RNA–Protein interactions for RNA: ENST00000510877.5

LIN54-210, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 4,507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-210ENST00000510877 KLHDC9Q8NEP7 349 aa13.38□□□□□ -0.27
LIN54-210ENST00000510877 CTNND2Q9UQB3 1225 aa13.38□□□□□ -0.27
LIN54-210ENST00000510877 RPN1P04843 607 aaKnown RBP13.37□□□□□ -0.27
LIN54-210ENST00000510877 PTGS1P23219 599 aa13.37□□□□□ -0.27
LIN54-210ENST00000510877 PAK1Q13153 545 aa13.37□□□□□ -0.27
LIN54-210ENST00000510877 TIMM13Q9Y5L4 95 aaPredicted RBP13.37□□□□□ -0.27
LIN54-210ENST00000510877 ADGRA3Q8IWK6 1321 aa13.37□□□□□ -0.27
LIN54-210ENST00000510877 RFXAPO00287 272 aa13.37□□□□□ -0.27
LIN54-210ENST00000510877 PODXLO00592 558 aa13.37□□□□□ -0.27
LIN54-210ENST00000510877 POLR2BP30876 1174 aaKnown RBP13.37□□□□□ -0.27
LIN54-210ENST00000510877 PDE6CP51160 858 aa13.37□□□□□ -0.27
LIN54-210ENST00000510877 ZSCAN23Q3MJ62 389 aa13.37□□□□□ -0.27
LIN54-210ENST00000510877 CRISPLD2Q9H0B8 497 aa13.37□□□□□ -0.27
LIN54-210ENST00000510877 TMEM60Q9H2L4 133 aa13.37□□□□□ -0.27
LIN54-210ENST00000510877 PCDHB5Q9Y5E4 795 aa13.37□□□□□ -0.27
LIN54-210ENST00000510877 NEMP1O14524 444 aa13.37□□□□□ -0.27
LIN54-210ENST00000510877 ADORA2BP29275 332 aa13.37□□□□□ -0.27
LIN54-210ENST00000510877 PREPLQ4J6C6 727 aaPredicted RBP13.37□□□□□ -0.27
LIN54-210ENST00000510877 PABPC1LQ4VXU2 614 aaKnown RBP13.37□□□□□ -0.27
LIN54-210ENST00000510877 SEZ6Q53EL9 994 aa13.37□□□□□ -0.27
LIN54-210ENST00000510877 TMCO2Q7Z6W1 182 aaPredicted RBP13.37□□□□□ -0.27
LIN54-210ENST00000510877 ECHDC2Q86YB7 292 aa13.37□□□□□ -0.27
LIN54-210ENST00000510877 CMTR2Q8IYT2 770 aaKnown RBP13.37□□□□□ -0.27
LIN54-210ENST00000510877 NCDNQ9UBB6 729 aa13.37□□□□□ -0.27
LIN54-210ENST00000510877 SLU7O95391 586 aaKnown RBP13.36□□□□□ -0.27
LIN54-210ENST00000510877 COL6A1P12109 1028 aa13.36□□□□□ -0.27
LIN54-210ENST00000510877 CTGFP29279 349 aa13.36□□□□□ -0.27
LIN54-210ENST00000510877 GJC1P36383 396 aa13.36□□□□□ -0.27
LIN54-210ENST00000510877 SFSWAPQ12872 951 aaKnown RBP13.36□□□□□ -0.27
LIN54-210ENST00000510877 CCDC62Q6P9F0 684 aa13.36□□□□□ -0.27
LIN54-210ENST00000510877 ADAT2Q7Z6V5 191 aaKnown RBP13.36□□□□□ -0.27
LIN54-210ENST00000510877 DDX53Q86TM3 631 aaKnown RBP13.36□□□□□ -0.27
LIN54-210ENST00000510877 PPP1R9BQ96SB3 815 aa13.36□□□□□ -0.27
LIN54-210ENST00000510877 UPF3AQ9H1J1 476 aaKnown RBP13.36□□□□□ -0.27
LIN54-210ENST00000510877 DPP3Q9NY33 737 aa13.36□□□□□ -0.27
LIN54-210ENST00000510877 TAF1P21675 1872 aa13.36□□□□□ -0.27
LIN54-210ENST00000510877 PI4K2BG5E9Z4 385 aa13.36□□□□□ -0.27
LIN54-210ENST00000510877 SPA17Q15506 151 aa13.36□□□□□ -0.27
LIN54-210ENST00000510877 INTS8Q75QN2 995 aaKnown RBP13.36□□□□□ -0.27
LIN54-210ENST00000510877 CPLX3Q8WVH0 158 aa13.36□□□□□ -0.27
LIN54-210ENST00000510877 CDX2Q99626 313 aaPredicted RBP13.36□□□□□ -0.27
LIN54-210ENST00000510877 DDX50Q9BQ39 737 aaKnown RBP13.36□□□□□ -0.27
LIN54-210ENST00000510877 UXTQ9UBK9 157 aaPredicted RBP13.36□□□□□ -0.27
LIN54-210ENST00000510877 SHANK3Q9BYB0 1731 aa13.36□□□□□ -0.27
LIN54-210ENST00000510877 MBL2P11226 248 aaPredicted RBP13.36□□□□□ -0.27
LIN54-210ENST00000510877 PBX3P40426 434 aa13.36□□□□□ -0.27
LIN54-210ENST00000510877 FAM43BQ6ZT52 329 aaPredicted RBP13.36□□□□□ -0.27
LIN54-210ENST00000510877 KREMEN2Q8NCW0 462 aa13.36□□□□□ -0.27
LIN54-210ENST00000510877 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.36□□□□□ -0.27
LIN54-210ENST00000510877 ZBTB10Q96DT7 871 aa13.36□□□□□ -0.27
LIN54-210ENST00000510877 DYRK4Q9NR20 520 aa13.36□□□□□ -0.27
LIN54-210ENST00000510877 SNED1Q8TER0 1413 aa13.36□□□□□ -0.27
LIN54-210ENST00000510877 TRIM43BA6NCK2 446 aa13.36□□□□□ -0.27
LIN54-210ENST00000510877 MED7O43513 233 aa13.36□□□□□ -0.27
LIN54-210ENST00000510877 IRF1P10914 325 aa13.36□□□□□ -0.27
LIN54-210ENST00000510877 DNA2P51530 1060 aa13.36□□□□□ -0.27
LIN54-210ENST00000510877 PTENP60484 403 aa13.36□□□□□ -0.27
LIN54-210ENST00000510877 PTK2Q05397 1052 aa13.36□□□□□ -0.27
LIN54-210ENST00000510877 MOGSQ13724 837 aa13.36□□□□□ -0.27
LIN54-210ENST00000510877 STARD3Q14849 445 aa13.36□□□□□ -0.27
LIN54-210ENST00000510877 DCLRE1AQ6PJP8 1040 aa13.36□□□□□ -0.27
LIN54-210ENST00000510877 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.36□□□□□ -0.27
LIN54-210ENST00000510877 LEO1Q8WVC0 666 aaPredicted RBP13.36□□□□□ -0.27
LIN54-210ENST00000510877 ATRIPQ8WXE1 791 aa13.36□□□□□ -0.27
LIN54-210ENST00000510877 TRIM43Q96BQ3 446 aaPredicted RBP13.36□□□□□ -0.27
LIN54-210ENST00000510877 RNF19AQ9NV58 838 aa13.36□□□□□ -0.27
LIN54-210ENST00000510877 RSPH14Q9UHP6 348 aa13.36□□□□□ -0.27
LIN54-210ENST00000510877 NDRG2Q9UN36 371 aaKnown RBP13.36□□□□□ -0.27
LIN54-210ENST00000510877 PPP6R2O75170 966 aa13.35□□□□□ -0.27
LIN54-210ENST00000510877 CCNE2O96020 404 aa13.35□□□□□ -0.27
LIN54-210ENST00000510877 PFKFB1P16118 471 aa13.35□□□□□ -0.27
LIN54-210ENST00000510877 FXR2P51116 673 aaKnown RBP eCLIP13.35□□□□□ -0.27
LIN54-210ENST00000510877 DEFB103AP81534 67 aa13.35□□□□□ -0.27
LIN54-210ENST00000510877 ATP2C1P98194 919 aaPredicted RBP13.35□□□□□ -0.27
LIN54-210ENST00000510877 EPC2Q52LR7 807 aa13.35□□□□□ -0.27
LIN54-210ENST00000510877 LMBRD2Q68DH5 695 aaPredicted RBP13.35□□□□□ -0.27
LIN54-210ENST00000510877 LPIN1Q14693 890 aa13.35□□□□□ -0.27
LIN54-210ENST00000510877 ACCSLQ4AC99 568 aa13.35□□□□□ -0.27
LIN54-210ENST00000510877 RNF187Q5TA31 235 aaPredicted RBP13.35□□□□□ -0.27
LIN54-210ENST00000510877 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.35□□□□□ -0.27
LIN54-210ENST00000510877 REEP2Q9BRK0 252 aa13.35□□□□□ -0.27
LIN54-210ENST00000510877 SQORQ9Y6N5 450 aa13.35□□□□□ -0.27
LIN54-210ENST00000510877 SLC26A4O43511 780 aa13.35□□□□□ -0.27
LIN54-210ENST00000510877 PSMD10O75832 226 aa13.35□□□□□ -0.27
LIN54-210ENST00000510877 ACTN2P35609 894 aa13.35□□□□□ -0.27
LIN54-210ENST00000510877 FUT10Q6P4F1 479 aa13.35□□□□□ -0.27
LIN54-210ENST00000510877 SCFD1Q8WVM8 642 aa13.35□□□□□ -0.27
LIN54-210ENST00000510877 SEMA6BQ9H3T3 888 aa13.35□□□□□ -0.27
LIN54-210ENST00000510877 EBAG9O00559 213 aa13.34□□□□□ -0.27
LIN54-210ENST00000510877 MED24O75448 989 aa13.34□□□□□ -0.27
LIN54-210ENST00000510877 MYL1P05976 194 aa13.34□□□□□ -0.27
LIN54-210ENST00000510877 CASQ1P31415 396 aa13.34□□□□□ -0.27
LIN54-210ENST00000510877 BPIFB4P59827 614 aa13.34□□□□□ -0.27
LIN54-210ENST00000510877 ADAM28Q9UKQ2 775 aa13.34□□□□□ -0.27
LIN54-210ENST00000510877 TUBBP07437 444 aa13.34□□□□□ -0.27
LIN54-210ENST00000510877 HOXB8P17481 243 aaPredicted RBP13.34□□□□□ -0.27
LIN54-210ENST00000510877 FKBP3Q00688 224 aaKnown RBP13.34□□□□□ -0.27
LIN54-210ENST00000510877 ANO4Q32M45 955 aa13.34□□□□□ -0.27
LIN54-210ENST00000510877 RINT1Q6NUQ1 792 aa13.34□□□□□ -0.27
LIN54-210ENST00000510877 PLVAPQ9BX97 442 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms