RNA–Protein interactions for RNA: ENST00000509769.5

USP53-205, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 1 (best)

Gene USP53, Length 4,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-205ENST00000509769 GSTO1P78417 241 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 LGALS3BPQ08380 585 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 RAPGEF1Q13905 1077 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 CAMK1Q14012 370 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 RTN1Q16799 776 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 CCDC58Q4VC31 144 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 ALFQ53S48 1182 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 TAF1BQ53T94 588 aaPredicted RBP3.76□□□□□ -1.81
USP53-205ENST00000509769 HERC4Q5GLZ8 1057 aaPredicted RBP3.76□□□□□ -1.81
USP53-205ENST00000509769 TCEAL5Q5H9L2 206 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 KIAA1755Q5JYT7 1200 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 TRIQKQ629K1 86 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 CENPPQ6IPU0 288 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 MIS18BP1Q6P0N0 1132 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 ARMCX5Q6P1M9 558 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 CLEC17AQ6ZS10 378 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 SH3BP5LQ7L8J4 393 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 ELOA2Q8IYF1 753 aaPredicted RBP3.76□□□□□ -1.81
USP53-205ENST00000509769 ULK2Q8IYT8 1036 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 UBE2J2Q8N2K1 259 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 AADATQ8N5Z0 425 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 SNX31Q8N9S9 440 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 XXYLT1Q8NBI6 393 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 KBTBD8Q8NFY9 601 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 FAM172AQ8WUF8 416 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 FAM162AQ96A26 154 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 CHID1Q9BWS9 393 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 TEKT3Q9BXF9 490 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 TMEM168Q9H0V1 697 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 PSTPIP2Q9H939 334 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 METTL5Q9NRN9 209 aaKnown RBP3.76□□□□□ -1.81
USP53-205ENST00000509769 TBK1Q9UHD2 729 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 DTNAQ9Y4J8 743 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 UBE2QL1A1L167 161 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 SMCO3A2RU48 225 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 KRT87PA6NCN2 255 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 EXTL3O43909 919 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 TMCC2O75069 709 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 CSPG5O95196 566 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 RTN3O95197 1032 aaPredicted RBP3.76□□□□□ -1.81
USP53-205ENST00000509769 SLC4A1P02730 911 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 RFX1P22670 979 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 NR4A1P22736 598 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 MAPK1P28482 360 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 MAGEA3P43357 314 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 PHKA1P46020 1223 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 RPL5P46777 297 aaKnown RBP3.76□□□□□ -1.81
USP53-205ENST00000509769 AKR1D1P51857 326 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 POLGP54098 1239 aaPredicted RBP3.76□□□□□ -1.81
USP53-205ENST00000509769 USP14P54578 494 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 TGFB2P61812 414 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 GUCY2DQ02846 1103 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 RIPK1Q13546 671 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 PABPC1LQ4VXU2 614 aaKnown RBP3.76□□□□□ -1.81
USP53-205ENST00000509769 SPANXN2Q5MJ10 180 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 FAM83BQ5T0W9 1011 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 HECTD3Q5T447 861 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 ANKRD26P1Q6NSI1 321 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 TAF2Q6P1X5 1199 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 TTC33Q6PID6 262 aaPredicted RBP3.76□□□□□ -1.81
USP53-205ENST00000509769 CCDC137Q6PK04 289 aaKnown RBP3.76□□□□□ -1.81
USP53-205ENST00000509769 ABRAXAS1Q6UWZ7 409 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 CYP2U1Q7Z449 544 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 PACS2Q86VP3 889 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 PALB2Q86YC2 1186 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 TPH2Q8IWU9 490 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 SIX5Q8N196 739 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 STAG2Q8N3U4 1231 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 LRRC17Q8N6Y2 441 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 FAM133AQ8N9E0 248 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 LRRC20Q8TCA0 184 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 DQX1Q8TE96 717 aaKnown RBP3.76□□□□□ -1.81
USP53-205ENST00000509769 PIGOQ8TEQ8 1089 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 SPIRE2Q8WWL2 714 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 ZC3H10Q96K80 434 aaKnown RBP3.76□□□□□ -1.81
USP53-205ENST00000509769 ELAC2Q9BQ52 826 aaKnown RBP3.76□□□□□ -1.81
USP53-205ENST00000509769 FAM167BQ9BTA0 163 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 OSBPL8Q9BZF1 889 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 EFCAB1Q9HAE3 211 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 IL1RL2Q9HB29 575 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 SAR1AQ9NR31 198 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 IL20Q9NYY1 176 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 RTEL1Q9NZ71 1219 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 TFCP2L1Q9NZI6 479 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 RAPGEFL1Q9UHV5 662 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 NOVA2Q9UNW9 492 aaKnown RBP3.76□□□□□ -1.81
USP53-205ENST00000509769 GIT1Q9Y2X7 761 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 FADS3Q9Y5Q0 445 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 SBNO2Q9Y2G9 1366 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 PFASO15067 1338 aa3.76□□□□□ -1.81
USP53-205ENST00000509769 CCDC182A6NF36 153 aa3.75□□□□□ -1.81
USP53-205ENST00000509769 SLCO1B7G3V0H7 640 aa3.75□□□□□ -1.81
USP53-205ENST00000509769 SGK1O00141 431 aa3.75□□□□□ -1.81
USP53-205ENST00000509769 EXOC3O60645 756 aa3.75□□□□□ -1.81
USP53-205ENST00000509769 PFKFB2O60825 505 aa3.75□□□□□ -1.81
USP53-205ENST00000509769 TNFRSF21O75509 655 aa3.75□□□□□ -1.81
USP53-205ENST00000509769 ALBP02768 609 aa3.75□□□□□ -1.81
USP53-205ENST00000509769 HLA-DPA1P20036 260 aa3.75□□□□□ -1.81
USP53-205ENST00000509769 CCNA2P20248 432 aa3.75□□□□□ -1.81
USP53-205ENST00000509769 OSBPP22059 807 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms