RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 PADI6Q6TGC4 694 aa11.47□□□□□ -0.57
DDX41-211ENST00000510171 DIS3L2Q8IYB7 885 aaKnown RBP11.47□□□□□ -0.57
DDX41-211ENST00000510171 NECAB1Q8N987 351 aa11.47□□□□□ -0.57
DDX41-211ENST00000510171 BSNDQ8WZ55 320 aa11.47□□□□□ -0.57
DDX41-211ENST00000510171 CLDN23Q96B33 292 aa11.47□□□□□ -0.57
DDX41-211ENST00000510171 UROC1Q96N76 676 aa11.47□□□□□ -0.57
DDX41-211ENST00000510171 POLR3CQ9BUI4 534 aaPredicted RBP11.47□□□□□ -0.57
DDX41-211ENST00000510171 ZSCAN32Q9NX65 697 aa11.47□□□□□ -0.57
DDX41-211ENST00000510171 PTPN2P17706 415 aa11.46□□□□□ -0.57
DDX41-211ENST00000510171 IGFBP6P24592 240 aaPredicted RBP11.46□□□□□ -0.57
DDX41-211ENST00000510171 TARSP26639 723 aaKnown RBP11.46□□□□□ -0.57
DDX41-211ENST00000510171 RPA1P27694 616 aa11.46□□□□□ -0.57
DDX41-211ENST00000510171 ELF1P32519 619 aa11.46□□□□□ -0.57
DDX41-211ENST00000510171 MCM7P33993 719 aa11.46□□□□□ -0.57
DDX41-211ENST00000510171 RPS9P46781 194 aaKnown RBP11.46□□□□□ -0.57
DDX41-211ENST00000510171 CLCNKBP51801 687 aa11.46□□□□□ -0.57
DDX41-211ENST00000510171 EFNA5P52803 228 aa11.46□□□□□ -0.57
DDX41-211ENST00000510171 ADCY1Q08828 1119 aa11.46□□□□□ -0.57
DDX41-211ENST00000510171 UPP1Q16831 310 aa11.46□□□□□ -0.57
DDX41-211ENST00000510171 GLRA4Q5JXX5 417 aa11.46□□□□□ -0.57
DDX41-211ENST00000510171 ATF7IP2Q5U623 682 aa11.46□□□□□ -0.57
DDX41-211ENST00000510171 CD300LGQ6UXG3 332 aa11.46□□□□□ -0.57
DDX41-211ENST00000510171 APBB1IPQ7Z5R6 666 aaPredicted RBP11.46□□□□□ -0.57
DDX41-211ENST00000510171 ZBTB44Q8NCP5 570 aa11.46□□□□□ -0.57
DDX41-211ENST00000510171 ZNF461Q8TAF7 563 aa11.46□□□□□ -0.57
DDX41-211ENST00000510171 ERMNQ8TAM6 284 aa11.46□□□□□ -0.57
DDX41-211ENST00000510171 ELSPBP1Q96BH3 223 aa11.46□□□□□ -0.57
DDX41-211ENST00000510171 DDX27Q96GQ7 796 aaKnown RBP11.46□□□□□ -0.57
DDX41-211ENST00000510171 IFT74Q96LB3 600 aa11.46□□□□□ -0.57
DDX41-211ENST00000510171 PPP1R10Q96QC0 940 aaKnown RBP11.46□□□□□ -0.57
DDX41-211ENST00000510171 PLA2G2FQ9BZM2 168 aa11.46□□□□□ -0.57
DDX41-211ENST00000510171 CCDC113Q9H0I3 377 aa11.46□□□□□ -0.57
DDX41-211ENST00000510171 TMEM60Q9H2L4 133 aa11.46□□□□□ -0.57
DDX41-211ENST00000510171 AVENQ9NQS1 362 aaPredicted RBP11.46□□□□□ -0.57
DDX41-211ENST00000510171 SPTBN4Q9H254 2564 aa11.45□□□□□ -0.58
DDX41-211ENST00000510171 C2orf16Q68DN1 1984 aa11.45□□□□□ -0.58
DDX41-211ENST00000510171 WDR81Q562E7 1941 aa11.45□□□□□ -0.58
DDX41-211ENST00000510171 SMIM28A0A1B0GU29 152 aa11.45□□□□□ -0.58
DDX41-211ENST00000510171 I3L4J1 428 aa11.45□□□□□ -0.58
DDX41-211ENST00000510171 PRRG1O14668 218 aa11.45□□□□□ -0.58
DDX41-211ENST00000510171 ZNF197O14709 1029 aa11.45□□□□□ -0.58
DDX41-211ENST00000510171 TBC1D4O60343 1298 aa11.45□□□□□ -0.58
DDX41-211ENST00000510171 LRG1P02750 347 aa11.45□□□□□ -0.58
DDX41-211ENST00000510171 CENPBP07199 599 aaPredicted RBP11.45□□□□□ -0.58
DDX41-211ENST00000510171 TKTP29401 623 aaKnown RBP11.45□□□□□ -0.58
DDX41-211ENST00000510171 FOSBP53539 338 aa11.45□□□□□ -0.58
DDX41-211ENST00000510171 SLC5A9Q2M3M2 681 aa11.45□□□□□ -0.58
DDX41-211ENST00000510171 NT5DC1Q5TFE4 455 aa11.45□□□□□ -0.58
DDX41-211ENST00000510171 TANGO2Q6ICL3 276 aa11.45□□□□□ -0.58
DDX41-211ENST00000510171 SLC8B1Q6J4K2 584 aa11.45□□□□□ -0.58
DDX41-211ENST00000510171 TSSK4Q6SA08 328 aa11.45□□□□□ -0.58
DDX41-211ENST00000510171 NELL1Q92832 810 aa11.45□□□□□ -0.58
DDX41-211ENST00000510171 EPC1Q9H2F5 836 aa11.45□□□□□ -0.58
DDX41-211ENST00000510171 ZFP14Q9HCL3 533 aa11.45□□□□□ -0.58
DDX41-211ENST00000510171 HEBP1Q9NRV9 189 aa11.45□□□□□ -0.58
DDX41-211ENST00000510171 EP300Q09472 2414 aaPredicted RBP11.45□□□□□ -0.58
DDX41-211ENST00000510171 ARHGEF37A1IGU5 675 aa11.44□□□□□ -0.58
DDX41-211ENST00000510171 PRR5-ARHGAP8B1AHC4 643 aa11.44□□□□□ -0.58
DDX41-211ENST00000510171 K7ERI5 159 aa11.44□□□□□ -0.58
DDX41-211ENST00000510171 MAN2B1O00754 1011 aa11.44□□□□□ -0.58
DDX41-211ENST00000510171 LILRB5O75023 590 aa11.44□□□□□ -0.58
DDX41-211ENST00000510171 ABLIM3O94929 683 aa11.44□□□□□ -0.58
DDX41-211ENST00000510171 EDN1P05305 212 aa11.44□□□□□ -0.58
DDX41-211ENST00000510171 CEBPBP17676 345 aa11.44□□□□□ -0.58
DDX41-211ENST00000510171 BRCC3P46736 316 aa11.44□□□□□ -0.58
DDX41-211ENST00000510171 YARSP54577 528 aaKnown RBP11.44□□□□□ -0.58
DDX41-211ENST00000510171 ARPP19P56211 112 aa11.44□□□□□ -0.58
DDX41-211ENST00000510171 ARHGAP8P85298 464 aa11.44□□□□□ -0.58
DDX41-211ENST00000510171 LMNB2Q03252 620 aa11.44□□□□□ -0.58
DDX41-211ENST00000510171 MTAPQ13126 283 aa11.44□□□□□ -0.58
DDX41-211ENST00000510171 FZD5Q13467 585 aa11.44□□□□□ -0.58
DDX41-211ENST00000510171 SAFBQ15424 915 aaKnown RBP eCLIP11.44□□□□□ -0.58
DDX41-211ENST00000510171 ME3Q16798 604 aa11.44□□□□□ -0.58
DDX41-211ENST00000510171 NSUN7Q8NE18 718 aaKnown RBP11.44□□□□□ -0.58
DDX41-211ENST00000510171 KIFAP3Q92845 792 aa11.44□□□□□ -0.58
DDX41-211ENST00000510171 DNASE1L2Q92874 299 aa11.44□□□□□ -0.58
DDX41-211ENST00000510171 GTF3C6Q969F1 213 aa11.44□□□□□ -0.58
DDX41-211ENST00000510171 CORO1BQ9BR76 489 aa11.44□□□□□ -0.58
DDX41-211ENST00000510171 KIFC3Q9BVG8 833 aa11.44□□□□□ -0.58
DDX41-211ENST00000510171 TRMT61BQ9BVS5 477 aaKnown RBP11.44□□□□□ -0.58
DDX41-211ENST00000510171 CCDC94Q9BW85 323 aaPredicted RBP11.44□□□□□ -0.58
DDX41-211ENST00000510171 FAM126AQ9BYI3 521 aaPredicted RBP11.44□□□□□ -0.58
DDX41-211ENST00000510171 BRD9Q9H8M2 597 aa11.44□□□□□ -0.58
DDX41-211ENST00000510171 CYP4F11Q9HBI6 524 aa11.44□□□□□ -0.58
DDX41-211ENST00000510171 GOLGA2P5Q9HBQ8 144 aa11.44□□□□□ -0.58
DDX41-211ENST00000510171 POLD4Q9HCU8 107 aa11.44□□□□□ -0.58
DDX41-211ENST00000510171 PRMT8Q9NR22 394 aaPredicted RBP11.44□□□□□ -0.58
DDX41-211ENST00000510171 SLC38A7Q9NVC3 462 aa11.44□□□□□ -0.58
DDX41-211ENST00000510171 SMG5Q9UPR3 1016 aaKnown RBP11.44□□□□□ -0.58
DDX41-211ENST00000510171 VPS13AQ96RL7 3174 aa11.43□□□□□ -0.58
DDX41-211ENST00000510171 H7C4K7 107 aa11.43□□□□□ -0.58
DDX41-211ENST00000510171 JAK2O60674 1132 aa11.43□□□□□ -0.58
DDX41-211ENST00000510171 MICAL2O94851 1124 aa11.43□□□□□ -0.58
DDX41-211ENST00000510171 ATF2P15336 505 aa11.43□□□□□ -0.58
DDX41-211ENST00000510171 MUTP22033 750 aa11.43□□□□□ -0.58
DDX41-211ENST00000510171 GRM5P41594 1212 aa11.43□□□□□ -0.58
DDX41-211ENST00000510171 ATXN1P54253 815 aaKnown RBP11.43□□□□□ -0.58
DDX41-211ENST00000510171 NRLP54845 237 aa11.43□□□□□ -0.58
DDX41-211ENST00000510171 ROR1Q01973 937 aa11.43□□□□□ -0.58
DDX41-211ENST00000510171 ZNF174Q15697 407 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms