RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 FUCA2Q9BTY2 467 aa16.03■□□□□ 0.16
HMGCL-208ENST00000509389 NT5C3AQ9H0P0 336 aa16.03■□□□□ 0.16
HMGCL-208ENST00000509389 POLD4Q9HCU8 107 aa16.03■□□□□ 0.16
HMGCL-208ENST00000509389 IGSF9Q9P2J2 1179 aa16.03■□□□□ 0.16
HMGCL-208ENST00000509389 DUSP12Q9UNI6 340 aa16.03■□□□□ 0.16
HMGCL-208ENST00000509389 SF3B1O75533 1304 aaKnown RBP eCLIP16.03■□□□□ 0.16
HMGCL-208ENST00000509389 VWA3AA6NCI4 1184 aa16.02■□□□□ 0.16
HMGCL-208ENST00000509389 RECQL4O94761 1208 aa16.02■□□□□ 0.16
HMGCL-208ENST00000509389 LETM1O95202 739 aaPredicted RBP16.02■□□□□ 0.16
HMGCL-208ENST00000509389 GBP2P32456 591 aaPredicted RBP16.02■□□□□ 0.16
HMGCL-208ENST00000509389 CLCN5P51795 746 aa16.02■□□□□ 0.16
HMGCL-208ENST00000509389 CREMQ03060 361 aa16.02■□□□□ 0.16
HMGCL-208ENST00000509389 NAB2Q15742 525 aa16.02■□□□□ 0.16
HMGCL-208ENST00000509389 EEF1DP3Q658K8 133 aa16.02■□□□□ 0.16
HMGCL-208ENST00000509389 HAUS3Q68CZ6 603 aa16.02■□□□□ 0.16
HMGCL-208ENST00000509389 PRSS55Q6UWB4 352 aaPredicted RBP16.02■□□□□ 0.16
HMGCL-208ENST00000509389 DTHD1Q6ZMT9 781 aa16.02■□□□□ 0.16
HMGCL-208ENST00000509389 USP49Q70CQ1 688 aa16.02■□□□□ 0.16
HMGCL-208ENST00000509389 HASPINQ8TF76 798 aa16.02■□□□□ 0.16
HMGCL-208ENST00000509389 STAMQ92783 540 aa16.02■□□□□ 0.16
HMGCL-208ENST00000509389 MYADMQ96S97 322 aa16.02■□□□□ 0.16
HMGCL-208ENST00000509389 ADPGKQ9BRR6 497 aa16.02■□□□□ 0.16
HMGCL-208ENST00000509389 CCSER1Q9C0I3 900 aa16.02■□□□□ 0.16
HMGCL-208ENST00000509389 ZDHHC7Q9NXF8 308 aa16.02■□□□□ 0.16
HMGCL-208ENST00000509389 KCNH3Q9ULD8 1083 aa16.02■□□□□ 0.16
HMGCL-208ENST00000509389 DOCK6Q96HP0 2047 aa16.02■□□□□ 0.16
HMGCL-208ENST00000509389 TRIP11Q15643 1979 aa16.02■□□□□ 0.15
HMGCL-208ENST00000509389 A0A087X0B3 334 aa16.01■□□□□ 0.15
HMGCL-208ENST00000509389 KINO60870 393 aaKnown RBP16.01■□□□□ 0.15
HMGCL-208ENST00000509389 ZNF202O95125 648 aa16.01■□□□□ 0.15
HMGCL-208ENST00000509389 KIF4AO95239 1232 aa16.01■□□□□ 0.15
HMGCL-208ENST00000509389 THP07101 528 aa16.01■□□□□ 0.15
HMGCL-208ENST00000509389 NPR3P17342 541 aa16.01■□□□□ 0.15
HMGCL-208ENST00000509389 CCT6AP40227 531 aaKnown RBP16.01■□□□□ 0.15
HMGCL-208ENST00000509389 SYKP43405 635 aa16.01■□□□□ 0.15
HMGCL-208ENST00000509389 PPP2R5AQ15172 486 aa16.01■□□□□ 0.15
HMGCL-208ENST00000509389 E2F4Q16254 413 aa16.01■□□□□ 0.15
HMGCL-208ENST00000509389 CWF19L1Q69YN2 538 aaKnown RBP16.01■□□□□ 0.15
HMGCL-208ENST00000509389 FLCNQ8NFG4 579 aa16.01■□□□□ 0.15
HMGCL-208ENST00000509389 RSAD2Q8WXG1 361 aa16.01■□□□□ 0.15
HMGCL-208ENST00000509389 KIFC3Q9BVG8 833 aa16.01■□□□□ 0.15
HMGCL-208ENST00000509389 PRKD2Q9BZL6 878 aa16.01■□□□□ 0.15
HMGCL-208ENST00000509389 BHMT2Q9H2M3 363 aa16.01■□□□□ 0.15
HMGCL-208ENST00000509389 PIDD1Q9HB75 910 aa16.01■□□□□ 0.15
HMGCL-208ENST00000509389 FAM13BQ9NYF5 915 aa16.01■□□□□ 0.15
HMGCL-208ENST00000509389 EPS15L1Q9UBC2 864 aa16.01■□□□□ 0.15
HMGCL-208ENST00000509389 LRWD1Q9UFC0 647 aa16.01■□□□□ 0.15
HMGCL-208ENST00000509389 VWA8A3KMH1 1905 aa16.01■□□□□ 0.15
HMGCL-208ENST00000509389 SLC26A4O43511 780 aa16■□□□□ 0.15
HMGCL-208ENST00000509389 ACTN4O43707 911 aaKnown RBP16■□□□□ 0.15
HMGCL-208ENST00000509389 NARSO43776 548 aaKnown RBP16■□□□□ 0.15
HMGCL-208ENST00000509389 PDIA5Q14554 519 aa16■□□□□ 0.15
HMGCL-208ENST00000509389 FAM171A1Q5VUB5 890 aa16■□□□□ 0.15
HMGCL-208ENST00000509389 CEP57Q86XR8 500 aa16■□□□□ 0.15
HMGCL-208ENST00000509389 LNX1Q8TBB1 728 aaPredicted RBP16■□□□□ 0.15
HMGCL-208ENST00000509389 KIFAP3Q92845 792 aa16■□□□□ 0.15
HMGCL-208ENST00000509389 EPSTI1Q96J88 318 aa16■□□□□ 0.15
HMGCL-208ENST00000509389 IFT74Q96LB3 600 aa16■□□□□ 0.15
HMGCL-208ENST00000509389 TTPALQ9BTX7 342 aa16■□□□□ 0.15
HMGCL-208ENST00000509389 USP25Q9UHP3 1055 aa16■□□□□ 0.15
HMGCL-208ENST00000509389 FBXL21Q9UKT6 434 aa16■□□□□ 0.15
HMGCL-208ENST00000509389 KIAA1024Q9UPX6 916 aa16■□□□□ 0.15
HMGCL-208ENST00000509389 GDAQ9Y2T3 454 aa16■□□□□ 0.15
HMGCL-208ENST00000509389 PI15O43692 258 aa16■□□□□ 0.15
HMGCL-208ENST00000509389 GFRA3O60609 400 aa16■□□□□ 0.15
HMGCL-208ENST00000509389 ZMYND10O75800 440 aa16■□□□□ 0.15
HMGCL-208ENST00000509389 EFNA5P52803 228 aa16■□□□□ 0.15
HMGCL-208ENST00000509389 DCAF4L1Q3SXM0 396 aa16■□□□□ 0.15
HMGCL-208ENST00000509389 SPECC1Q5M775 1068 aa16■□□□□ 0.15
HMGCL-208ENST00000509389 NT5DC1Q5TFE4 455 aa16■□□□□ 0.15
HMGCL-208ENST00000509389 LRSAM1Q6UWE0 723 aa16■□□□□ 0.15
HMGCL-208ENST00000509389 KRBA2Q6ZNG9 492 aa16■□□□□ 0.15
HMGCL-208ENST00000509389 SIX5Q8N196 739 aa16■□□□□ 0.15
HMGCL-208ENST00000509389 SLC44A3Q8N4M1 653 aa16■□□□□ 0.15
HMGCL-208ENST00000509389 PIK3R5Q8WYR1 880 aa16■□□□□ 0.15
HMGCL-208ENST00000509389 CLSTN3Q9BQT9 956 aa16■□□□□ 0.15
HMGCL-208ENST00000509389 PYM1Q9BRP8 204 aaKnown RBP16■□□□□ 0.15
HMGCL-208ENST00000509389 MMTAG2Q9BU76 263 aaKnown RBP16■□□□□ 0.15
HMGCL-208ENST00000509389 GZF1Q9H116 711 aaPredicted RBP16■□□□□ 0.15
HMGCL-208ENST00000509389 FBXW11Q9UKB1 542 aa16■□□□□ 0.15
HMGCL-208ENST00000509389 USP34Q70CQ2 3546 aa15.99■□□□□ 0.15
HMGCL-208ENST00000509389 SYCE3A1L190 88 aa15.99■□□□□ 0.15
HMGCL-208ENST00000509389 AOC1P19801 751 aa15.99■□□□□ 0.15
HMGCL-208ENST00000509389 PSMD5Q16401 504 aa15.99■□□□□ 0.15
HMGCL-208ENST00000509389 HYIQ5T013 277 aa15.99■□□□□ 0.15
HMGCL-208ENST00000509389 ATF7IP2Q5U623 682 aa15.99■□□□□ 0.15
HMGCL-208ENST00000509389 SNX29Q8TEQ0 813 aa15.99■□□□□ 0.15
HMGCL-208ENST00000509389 TNMDQ9H2S6 317 aa15.99■□□□□ 0.15
HMGCL-208ENST00000509389 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.99■□□□□ 0.15
HMGCL-208ENST00000509389 PROB1E7EW31 1015 aa15.98■□□□□ 0.15
HMGCL-208ENST00000509389 K7ERI5 159 aa15.98■□□□□ 0.15
HMGCL-208ENST00000509389 ADAM12O43184 909 aa15.98■□□□□ 0.15
HMGCL-208ENST00000509389 CFHP08603 1231 aa15.98■□□□□ 0.15
HMGCL-208ENST00000509389 LAMP2P13473 410 aa15.98■□□□□ 0.15
HMGCL-208ENST00000509389 IGFBP6P24592 240 aaPredicted RBP15.98■□□□□ 0.15
HMGCL-208ENST00000509389 ELAVL2Q12926 359 aaKnown RBP15.98■□□□□ 0.15
HMGCL-208ENST00000509389 GSE1Q14687 1217 aa15.98■□□□□ 0.15
HMGCL-208ENST00000509389 GLRA4Q5JXX5 417 aa15.98■□□□□ 0.15
HMGCL-208ENST00000509389 GET4Q7L5D6 327 aaPredicted RBP15.98■□□□□ 0.15
HMGCL-208ENST00000509389 NXPE3Q969Y0 559 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms