RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 ELAVL2Q12926 359 aaKnown RBP19.63■□□□□ 0.73
TPM3-220ENST00000509601 SLC10A6Q3KNW5 377 aa19.63■□□□□ 0.73
TPM3-220ENST00000509601 CYP26C1Q6V0L0 522 aa19.63■□□□□ 0.73
TPM3-220ENST00000509601 PLCD3Q8N3E9 789 aa19.63■□□□□ 0.73
TPM3-220ENST00000509601 UROC1Q96N76 676 aa19.63■□□□□ 0.73
TPM3-220ENST00000509601 CLIC6Q96NY7 704 aa19.63■□□□□ 0.73
TPM3-220ENST00000509601 FIZ1Q96SL8 496 aa19.63■□□□□ 0.73
TPM3-220ENST00000509601 TOPORSQ9NS56 1045 aaPredicted RBP19.63■□□□□ 0.73
TPM3-220ENST00000509601 CNTN3Q9P232 1028 aa19.63■□□□□ 0.73
TPM3-220ENST00000509601 ZNF318Q5VUA4 2279 aa19.63■□□□□ 0.73
TPM3-220ENST00000509601 VWA8A3KMH1 1905 aa19.63■□□□□ 0.73
TPM3-220ENST00000509601 WDFY4Q6ZS81 3184 aa19.62■□□□□ 0.73
TPM3-220ENST00000509601 ASGR2P07307 311 aa19.62■□□□□ 0.73
TPM3-220ENST00000509601 HARSP12081 509 aaKnown RBP19.62■□□□□ 0.73
TPM3-220ENST00000509601 BRCC3P46736 316 aa19.62■□□□□ 0.73
TPM3-220ENST00000509601 CREMQ03060 361 aa19.62■□□□□ 0.73
TPM3-220ENST00000509601 MCL1Q07820 350 aa19.62■□□□□ 0.73
TPM3-220ENST00000509601 PSMD5Q16401 504 aa19.62■□□□□ 0.73
TPM3-220ENST00000509601 RSPO2Q6UXX9 243 aaPredicted RBP19.62■□□□□ 0.73
TPM3-220ENST00000509601 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.62■□□□□ 0.73
TPM3-220ENST00000509601 MYCT1Q8N699 235 aa19.62■□□□□ 0.73
TPM3-220ENST00000509601 TDRD5Q8NAT2 981 aaKnown RBP19.62■□□□□ 0.73
TPM3-220ENST00000509601 PBXIP1Q96AQ6 731 aa19.62■□□□□ 0.73
TPM3-220ENST00000509601 DDX27Q96GQ7 796 aaKnown RBP19.62■□□□□ 0.73
TPM3-220ENST00000509601 MFSD14AQ96MC6 490 aa19.62■□□□□ 0.73
TPM3-220ENST00000509601 WDR6Q9NNW5 1121 aaKnown RBP19.62■□□□□ 0.73
TPM3-220ENST00000509601 MUC6Q6W4X9 2439 aa19.62■□□□□ 0.73
TPM3-220ENST00000509601 ZDBF2Q9HCK1 2354 aa19.62■□□□□ 0.73
TPM3-220ENST00000509601 I3L4J1 428 aa19.61■□□□□ 0.73
TPM3-220ENST00000509601 CLDN3O15551 220 aa19.61■□□□□ 0.73
TPM3-220ENST00000509601 N4BP1O75113 896 aaKnown RBP19.61■□□□□ 0.73
TPM3-220ENST00000509601 ZMYND10O75800 440 aa19.61■□□□□ 0.73
TPM3-220ENST00000509601 CEBPZQ03701 1054 aaKnown RBP19.61■□□□□ 0.73
TPM3-220ENST00000509601 NOLC1Q14978 699 aaKnown RBP eCLIP19.61■□□□□ 0.73
TPM3-220ENST00000509601 CCDC149Q6ZUS6 474 aa19.61■□□□□ 0.73
TPM3-220ENST00000509601 OTOP3Q7RTS5 596 aa19.61■□□□□ 0.73
TPM3-220ENST00000509601 LARP4BQ92615 738 aaKnown RBP19.61■□□□□ 0.73
TPM3-220ENST00000509601 SNX21Q969T3 373 aa19.61■□□□□ 0.73
TPM3-220ENST00000509601 C18orf25Q96B23 403 aaPredicted RBP19.61■□□□□ 0.73
TPM3-220ENST00000509601 USP28Q96RU2 1077 aa19.61■□□□□ 0.73
TPM3-220ENST00000509601 PRKD2Q9BZL6 878 aa19.61■□□□□ 0.73
TPM3-220ENST00000509601 SMOC2Q9H3U7 446 aa19.61■□□□□ 0.73
TPM3-220ENST00000509601 PARVGQ9HBI0 331 aa19.61■□□□□ 0.73
TPM3-220ENST00000509601 ANKFY1Q9P2R3 1169 aa19.61■□□□□ 0.73
TPM3-220ENST00000509601 FBXW11Q9UKB1 542 aa19.61■□□□□ 0.73
TPM3-220ENST00000509601 TBX20Q9UMR3 447 aa19.61■□□□□ 0.73
TPM3-220ENST00000509601 SORCS3Q9UPU3 1222 aa19.61■□□□□ 0.73
TPM3-220ENST00000509601 DOCK6Q96HP0 2047 aa19.61■□□□□ 0.73
TPM3-220ENST00000509601 H0YCG3 227 aa19.6■□□□□ 0.73
TPM3-220ENST00000509601 STX6O43752 255 aa19.6■□□□□ 0.73
TPM3-220ENST00000509601 TRAK2O60296 914 aa19.6■□□□□ 0.73
TPM3-220ENST00000509601 FAM13AO94988 1023 aa19.6■□□□□ 0.73
TPM3-220ENST00000509601 PLA2G5P39877 138 aa19.6■□□□□ 0.73
TPM3-220ENST00000509601 SLC39A14Q15043 492 aa19.6■□□□□ 0.73
TPM3-220ENST00000509601 ELMSAN1Q6PJG2 1045 aa19.6■□□□□ 0.73
TPM3-220ENST00000509601 SMG7Q92540 1137 aaKnown RBP19.6■□□□□ 0.73
TPM3-220ENST00000509601 ACSF2Q96CM8 615 aaPredicted RBP19.6■□□□□ 0.73
TPM3-220ENST00000509601 SLC38A7Q9NVC3 462 aa19.6■□□□□ 0.73
TPM3-220ENST00000509601 ZDHHC7Q9NXF8 308 aa19.6■□□□□ 0.73
TPM3-220ENST00000509601 MORC2Q9Y6X9 1032 aaPredicted RBP19.6■□□□□ 0.73
TPM3-220ENST00000509601 DENND4AQ7Z401 1863 aa19.6■□□□□ 0.73
TPM3-220ENST00000509601 CITO14578 2027 aa19.59■□□□□ 0.73
TPM3-220ENST00000509601 PODXLO00592 558 aa19.59■□□□□ 0.73
TPM3-220ENST00000509601 FAM189A1O60320 539 aa19.59■□□□□ 0.73
TPM3-220ENST00000509601 PIGRP01833 764 aa19.59■□□□□ 0.73
TPM3-220ENST00000509601 TKTP29401 623 aaKnown RBP19.59■□□□□ 0.73
TPM3-220ENST00000509601 NMT1P30419 496 aaKnown RBP19.59■□□□□ 0.73
TPM3-220ENST00000509601 RPL9P32969 192 aaKnown RBP19.59■□□□□ 0.73
TPM3-220ENST00000509601 OR1D2P34982 312 aa19.59■□□□□ 0.73
TPM3-220ENST00000509601 GTF2BQ00403 316 aa19.59■□□□□ 0.73
TPM3-220ENST00000509601 RAB33AQ14088 237 aa19.59■□□□□ 0.73
TPM3-220ENST00000509601 PDXDC1Q6P996 788 aa19.59■□□□□ 0.73
TPM3-220ENST00000509601 TMEM130Q8N3G9 435 aa19.59■□□□□ 0.73
TPM3-220ENST00000509601 RASSF8Q8NHQ8 419 aa19.59■□□□□ 0.73
TPM3-220ENST00000509601 FAM122AQ96E09 287 aa19.59■□□□□ 0.73
TPM3-220ENST00000509601 ZSCAN16Q9H4T2 348 aaPredicted RBP19.59■□□□□ 0.73
TPM3-220ENST00000509601 MTRRQ9UBK8 725 aa19.59■□□□□ 0.73
TPM3-220ENST00000509601 BACE2Q9Y5Z0 518 aa19.59■□□□□ 0.73
TPM3-220ENST00000509601 TTC26A0AVF1 554 aa19.58■□□□□ 0.72
TPM3-220ENST00000509601 TRAPPC3O43617 180 aa19.58■□□□□ 0.72
TPM3-220ENST00000509601 KRT18P05783 430 aaKnown RBP19.58■□□□□ 0.72
TPM3-220ENST00000509601 CLTAP09496 248 aa19.58■□□□□ 0.72
TPM3-220ENST00000509601 SCP2P22307 547 aa19.58■□□□□ 0.72
TPM3-220ENST00000509601 TNFSF9P41273 254 aa19.58■□□□□ 0.72
TPM3-220ENST00000509601 ZBTB6Q15916 424 aa19.58■□□□□ 0.72
TPM3-220ENST00000509601 SLC39A4Q6P5W5 647 aa19.58■□□□□ 0.72
TPM3-220ENST00000509601 UBALD2Q8IYN6 164 aa19.58■□□□□ 0.72
TPM3-220ENST00000509601 PLEKHA5Q9HAU0 1116 aa19.58■□□□□ 0.72
TPM3-220ENST00000509601 CCDC39Q9UFE4 941 aa19.58■□□□□ 0.72
TPM3-220ENST00000509601 TBC1D4O60343 1298 aa19.57■□□□□ 0.72
TPM3-220ENST00000509601 PDGFBP01127 241 aaPredicted RBP19.57■□□□□ 0.72
TPM3-220ENST00000509601 ADRB2P07550 413 aa19.57■□□□□ 0.72
TPM3-220ENST00000509601 CXCL8P10145 99 aa19.57■□□□□ 0.72
TPM3-220ENST00000509601 SPAG1Q07617 926 aa19.57■□□□□ 0.72
TPM3-220ENST00000509601 MTMR3Q13615 1198 aa19.57■□□□□ 0.72
TPM3-220ENST00000509601 MRPL58Q14197 206 aaKnown RBP19.57■□□□□ 0.72
TPM3-220ENST00000509601 ZBTB41Q5SVQ8 909 aa19.57■□□□□ 0.72
TPM3-220ENST00000509601 IER5LQ5T953 404 aa19.57■□□□□ 0.72
TPM3-220ENST00000509601 RRAGBQ5VZM2 374 aa19.57■□□□□ 0.72
TPM3-220ENST00000509601 FBXL6Q8N531 539 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms