4-209ENST00000511653 SLC9A2Q9UBY0 812 aa7.56□□□□□ -1.2
COPS4-209ENST00000511653 PCDHA2Q9Y5H9 948 aa7.56□□□□□ -1.2
COPS4-209ENST00000511653 EPG5Q9HCE0 2579 aa7.56□□□□□ -1.2
COPS4-209ENST00000511653 KDM3AQ9Y4C1 1321 aa7.55□□□□□ -1.2
COPS4-209ENST00000511653 CCDC69A6NI79 296 aa7.55□□□□□ -1.2
COPS4-209ENST00000511653 RRN3P2A6NIE6 340 aa7.55□□□□□ -1.2
COPS4-209ENST00000511653 LOC730098B7Z3J9 87 aa7.55□□□□□ -1.2
COPS4-209ENST00000511653 SLC27A2O14975 620 aa7.55□□□□□ -1.2
COPS4-209ENST00000511653 PER2O15055 1255 aa7.55□□□□□ -1.2
COPS4-209ENST00000511653 CCNE2O96020 404 aa7.55□□□□□ -1.2
COPS4-209ENST00000511653 MCM5P33992 734 aa7.55□□□□□ -1.2
COPS4-209ENST00000511653 ETFBP38117 255 aa7.55□□□□□ -1.2
COPS4-209ENST00000511653 ARL4DP49703 201 aa7.55□□□□□ -1.2
COPS4-209ENST00000511653 GNAQP50148 359 aa7.55□□□□□ -1.2
COPS4-209ENST00000511653 LRFN4Q6PJG9 635 aa7.55□□□□□ -1.2
COPS4-209ENST00000511653 CCDC60Q8IWA6 550 aaPredicted RBP7.55□□□□□ -1.2
COPS4-209ENST00000511653 EDAQ92838 391 aa7.55□□□□□ -1.2
COPS4-209ENST00000511653 PPP1R16BQ96T49 567 aa7.55□□□□□ -1.2
COPS4-209ENST00000511653 CORO1BQ9BR76 489 aa7.55□□□□□ -1.2
COPS4-209ENST00000511653 MXRA8Q9BRK3 442 aa7.55□□□□□ -1.2
COPS4-209ENST00000511653 FTHL17Q9BXU8 183 aa7.55□□□□□ -1.2
COPS4-209ENST00000511653 CELF4Q9BZC1 486 aaKnown RBP7.55□□□□□ -1.2
COPS4-209ENST00000511653 ERVK-5Q9HDB9 667 aa7.55□□□□□ -1.2
COPS4-209ENST00000511653 PCDHA4Q9UN74 947 aa7.55□□□□□ -1.2
COPS4-209ENST00000511653 GINS2Q9Y248 185 aa7.55□□□□□ -1.2
COPS4-209ENST00000511653 NOC2LQ9Y3T9 749 aaKnown RBP7.55□□□□□ -1.2
COPS4-209ENST00000511653 USP15Q9Y4E8 981 aaPredicted RBP7.55□□□□□ -1.2
COPS4-209ENST00000511653 SQORQ9Y6N5 450 aa7.55□□□□□ -1.2
COPS4-209ENST00000511653 DENND4AQ7Z401 1863 aa7.55□□□□□ -1.2
COPS4-209ENST00000511653 NFASCO94856 1347 aa7.54□□□□□ -1.2
COPS4-209ENST00000511653 SMIM35A0A1B0GVV1 85 aa7.54□□□□□ -1.2
COPS4-209ENST00000511653 TMEM221A6NGB7 291 aa7.54□□□□□ -1.2
COPS4-209ENST00000511653 M0R296 226 aa7.54□□□□□ -1.2
COPS4-209ENST00000511653 DDX39AO00148 427 aaKnown RBP7.54□□□□□ -1.2
COPS4-209ENST00000511653 ADAMTS3O15072 1205 aa7.54□□□□□ -1.2
COPS4-209ENST00000511653 CYP11A1P05108 521 aa7.54□□□□□ -1.2
COPS4-209ENST00000511653 CD68P34810 354 aaPredicted RBP7.54□□□□□ -1.2
COPS4-209ENST00000511653 LIFRP42702 1097 aa7.54□□□□□ -1.2
COPS4-209ENST00000511653 SARSP49591 514 aaKnown RBP7.54□□□□□ -1.2
COPS4-209ENST00000511653 STAT5BP51692 787 aa7.54□□□□□ -1.2
COPS4-209ENST00000511653 ERVFC1P60507 584 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms