RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 PTENP60484 403 aa9.54□□□□□ -0.88
PDPN-209ENST00000510906 UBE3AQ05086 875 aa9.54□□□□□ -0.88
PDPN-209ENST00000510906 ADAM15Q13444 863 aa9.54□□□□□ -0.88
PDPN-209ENST00000510906 CAPSQ13938 189 aa9.54□□□□□ -0.88
PDPN-209ENST00000510906 MXD4Q14582 209 aaPredicted RBP9.54□□□□□ -0.88
PDPN-209ENST00000510906 ENOX2Q16206 610 aaKnown RBP9.54□□□□□ -0.88
PDPN-209ENST00000510906 MAEAQ7L5Y9 396 aa9.54□□□□□ -0.88
PDPN-209ENST00000510906 C4orf32Q8N8J7 132 aa9.54□□□□□ -0.88
PDPN-209ENST00000510906 MICAL1Q8TDZ2 1067 aa9.54□□□□□ -0.88
PDPN-209ENST00000510906 MRPS27Q92552 414 aaKnown RBP9.54□□□□□ -0.88
PDPN-209ENST00000510906 PPP2R3CQ969Q6 453 aa9.54□□□□□ -0.88
PDPN-209ENST00000510906 TBC1D32Q96NH3 1257 aa9.54□□□□□ -0.88
PDPN-209ENST00000510906 POLR3CQ9BUI4 534 aaPredicted RBP9.54□□□□□ -0.88
PDPN-209ENST00000510906 POLR3FQ9H1D9 316 aaPredicted RBP9.54□□□□□ -0.88
PDPN-209ENST00000510906 TUFT1Q9NNX1 390 aa9.54□□□□□ -0.88
PDPN-209ENST00000510906 GPRC5CQ9NQ84 441 aa9.54□□□□□ -0.88
PDPN-209ENST00000510906 TLR9Q9NR96 1032 aa9.54□□□□□ -0.88
PDPN-209ENST00000510906 NOL7Q9UMY1 257 aaKnown RBP9.54□□□□□ -0.88
PDPN-209ENST00000510906 INPP5FQ9Y2H2 1132 aa9.54□□□□□ -0.88
PDPN-209ENST00000510906 DYRK1BQ9Y463 629 aa9.54□□□□□ -0.88
PDPN-209ENST00000510906 PCDHB6Q9Y5E3 794 aa9.54□□□□□ -0.88
PDPN-209ENST00000510906 PCDHB2Q9Y5E7 798 aa9.54□□□□□ -0.88
PDPN-209ENST00000510906 REV3LO60673 3130 aa9.54□□□□□ -0.88
PDPN-209ENST00000510906 CHD8Q9HCK8 2581 aa9.54□□□□□ -0.88
PDPN-209ENST00000510906 NT5C1B-RDH14C9J2C7 533 aa9.53□□□□□ -0.88
PDPN-209ENST00000510906 INO80B-WBP1J3KQ70 363 aa9.53□□□□□ -0.88
PDPN-209ENST00000510906 FSCN2O14926 492 aa9.53□□□□□ -0.88
PDPN-209ENST00000510906 PER2O15055 1255 aa9.53□□□□□ -0.88
PDPN-209ENST00000510906 B4GALT3O60512 393 aa9.53□□□□□ -0.88
PDPN-209ENST00000510906 TSPAN1O60635 241 aa9.53□□□□□ -0.88
PDPN-209ENST00000510906 ZNF623O75123 536 aa9.53□□□□□ -0.88
PDPN-209ENST00000510906 PRPF40AO75400 957 aaKnown RBP9.53□□□□□ -0.88
PDPN-209ENST00000510906 OFD1O75665 1012 aa9.53□□□□□ -0.88
PDPN-209ENST00000510906 GLP2RO95838 553 aa9.53□□□□□ -0.88
PDPN-209ENST00000510906 XRCC6P12956 609 aaKnown RBP eCLIP9.53□□□□□ -0.88
PDPN-209ENST00000510906 PCSK2P16519 638 aa9.53□□□□□ -0.88
PDPN-209ENST00000510906 RPA1P27694 616 aa9.53□□□□□ -0.88
PDPN-209ENST00000510906 NDUFV1P49821 464 aa9.53□□□□□ -0.88
PDPN-209ENST00000510906 RAB27AP51159 221 aa9.53□□□□□ -0.88
PDPN-209ENST00000510906 ARSDP51689 593 aa9.53□□□□□ -0.88
PDPN-209ENST00000510906 AFF1P51825 1210 aaKnown RBP9.53□□□□□ -0.88
PDPN-209ENST00000510906 BCAR1P56945 870 aa9.53□□□□□ -0.88
PDPN-209ENST00000510906 RBM10P98175 930 aaKnown RBP9.53□□□□□ -0.88
PDPN-209ENST00000510906 MBTD1Q05BQ5 628 aa9.53□□□□□ -0.88
PDPN-209ENST00000510906 TFDP1Q14186 410 aa9.53□□□□□ -0.88
PDPN-209ENST00000510906 PKDCCQ504Y2 493 aa9.53□□□□□ -0.88
PDPN-209ENST00000510906 NOMO2Q5JPE7 1267 aa9.53□□□□□ -0.88
PDPN-209ENST00000510906 PLPP4Q5VZY2 271 aa9.53□□□□□ -0.88
PDPN-209ENST00000510906 GLB1LQ6UWU2 654 aa9.53□□□□□ -0.88
PDPN-209ENST00000510906 AGMOQ6ZNB7 445 aa9.53□□□□□ -0.88
PDPN-209ENST00000510906 FAM178BQ8IXR5 827 aa9.53□□□□□ -0.88
PDPN-209ENST00000510906 SLC39A11Q8N1S5 342 aa9.53□□□□□ -0.88
PDPN-209ENST00000510906 EFHBQ8N7U6 833 aa9.53□□□□□ -0.88
PDPN-209ENST00000510906 ERMNQ8TAM6 284 aa9.53□□□□□ -0.88
PDPN-209ENST00000510906 CPB2Q96IY4 423 aa9.53□□□□□ -0.88
PDPN-209ENST00000510906 NACC1Q96RE7 527 aa9.53□□□□□ -0.88
PDPN-209ENST00000510906 TCF25Q9BQ70 676 aa9.53□□□□□ -0.88
PDPN-209ENST00000510906 MRPL9Q9BYD2 267 aaKnown RBP9.53□□□□□ -0.88
PDPN-209ENST00000510906 TBC1D13Q9NVG8 400 aa9.53□□□□□ -0.88
PDPN-209ENST00000510906 SPG21Q9NZD8 308 aa9.53□□□□□ -0.88
PDPN-209ENST00000510906 DBR1Q9UK59 544 aaKnown RBP9.53□□□□□ -0.88
PDPN-209ENST00000510906 LZTS1Q9Y250 596 aa9.53□□□□□ -0.88
PDPN-209ENST00000510906 KIAA1671Q9BY89 1806 aa9.53□□□□□ -0.88
PDPN-209ENST00000510906 A0A1W2PNR3 127 aa9.52□□□□□ -0.89
PDPN-209ENST00000510906 HIDE1A8MVS5 230 aa9.52□□□□□ -0.89
PDPN-209ENST00000510906 AXIN1O15169 862 aa9.52□□□□□ -0.89
PDPN-209ENST00000510906 B4GALT5O43286 388 aa9.52□□□□□ -0.89
PDPN-209ENST00000510906 ZC3H11AO75152 810 aaKnown RBP eCLIP9.52□□□□□ -0.89
PDPN-209ENST00000510906 ERLIN2O94905 339 aa9.52□□□□□ -0.89
PDPN-209ENST00000510906 GJB2P29033 226 aa9.52□□□□□ -0.89
PDPN-209ENST00000510906 PPM1AP35813 382 aa9.52□□□□□ -0.89
PDPN-209ENST00000510906 KRT17Q04695 432 aa9.52□□□□□ -0.89
PDPN-209ENST00000510906 POU5F1BQ06416 359 aa9.52□□□□□ -0.89
PDPN-209ENST00000510906 TYRO3Q06418 890 aa9.52□□□□□ -0.89
PDPN-209ENST00000510906 MRPL58Q14197 206 aaKnown RBP9.52□□□□□ -0.89
PDPN-209ENST00000510906 FNDC1Q4ZHG4 1894 aaPredicted RBP9.52□□□□□ -0.89
PDPN-209ENST00000510906 MCTP1Q6DN14 999 aa9.52□□□□□ -0.89
PDPN-209ENST00000510906 MRPL10Q7Z7H8 261 aaKnown RBP9.52□□□□□ -0.89
PDPN-209ENST00000510906 TMEM173Q86WV6 379 aaPredicted RBP9.52□□□□□ -0.89
PDPN-209ENST00000510906 ZNF280BQ86YH2 543 aa9.52□□□□□ -0.89
PDPN-209ENST00000510906 SMG8Q8ND04 991 aaKnown RBP9.52□□□□□ -0.89
PDPN-209ENST00000510906 VN1R2Q8NFZ6 395 aa9.52□□□□□ -0.89
PDPN-209ENST00000510906 BCL7CQ8WUZ0 217 aaPredicted RBP9.52□□□□□ -0.89
PDPN-209ENST00000510906 PIK3R5Q8WYR1 880 aa9.52□□□□□ -0.89
PDPN-209ENST00000510906 PGBD4Q96DM1 585 aa9.52□□□□□ -0.89
PDPN-209ENST00000510906 MSLNLQ96KJ4 702 aa9.52□□□□□ -0.89
PDPN-209ENST00000510906 EIF2AQ9BY44 585 aaKnown RBP9.52□□□□□ -0.89
PDPN-209ENST00000510906 NIF3L1Q9GZT8 377 aa9.52□□□□□ -0.89
PDPN-209ENST00000510906 GBP3Q9H0R5 595 aa9.52□□□□□ -0.89
PDPN-209ENST00000510906 NRDE2Q9H7Z3 1164 aa9.52□□□□□ -0.89
PDPN-209ENST00000510906 TLE6Q9H808 572 aa9.52□□□□□ -0.89
PDPN-209ENST00000510906 ENTPD7Q9NQZ7 604 aa9.52□□□□□ -0.89
PDPN-209ENST00000510906 CLEC1BQ9P126 229 aa9.52□□□□□ -0.89
PDPN-209ENST00000510906 UNC79Q9P2D8 2635 aa9.52□□□□□ -0.89
PDPN-209ENST00000510906 DNAJB4Q9UDY4 337 aa9.52□□□□□ -0.89
PDPN-209ENST00000510906 LRWD1Q9UFC0 647 aa9.52□□□□□ -0.89
PDPN-209ENST00000510906 PUF60Q9UHX1 559 aaKnown RBP9.52□□□□□ -0.89
PDPN-209ENST00000510906 CD207Q9UJ71 328 aa9.52□□□□□ -0.89
PDPN-209ENST00000510906 BARX2Q9UMQ3 279 aaPredicted RBP9.52□□□□□ -0.89
PDPN-209ENST00000510906 KIF3AQ9Y496 699 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms