RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 GPR39O43194 453 aa7□□□□□ -1.29
NUP54-209ENST00000510569 RAP2AP10114 183 aa7□□□□□ -1.29
NUP54-209ENST00000510569 ITGAMP11215 1152 aa7□□□□□ -1.29
NUP54-209ENST00000510569 FDXRP22570 491 aa7□□□□□ -1.29
NUP54-209ENST00000510569 PER3P56645 1201 aa7□□□□□ -1.29
NUP54-209ENST00000510569 MPP3Q13368 585 aa7□□□□□ -1.29
NUP54-209ENST00000510569 CT47A1Q5JQC4 288 aaPredicted RBP7□□□□□ -1.29
NUP54-209ENST00000510569 TSHZ3Q63HK5 1081 aa7□□□□□ -1.29
NUP54-209ENST00000510569 LHFPL2Q6ZUX7 228 aa7□□□□□ -1.29
NUP54-209ENST00000510569 SEM1Q6ZVN7 128 aa7□□□□□ -1.29
NUP54-209ENST00000510569 KRT26Q7Z3Y9 468 aa7□□□□□ -1.29
NUP54-209ENST00000510569 SLC9A6Q92581 669 aa7□□□□□ -1.29
NUP54-209ENST00000510569 AHCYL2Q96HN2 611 aaKnown RBP7□□□□□ -1.29
NUP54-209ENST00000510569 ADI1Q9BV57 179 aa7□□□□□ -1.29
NUP54-209ENST00000510569 SENP6Q9GZR1 1112 aaPredicted RBP7□□□□□ -1.29
NUP54-209ENST00000510569 RNPEPQ9H4A4 650 aa7□□□□□ -1.29
NUP54-209ENST00000510569 RNF181Q9P0P0 153 aa7□□□□□ -1.29
NUP54-209ENST00000510569 SLC23A1Q9UHI7 598 aa7□□□□□ -1.29
NUP54-209ENST00000510569 AJAP1Q9UKB5 411 aaPredicted RBP7□□□□□ -1.29
NUP54-209ENST00000510569 K7ESF4 209 aa6.99□□□□□ -1.29
NUP54-209ENST00000510569 TEX33O43247 280 aa6.99□□□□□ -1.29
NUP54-209ENST00000510569 PRKD3O94806 890 aa6.99□□□□□ -1.29
NUP54-209ENST00000510569 POMCP01189 267 aa6.99□□□□□ -1.29
NUP54-209ENST00000510569 CPEP16870 476 aa6.99□□□□□ -1.29
NUP54-209ENST00000510569 FPR1P21462 350 aa6.99□□□□□ -1.29
NUP54-209ENST00000510569 MPLP40238 635 aa6.99□□□□□ -1.29
NUP54-209ENST00000510569 SLC6A9P48067 706 aa6.99□□□□□ -1.29
NUP54-209ENST00000510569 SEPT2Q15019 361 aa6.99□□□□□ -1.29
NUP54-209ENST00000510569 SPDYE7PQ495Y7 208 aa6.99□□□□□ -1.29
NUP54-209ENST00000510569 GPR149Q86SP6 731 aa6.99□□□□□ -1.29
NUP54-209ENST00000510569 SPATS2Q86XZ4 545 aaKnown RBP6.99□□□□□ -1.29
NUP54-209ENST00000510569 BOD1Q96IK1 185 aa6.99□□□□□ -1.29
NUP54-209ENST00000510569 ZSWIM1Q9BR11 485 aa6.99□□□□□ -1.29
NUP54-209ENST00000510569 ALOXE3Q9BYJ1 711 aa6.99□□□□□ -1.29
NUP54-209ENST00000510569 KRTAP9-8Q9BYQ0 159 aa6.99□□□□□ -1.29
NUP54-209ENST00000510569 R3HDMLQ9H3Y0 253 aa6.99□□□□□ -1.29
NUP54-209ENST00000510569 TMEM140Q9NV12 185 aa6.99□□□□□ -1.29
NUP54-209ENST00000510569 DNAJC28Q9NX36 388 aa6.99□□□□□ -1.29
NUP54-209ENST00000510569 ZBTB21Q9ULJ3 1066 aa6.99□□□□□ -1.29
NUP54-209ENST00000510569 COX11Q9Y6N1 276 aa6.99□□□□□ -1.29
NUP54-209ENST00000510569 FGFR4P22455 802 aa6.98□□□□□ -1.29
NUP54-209ENST00000510569 PCSK1P29120 753 aa6.98□□□□□ -1.29
NUP54-209ENST00000510569 ERVK-21P61565 698 aa6.98□□□□□ -1.29
NUP54-209ENST00000510569 CXADRP78310 365 aa6.98□□□□□ -1.29
NUP54-209ENST00000510569 NOMO1Q15155 1222 aa6.98□□□□□ -1.29
NUP54-209ENST00000510569 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.98□□□□□ -1.29
NUP54-209ENST00000510569 LDAHQ9H6V9 325 aa6.98□□□□□ -1.29
NUP54-209ENST00000510569 KCNE5Q9UJ90 142 aa6.98□□□□□ -1.29
NUP54-209ENST00000510569 NOX1Q9Y5S8 564 aa6.98□□□□□ -1.29
NUP54-209ENST00000510569 FAM171A2A8MVW0 826 aa6.97□□□□□ -1.29
NUP54-209ENST00000510569 COL11A2P13942 1736 aaPredicted RBP6.97□□□□□ -1.29
NUP54-209ENST00000510569 UBXN2BQ14CS0 331 aa6.97□□□□□ -1.29
NUP54-209ENST00000510569 ERCC6LQ2NKX8 1250 aa6.97□□□□□ -1.29
NUP54-209ENST00000510569 ZNF529Q6P280 563 aa6.97□□□□□ -1.29
NUP54-209ENST00000510569 SYCE2Q6PIF2 218 aa6.97□□□□□ -1.29
NUP54-209ENST00000510569 SIMC1Q8NDZ2 872 aa6.97□□□□□ -1.29
NUP54-209ENST00000510569 STON2Q8WXE9 905 aa6.97□□□□□ -1.29
NUP54-209ENST00000510569 CYFIP2Q96F07 1278 aa6.97□□□□□ -1.29
NUP54-209ENST00000510569 ZNF277Q9NRM2 450 aaPredicted RBP6.97□□□□□ -1.29
NUP54-209ENST00000510569 FBXO34Q9NWN3 711 aa6.97□□□□□ -1.29
NUP54-209ENST00000510569 INSL6Q9Y581 213 aa6.97□□□□□ -1.29
NUP54-209ENST00000510569 CCDC78A2IDD5 438 aa6.96□□□□□ -1.3
NUP54-209ENST00000510569 GPR32O75388 356 aa6.96□□□□□ -1.3
NUP54-209ENST00000510569 OSMP13725 252 aa6.96□□□□□ -1.3
NUP54-209ENST00000510569 CXCR5P32302 372 aa6.96□□□□□ -1.3
NUP54-209ENST00000510569 C21orf58P58505 322 aa6.96□□□□□ -1.3
NUP54-209ENST00000510569 MTM1Q13496 603 aa6.96□□□□□ -1.3
NUP54-209ENST00000510569 RD3Q7Z3Z2 195 aa6.96□□□□□ -1.3
NUP54-209ENST00000510569 FAM43AQ8N2R8 423 aa6.96□□□□□ -1.3
NUP54-209ENST00000510569 SLC44A3Q8N4M1 653 aa6.96□□□□□ -1.3
NUP54-209ENST00000510569 FAM98AQ8NCA5 519 aaKnown RBP6.96□□□□□ -1.3
NUP54-209ENST00000510569 WDR66Q8TBY9 1149 aa6.96□□□□□ -1.3
NUP54-209ENST00000510569 GALNT9Q9HCQ5 603 aa6.96□□□□□ -1.3
NUP54-209ENST00000510569 TNFRSF18Q9Y5U5 241 aa6.96□□□□□ -1.3
NUP54-209ENST00000510569 ACTL7AQ9Y615 435 aa6.96□□□□□ -1.3
NUP54-209ENST00000510569 PRSS23O95084 383 aa6.95□□□□□ -1.3
NUP54-209ENST00000510569 AMY1AP04745 511 aa6.95□□□□□ -1.3
NUP54-209ENST00000510569 GSPT1P15170 499 aaKnown RBP6.95□□□□□ -1.3
NUP54-209ENST00000510569 SLC6A2P23975 617 aa6.95□□□□□ -1.3
NUP54-209ENST00000510569 MRPS21P82921 87 aaKnown RBP6.95□□□□□ -1.3
NUP54-209ENST00000510569 ATP8B2P98198 1209 aa6.95□□□□□ -1.3
NUP54-209ENST00000510569 RNF219Q5W0B1 726 aaPredicted RBP6.95□□□□□ -1.3
NUP54-209ENST00000510569 OR2I1PQ8NGU4 316 aa6.95□□□□□ -1.3
NUP54-209ENST00000510569 RNF31Q96EP0 1072 aa6.95□□□□□ -1.3
NUP54-209ENST00000510569 MYOCQ99972 504 aa6.95□□□□□ -1.3
NUP54-209ENST00000510569 PCDHGA2Q9Y5H1 932 aa6.95□□□□□ -1.3
NUP54-209ENST00000510569 GPR45Q9Y5Y3 372 aa6.95□□□□□ -1.3
NUP54-209ENST00000510569 MASP2O00187 686 aa6.94□□□□□ -1.3
NUP54-209ENST00000510569 ALAS1P13196 640 aa6.94□□□□□ -1.3
NUP54-209ENST00000510569 POU3F3P20264 500 aaPredicted RBP6.94□□□□□ -1.3
NUP54-209ENST00000510569 AGXTP21549 392 aa6.94□□□□□ -1.3
NUP54-209ENST00000510569 CD38P28907 300 aa6.94□□□□□ -1.3
NUP54-209ENST00000510569 PLA2G5P39877 138 aa6.94□□□□□ -1.3
NUP54-209ENST00000510569 HSD11B2P80365 405 aa6.94□□□□□ -1.3
NUP54-209ENST00000510569 COLEC12Q5KU26 742 aa6.94□□□□□ -1.3
NUP54-209ENST00000510569 COG1Q8WTW3 980 aa6.94□□□□□ -1.3
NUP54-209ENST00000510569 NACC2Q96BF6 587 aa6.94□□□□□ -1.3
NUP54-209ENST00000510569 Q96MF0 132 aa6.94□□□□□ -1.3
NUP54-209ENST00000510569 USP35Q9P2H5 1018 aa6.94□□□□□ -1.3
NUP54-209ENST00000510569 TESQ9UGI8 421 aaKnown RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms