RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 TMEM189-UBE2V1I3L0A0 370 aa16.86■□□□□ 0.29
TPM3-219ENST00000509409 I3L4J1 428 aa16.86■□□□□ 0.29
TPM3-219ENST00000509409 PAPLNO95428 1278 aa16.86■□□□□ 0.29
TPM3-219ENST00000509409 MCF2P10911 925 aa16.86■□□□□ 0.29
TPM3-219ENST00000509409 FGFR3P22607 806 aa16.86■□□□□ 0.29
TPM3-219ENST00000509409 MATR3P43243 847 aaKnown RBP eCLIP16.86■□□□□ 0.29
TPM3-219ENST00000509409 BRCC3P46736 316 aa16.86■□□□□ 0.29
TPM3-219ENST00000509409 NTHL1P78549 312 aa16.86■□□□□ 0.29
TPM3-219ENST00000509409 ATP2C1P98194 919 aaPredicted RBP16.86■□□□□ 0.29
TPM3-219ENST00000509409 RAB33AQ14088 237 aa16.86■□□□□ 0.29
TPM3-219ENST00000509409 UPP1Q16831 310 aa16.86■□□□□ 0.29
TPM3-219ENST00000509409 AXDND1Q5T1B0 1012 aaPredicted RBP16.86■□□□□ 0.29
TPM3-219ENST00000509409 TAS1R3Q7RTX0 852 aa16.86■□□□□ 0.29
TPM3-219ENST00000509409 ST13P5Q8NFI4 369 aaPredicted RBP16.86■□□□□ 0.29
TPM3-219ENST00000509409 DDX27Q96GQ7 796 aaKnown RBP16.86■□□□□ 0.29
TPM3-219ENST00000509409 RTP3Q9BQQ7 232 aa16.86■□□□□ 0.29
TPM3-219ENST00000509409 PTPRHQ9HD43 1115 aa16.86■□□□□ 0.29
TPM3-219ENST00000509409 SLC38A7Q9NVC3 462 aa16.86■□□□□ 0.29
TPM3-219ENST00000509409 WNT16Q9UBV4 365 aa16.86■□□□□ 0.29
TPM3-219ENST00000509409 CA14Q9ULX7 337 aa16.86■□□□□ 0.29
TPM3-219ENST00000509409 SMC3Q9UQE7 1217 aa16.86■□□□□ 0.29
TPM3-219ENST00000509409 PODXLO00592 558 aa16.85■□□□□ 0.29
TPM3-219ENST00000509409 PI15O43692 258 aa16.85■□□□□ 0.29
TPM3-219ENST00000509409 PLS3P13797 630 aa16.85■□□□□ 0.29
TPM3-219ENST00000509409 NPR3P17342 541 aa16.85■□□□□ 0.29
TPM3-219ENST00000509409 GUCY2CP25092 1073 aa16.85■□□□□ 0.29
TPM3-219ENST00000509409 TKTP29401 623 aaKnown RBP16.85■□□□□ 0.29
TPM3-219ENST00000509409 MAPK7Q13164 816 aa16.85■□□□□ 0.29
TPM3-219ENST00000509409 UVSSAQ2YD98 709 aa16.85■□□□□ 0.29
TPM3-219ENST00000509409 MPZL3Q6UWV2 235 aa16.85■□□□□ 0.29
TPM3-219ENST00000509409 ALKAL1Q6UXT8 129 aa16.85■□□□□ 0.29
TPM3-219ENST00000509409 ANKS3Q6ZW76 656 aa16.85■□□□□ 0.29
TPM3-219ENST00000509409 SYT2Q8N9I0 419 aaPredicted RBP16.85■□□□□ 0.29
TPM3-219ENST00000509409 SLC7A14Q8TBB6 771 aa16.85■□□□□ 0.29
TPM3-219ENST00000509409 ZBTB45Q96K62 511 aaPredicted RBP16.85■□□□□ 0.29
TPM3-219ENST00000509409 PNMA5Q96PV4 448 aa16.85■□□□□ 0.29
TPM3-219ENST00000509409 MTRRQ9UBK8 725 aa16.85■□□□□ 0.29
TPM3-219ENST00000509409 CDY1Q9Y6F8 540 aa16.85■□□□□ 0.29
TPM3-219ENST00000509409 ZFP37Q9Y6Q3 630 aaPredicted RBP16.85■□□□□ 0.29
TPM3-219ENST00000509409 GFRA3O60609 400 aa16.84■□□□□ 0.29
TPM3-219ENST00000509409 PLA2G4BP0C869 781 aa16.84■□□□□ 0.29
TPM3-219ENST00000509409 SRFP11831 508 aa16.84■□□□□ 0.29
TPM3-219ENST00000509409 AOC1P19801 751 aa16.84■□□□□ 0.29
TPM3-219ENST00000509409 ELF1P32519 619 aa16.84■□□□□ 0.29
TPM3-219ENST00000509409 MCM2P49736 904 aa16.84■□□□□ 0.29
TPM3-219ENST00000509409 XKR4Q5GH76 650 aa16.84■□□□□ 0.29
TPM3-219ENST00000509409 HYIQ5T013 277 aa16.84■□□□□ 0.29
TPM3-219ENST00000509409 LARP1BQ659C4 914 aaKnown RBP16.84■□□□□ 0.29
TPM3-219ENST00000509409 CWF19L1Q69YN2 538 aaKnown RBP16.84■□□□□ 0.29
TPM3-219ENST00000509409 CD300LGQ6UXG3 332 aa16.84■□□□□ 0.29
TPM3-219ENST00000509409 KCTD17Q8N5Z5 321 aa16.84■□□□□ 0.29
TPM3-219ENST00000509409 SPIRE2Q8WWL2 714 aa16.84■□□□□ 0.29
TPM3-219ENST00000509409 NTPCRQ9BSD7 190 aaKnown RBP16.84■□□□□ 0.29
TPM3-219ENST00000509409 ANKFY1Q9P2R3 1169 aa16.84■□□□□ 0.29
TPM3-219ENST00000509409 CDH7Q9ULB5 785 aa16.84■□□□□ 0.29
TPM3-219ENST00000509409 NUB1Q9Y5A7 615 aa16.84■□□□□ 0.29
TPM3-219ENST00000509409 BACE2Q9Y5Z0 518 aa16.84■□□□□ 0.29
TPM3-219ENST00000509409 NUMBLQ9Y6R0 609 aa16.84■□□□□ 0.29
TPM3-219ENST00000509409 NPHP3-ACAD11A0A0J9YXS1 232 aa16.83■□□□□ 0.28
TPM3-219ENST00000509409 HOXA9P31269 272 aa16.83■□□□□ 0.28
TPM3-219ENST00000509409 PLXNA3P51805 1871 aa16.83■□□□□ 0.28
TPM3-219ENST00000509409 ARPP19P56211 112 aa16.83■□□□□ 0.28
TPM3-219ENST00000509409 SOX4Q06945 474 aaPredicted RBP16.83■□□□□ 0.28
TPM3-219ENST00000509409 ARL6IP4Q66PJ3 421 aaKnown RBP16.83■□□□□ 0.28
TPM3-219ENST00000509409 RSPO2Q6UXX9 243 aaPredicted RBP16.83■□□□□ 0.28
TPM3-219ENST00000509409 C3orf58Q8NDZ4 430 aa16.83■□□□□ 0.28
TPM3-219ENST00000509409 BICD1Q96G01 975 aa16.83■□□□□ 0.28
TPM3-219ENST00000509409 SNX27Q96L92 541 aa16.83■□□□□ 0.28
TPM3-219ENST00000509409 ZMAT2Q96NC0 199 aaKnown RBP16.83■□□□□ 0.28
TPM3-219ENST00000509409 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.83■□□□□ 0.28
TPM3-219ENST00000509409 KRBA1A5PL33 1030 aa16.82■□□□□ 0.28
TPM3-219ENST00000509409 ANHXE9PGG2 379 aa16.82■□□□□ 0.28
TPM3-219ENST00000509409 H7C4K7 107 aa16.82■□□□□ 0.28
TPM3-219ENST00000509409 CLDN3O15551 220 aa16.82■□□□□ 0.28
TPM3-219ENST00000509409 TOM1L1O75674 476 aa16.82■□□□□ 0.28
TPM3-219ENST00000509409 CD2BP2O95400 341 aaKnown RBP16.82■□□□□ 0.28
TPM3-219ENST00000509409 KCNE1P15382 129 aa16.82■□□□□ 0.28
TPM3-219ENST00000509409 PROZP22891 400 aa16.82■□□□□ 0.28
TPM3-219ENST00000509409 RPL9P32969 192 aaKnown RBP16.82■□□□□ 0.28
TPM3-219ENST00000509409 UBA7P41226 1012 aa16.82■□□□□ 0.28
TPM3-219ENST00000509409 SLC12A3P55017 1021 aa16.82■□□□□ 0.28
TPM3-219ENST00000509409 HTR4Q13639 388 aa16.82■□□□□ 0.28
TPM3-219ENST00000509409 DHX8Q14562 1220 aaKnown RBP16.82■□□□□ 0.28
TPM3-219ENST00000509409 NOLC1Q14978 699 aaKnown RBP eCLIP16.82■□□□□ 0.28
TPM3-219ENST00000509409 SEZ6Q53EL9 994 aa16.82■□□□□ 0.28
TPM3-219ENST00000509409 TMEM161BQ8NDZ6 487 aa16.82■□□□□ 0.28
TPM3-219ENST00000509409 ITFG1Q8TB96 612 aa16.82■□□□□ 0.28
TPM3-219ENST00000509409 GPR152Q8TDT2 470 aa16.82■□□□□ 0.28
TPM3-219ENST00000509409 C18orf25Q96B23 403 aaPredicted RBP16.82■□□□□ 0.28
TPM3-219ENST00000509409 CALML4Q96GE6 196 aa16.82■□□□□ 0.28
TPM3-219ENST00000509409 KCND2Q9NZV8 630 aa16.82■□□□□ 0.28
TPM3-219ENST00000509409 CNTN3Q9P232 1028 aa16.82■□□□□ 0.28
TPM3-219ENST00000509409 LARSQ9P2J5 1176 aaKnown RBP16.82■□□□□ 0.28
TPM3-219ENST00000509409 C2orf16Q68DN1 1984 aa16.81■□□□□ 0.28
TPM3-219ENST00000509409 H0YCG3 227 aa16.81■□□□□ 0.28
TPM3-219ENST00000509409 MAPTP10636 758 aaKnown RBP16.81■□□□□ 0.28
TPM3-219ENST00000509409 MARCKSP29966 332 aaPredicted RBP16.81■□□□□ 0.28
TPM3-219ENST00000509409 PABPC1LQ4VXU2 614 aaKnown RBP16.81■□□□□ 0.28
TPM3-219ENST00000509409 VARS2Q5ST30 1063 aaKnown RBP16.81■□□□□ 0.28
TPM3-219ENST00000509409 PARM1Q6UWI2 310 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms