RNA–Protein interactions for RNA: ENST00000511316.1

HMGB2-205, Transcript of high mobility group box 2, humanhuman

TSL 2

Gene HMGB2, Length 1,841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-205ENST00000511316 CCDC114Q96M63 670 aa13.81□□□□□ -0.2
HMGB2-205ENST00000511316 FAM20AQ96MK3 541 aa13.81□□□□□ -0.2
HMGB2-205ENST00000511316 C16orf70Q9BSU1 422 aa13.81□□□□□ -0.2
HMGB2-205ENST00000511316 NSRP1Q9H0G5 558 aaKnown RBP13.81□□□□□ -0.2
HMGB2-205ENST00000511316 DNM3Q9UQ16 869 aa13.81□□□□□ -0.2
HMGB2-205ENST00000511316 MYH7BA7E2Y1 1941 aa13.81□□□□□ -0.2
HMGB2-205ENST00000511316 MIF4GDA9UHW6 222 aaKnown RBP13.8□□□□□ -0.2
HMGB2-205ENST00000511316 ANKRD65E5RJM6 399 aa13.8□□□□□ -0.2
HMGB2-205ENST00000511316 HAS3O00219 553 aa13.8□□□□□ -0.2
HMGB2-205ENST00000511316 EIF3DO15371 548 aaKnown RBP eCLIP13.8□□□□□ -0.22e-24■□□□□ 10
HMGB2-205ENST00000511316 DHX15O43143 795 aaKnown RBP13.8□□□□□ -0.2
HMGB2-205ENST00000511316 CABYRO75952 493 aa13.8□□□□□ -0.2
HMGB2-205ENST00000511316 TMEM253P0C7T8 217 aa13.8□□□□□ -0.2
HMGB2-205ENST00000511316 SYN1P17600 705 aa13.8□□□□□ -0.2
HMGB2-205ENST00000511316 CYP11B2P19099 503 aa13.8□□□□□ -0.2
HMGB2-205ENST00000511316 ITGA7Q13683 1181 aa13.8□□□□□ -0.2
HMGB2-205ENST00000511316 SKIDA1Q1XH10 827 aa13.8□□□□□ -0.2
HMGB2-205ENST00000511316 METTL7BQ6UX53 244 aa13.8□□□□□ -0.2
HMGB2-205ENST00000511316 CYFIP1Q7L576 1253 aa13.8□□□□□ -0.2
HMGB2-205ENST00000511316 TMC3Q7Z5M5 1100 aa13.8□□□□□ -0.2
HMGB2-205ENST00000511316 DHX37Q8IY37 1157 aaKnown RBP13.8□□□□□ -0.2
HMGB2-205ENST00000511316 CCDC13Q8IYE1 715 aa13.8□□□□□ -0.2
HMGB2-205ENST00000511316 RFFLQ8WZ73 363 aa13.8□□□□□ -0.2
HMGB2-205ENST00000511316 HAS1Q92839 578 aa13.8□□□□□ -0.2
HMGB2-205ENST00000511316 PGM2Q96G03 612 aa13.8□□□□□ -0.2
HMGB2-205ENST00000511316 PLCD4Q9BRC7 762 aa13.8□□□□□ -0.2
HMGB2-205ENST00000511316 KCNMB3Q9NPA1 279 aa13.8□□□□□ -0.2
HMGB2-205ENST00000511316 PDLIM7Q9NR12 457 aa13.8□□□□□ -0.2
HMGB2-205ENST00000511316 SMARCAL1Q9NZC9 954 aa13.8□□□□□ -0.2
HMGB2-205ENST00000511316 EHD2Q9NZN4 543 aa13.8□□□□□ -0.2
HMGB2-205ENST00000511316 CDH23Q9H251 3354 aa13.8□□□□□ -0.2
HMGB2-205ENST00000511316 ESYT3A0FGR9 886 aa13.8□□□□□ -0.2
HMGB2-205ENST00000511316 MAFGO15525 162 aa13.8□□□□□ -0.2
HMGB2-205ENST00000511316 MUTP22033 750 aa13.8□□□□□ -0.2
HMGB2-205ENST00000511316 ECHS1P30084 290 aa13.8□□□□□ -0.2
HMGB2-205ENST00000511316 HADHBP55084 474 aaKnown RBP13.8□□□□□ -0.2
HMGB2-205ENST00000511316 JAM2P57087 298 aa13.8□□□□□ -0.2
HMGB2-205ENST00000511316 IFT88Q13099 833 aa13.8□□□□□ -0.2
HMGB2-205ENST00000511316 HIC1Q14526 733 aa13.8□□□□□ -0.2
HMGB2-205ENST00000511316 ITIH4Q14624 930 aa13.8□□□□□ -0.2
HMGB2-205ENST00000511316 TCEAL1Q15170 157 aa13.8□□□□□ -0.2
HMGB2-205ENST00000511316 SNCBQ16143 134 aa13.8□□□□□ -0.2
HMGB2-205ENST00000511316 GNPTABQ3T906 1256 aa13.8□□□□□ -0.2
HMGB2-205ENST00000511316 FBXW10Q5XX13 1052 aa13.8□□□□□ -0.2
HMGB2-205ENST00000511316 RHOT2Q8IXI1 618 aa13.8□□□□□ -0.2
HMGB2-205ENST00000511316 UBLCP1Q8WVY7 318 aaPredicted RBP13.8□□□□□ -0.2
HMGB2-205ENST00000511316 SGSM3Q96HU1 749 aa13.8□□□□□ -0.2
HMGB2-205ENST00000511316 FMO2Q99518 471 aa13.8□□□□□ -0.2
HMGB2-205ENST00000511316 GPR20Q99678 358 aa13.8□□□□□ -0.2
HMGB2-205ENST00000511316 GDF15Q99988 308 aa13.8□□□□□ -0.2
HMGB2-205ENST00000511316 TMEM109Q9BVC6 243 aa13.8□□□□□ -0.2
HMGB2-205ENST00000511316 ZMYND8Q9ULU4 1186 aaPredicted RBP13.8□□□□□ -0.2
HMGB2-205ENST00000511316 KIAA1024Q9UPX6 916 aa13.8□□□□□ -0.2
HMGB2-205ENST00000511316 ATP11BQ9Y2G3 1177 aa13.8□□□□□ -0.2
HMGB2-205ENST00000511316 STXBP5LQ9Y2K9 1186 aa13.8□□□□□ -0.2
HMGB2-205ENST00000511316 GSTTP1A0A1W2PQM5 241 aa13.79□□□□□ -0.2
HMGB2-205ENST00000511316 PODXLO00592 558 aa13.79□□□□□ -0.2
HMGB2-205ENST00000511316 ASAP2O43150 1006 aa13.79□□□□□ -0.2
HMGB2-205ENST00000511316 DNAJC8O75937 253 aaPredicted RBP13.79□□□□□ -0.2
HMGB2-205ENST00000511316 SSBP05455 408 aaKnown RBP eCLIP13.79□□□□□ -0.2
HMGB2-205ENST00000511316 EZRP15311 586 aaKnown RBP13.79□□□□□ -0.2
HMGB2-205ENST00000511316 PON1P27169 355 aa13.79□□□□□ -0.2
HMGB2-205ENST00000511316 RPA1P27694 616 aa13.79□□□□□ -0.2
HMGB2-205ENST00000511316 PTENP60484 403 aa13.79□□□□□ -0.2
HMGB2-205ENST00000511316 MTMR1Q13613 665 aa13.79□□□□□ -0.2
HMGB2-205ENST00000511316 SLMAPQ14BN4 828 aa13.79□□□□□ -0.2
HMGB2-205ENST00000511316 NBPF20Q3BBV1 942 aa13.79□□□□□ -0.2
HMGB2-205ENST00000511316 EPM2AIP1Q7L775 607 aaPredicted RBP13.79□□□□□ -0.2
HMGB2-205ENST00000511316 ZNF571Q7Z3V5 609 aaPredicted RBP13.79□□□□□ -0.2
HMGB2-205ENST00000511316 METTL13Q8N6R0 699 aa13.79□□□□□ -0.2
HMGB2-205ENST00000511316 SYT2Q8N9I0 419 aaPredicted RBP13.79□□□□□ -0.2
HMGB2-205ENST00000511316 GIMAP7Q8NHV1 300 aa13.79□□□□□ -0.2
HMGB2-205ENST00000511316 CCHCR1Q8TD31 782 aa13.79□□□□□ -0.2
HMGB2-205ENST00000511316 CTNNBL1Q8WYA6 563 aaPredicted RBP13.79□□□□□ -0.2
HMGB2-205ENST00000511316 TATDN2Q93075 761 aa13.79□□□□□ -0.2
HMGB2-205ENST00000511316 SPATA33Q96N06 139 aa13.79□□□□□ -0.2
HMGB2-205ENST00000511316 OLFML3Q9NRN5 406 aa13.79□□□□□ -0.2
HMGB2-205ENST00000511316 SEL1LQ9UBV2 794 aa13.79□□□□□ -0.2
HMGB2-205ENST00000511316 TBX21Q9UL17 535 aa13.79□□□□□ -0.2
HMGB2-205ENST00000511316 NR2E3Q9Y5X4 410 aa13.79□□□□□ -0.2
HMGB2-205ENST00000511316 CFAP73A6NFT4 308 aa13.78□□□□□ -0.2
HMGB2-205ENST00000511316 TBCAO75347 108 aaKnown RBP13.78□□□□□ -0.2
HMGB2-205ENST00000511316 F2P00734 622 aa13.78□□□□□ -0.2
HMGB2-205ENST00000511316 HPDP32754 393 aaPredicted RBP13.78□□□□□ -0.2
HMGB2-205ENST00000511316 SLC12A3P55017 1021 aa13.78□□□□□ -0.2
HMGB2-205ENST00000511316 ADCY2Q08462 1091 aa13.78□□□□□ -0.2
HMGB2-205ENST00000511316 MYBPC2Q14324 1141 aa13.78□□□□□ -0.2
HMGB2-205ENST00000511316 EPHA7Q15375 998 aa13.78□□□□□ -0.2
HMGB2-205ENST00000511316 DGKDQ16760 1214 aa13.78□□□□□ -0.2
HMGB2-205ENST00000511316 KRT71Q3SY84 523 aa13.78□□□□□ -0.2
HMGB2-205ENST00000511316 PREPLQ4J6C6 727 aaPredicted RBP13.78□□□□□ -0.2
HMGB2-205ENST00000511316 TTC19Q6DKK2 380 aaPredicted RBP13.78□□□□□ -0.2
HMGB2-205ENST00000511316 NIPA1Q7RTP0 329 aa13.78□□□□□ -0.2
HMGB2-205ENST00000511316 KCNK18Q7Z418 384 aa13.78□□□□□ -0.2
HMGB2-205ENST00000511316 CPLX4Q7Z7G2 160 aa13.78□□□□□ -0.2
HMGB2-205ENST00000511316 DAAM2Q86T65 1068 aa13.78□□□□□ -0.2
HMGB2-205ENST00000511316 NLRX1Q86UT6 975 aa13.78□□□□□ -0.2
HMGB2-205ENST00000511316 NT5DC3Q86UY8 548 aa13.78□□□□□ -0.2
HMGB2-205ENST00000511316 TLCD1Q96CP7 247 aa13.78□□□□□ -0.2
HMGB2-205ENST00000511316 VWCEQ96DN2 955 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms