RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 IKZF4Q9H2S9 585 aa17.62■□□□□ 0.41
PDLIM5-212ENST00000509333 MRPL44Q9H9J2 332 aaKnown RBP17.62■□□□□ 0.41
PDLIM5-212ENST00000509333 CNTN3Q9P232 1028 aa17.62■□□□□ 0.41
PDLIM5-212ENST00000509333 HNRNPDLO14979 420 aaKnown RBP17.61■□□□□ 0.41
PDLIM5-212ENST00000509333 OGTO15294 1046 aa17.61■□□□□ 0.41
PDLIM5-212ENST00000509333 B3GAT3O94766 335 aa17.61■□□□□ 0.41
PDLIM5-212ENST00000509333 KIF4AO95239 1232 aa17.61■□□□□ 0.41
PDLIM5-212ENST00000509333 URODP06132 367 aa17.61■□□□□ 0.41
PDLIM5-212ENST00000509333 SRGAP2BP0DMP2 458 aa17.61■□□□□ 0.41
PDLIM5-212ENST00000509333 IDEP14735 1019 aa17.61■□□□□ 0.41
PDLIM5-212ENST00000509333 RPL9P32969 192 aaKnown RBP17.61■□□□□ 0.41
PDLIM5-212ENST00000509333 TNFSF9P41273 254 aa17.61■□□□□ 0.41
PDLIM5-212ENST00000509333 MATR3P43243 847 aaKnown RBP eCLIP17.61■□□□□ 0.412e-6■■■■□ 23.9
PDLIM5-212ENST00000509333 CLCN4P51793 760 aa17.61■□□□□ 0.41
PDLIM5-212ENST00000509333 AMPD3Q01432 767 aa17.61■□□□□ 0.41
PDLIM5-212ENST00000509333 ZP2Q05996 745 aa17.61■□□□□ 0.41
PDLIM5-212ENST00000509333 KYAT1Q16773 422 aa17.61■□□□□ 0.41
PDLIM5-212ENST00000509333 ZBTB41Q5SVQ8 909 aa17.61■□□□□ 0.41
PDLIM5-212ENST00000509333 FAM171A1Q5VUB5 890 aa17.61■□□□□ 0.41
PDLIM5-212ENST00000509333 ADALQ6DHV7 355 aa17.61■□□□□ 0.41
PDLIM5-212ENST00000509333 KANK3Q6NY19 840 aa17.61■□□□□ 0.41
PDLIM5-212ENST00000509333 CNNM4Q6P4Q7 775 aa17.61■□□□□ 0.41
PDLIM5-212ENST00000509333 ADHFE1Q8IWW8 467 aa17.61■□□□□ 0.41
PDLIM5-212ENST00000509333 C18orf25Q96B23 403 aaPredicted RBP17.61■□□□□ 0.41
PDLIM5-212ENST00000509333 UROC1Q96N76 676 aa17.61■□□□□ 0.41
PDLIM5-212ENST00000509333 C7orf25Q9BPX7 421 aa17.61■□□□□ 0.41
PDLIM5-212ENST00000509333 TNMDQ9H2S6 317 aa17.61■□□□□ 0.41
PDLIM5-212ENST00000509333 GOLGA2P5Q9HBQ8 144 aa17.61■□□□□ 0.41
PDLIM5-212ENST00000509333 OLFML3Q9NRN5 406 aa17.61■□□□□ 0.41
PDLIM5-212ENST00000509333 SLC38A7Q9NVC3 462 aa17.61■□□□□ 0.41
PDLIM5-212ENST00000509333 USP15Q9Y4E8 981 aaPredicted RBP17.61■□□□□ 0.41
PDLIM5-212ENST00000509333 PCDHB13Q9Y5F0 798 aa17.61■□□□□ 0.41
PDLIM5-212ENST00000509333 LACTBL1A8MY62 500 aa17.6■□□□□ 0.41
PDLIM5-212ENST00000509333 TISP43B9A030 160 aa17.6■□□□□ 0.41
PDLIM5-212ENST00000509333 TMEM189-UBE2V1I3L0A0 370 aa17.6■□□□□ 0.41
PDLIM5-212ENST00000509333 C1RP00736 705 aa17.6■□□□□ 0.41
PDLIM5-212ENST00000509333 CMA1P23946 247 aa17.6■□□□□ 0.41
PDLIM5-212ENST00000509333 ADSSP30520 456 aa17.6■□□□□ 0.41
PDLIM5-212ENST00000509333 ENOX2Q16206 610 aaKnown RBP17.6■□□□□ 0.41
PDLIM5-212ENST00000509333 RTP2Q5QGT7 225 aa17.6■□□□□ 0.41
PDLIM5-212ENST00000509333 SLFN12LQ6IEE8 588 aa17.6■□□□□ 0.41
PDLIM5-212ENST00000509333 LILRA6Q6PI73 481 aa17.6■□□□□ 0.41
PDLIM5-212ENST00000509333 C12orf76Q8N812 135 aaPredicted RBP17.6■□□□□ 0.41
PDLIM5-212ENST00000509333 LNX1Q8TBB1 728 aaPredicted RBP17.6■□□□□ 0.41
PDLIM5-212ENST00000509333 HASPINQ8TF76 798 aa17.6■□□□□ 0.41
PDLIM5-212ENST00000509333 RIN2Q8WYP3 895 aaPredicted RBP17.6■□□□□ 0.41
PDLIM5-212ENST00000509333 HVCN1Q96D96 273 aa17.6■□□□□ 0.41
PDLIM5-212ENST00000509333 APOL5Q9BWW9 433 aa17.6■□□□□ 0.41
PDLIM5-212ENST00000509333 TRIM9Q9C026 710 aa17.6■□□□□ 0.41
PDLIM5-212ENST00000509333 ADAM7Q9H2U9 754 aa17.6■□□□□ 0.41
PDLIM5-212ENST00000509333 FAM13BQ9NYF5 915 aa17.6■□□□□ 0.41
PDLIM5-212ENST00000509333 FNIP2Q9P278 1114 aa17.6■□□□□ 0.41
PDLIM5-212ENST00000509333 CPSF3Q9UKF6 684 aaKnown RBP17.6■□□□□ 0.41
PDLIM5-212ENST00000509333 KCNH3Q9ULD8 1083 aa17.6■□□□□ 0.41
PDLIM5-212ENST00000509333 MUC3AQ02505 3323 aa17.6■□□□□ 0.41
PDLIM5-212ENST00000509333 CXCL8P10145 99 aa17.59■□□□□ 0.41
PDLIM5-212ENST00000509333 FGFR3P22607 806 aa17.59■□□□□ 0.41
PDLIM5-212ENST00000509333 CASP5P51878 434 aa17.59■□□□□ 0.41
PDLIM5-212ENST00000509333 ELAVL2Q12926 359 aaKnown RBP17.59■□□□□ 0.41
PDLIM5-212ENST00000509333 CCDC65Q8IXS2 484 aa17.59■□□□□ 0.41
PDLIM5-212ENST00000509333 C3orf58Q8NDZ4 430 aa17.59■□□□□ 0.41
PDLIM5-212ENST00000509333 KHSRPQ92945 711 aaKnown RBP eCLIP17.59■□□□□ 0.418e-7■■■■□ 20.3
PDLIM5-212ENST00000509333 FBXL18Q96ME1 805 aa17.59■□□□□ 0.41
PDLIM5-212ENST00000509333 ACCSQ96QU6 501 aa17.59■□□□□ 0.41
PDLIM5-212ENST00000509333 TTPALQ9BTX7 342 aa17.59■□□□□ 0.41
PDLIM5-212ENST00000509333 MSTO1Q9BUK6 570 aa17.59■□□□□ 0.41
PDLIM5-212ENST00000509333 FGFBP2Q9BYJ0 223 aa17.59■□□□□ 0.41
PDLIM5-212ENST00000509333 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.59■□□□□ 0.41
PDLIM5-212ENST00000509333 SF3B1O75533 1304 aaKnown RBP eCLIP17.58■□□□□ 0.43e-6■■■■■ 150.5
PDLIM5-212ENST00000509333 MYBP10242 640 aa17.58■□□□□ 0.4
PDLIM5-212ENST00000509333 RPL17P18621 184 aaKnown RBP17.58■□□□□ 0.4
PDLIM5-212ENST00000509333 KRT85P78386 507 aa17.58■□□□□ 0.4
PDLIM5-212ENST00000509333 ITIH3Q06033 890 aa17.58■□□□□ 0.4
PDLIM5-212ENST00000509333 SPAG1Q07617 926 aa17.58■□□□□ 0.4
PDLIM5-212ENST00000509333 POSTNQ15063 836 aa17.58■□□□□ 0.4
PDLIM5-212ENST00000509333 TPRNQ4KMQ1 711 aa17.58■□□□□ 0.4
PDLIM5-212ENST00000509333 L1TD1Q5T7N2 865 aaKnown RBP17.58■□□□□ 0.4
PDLIM5-212ENST00000509333 PRSS55Q6UWB4 352 aaPredicted RBP17.58■□□□□ 0.4
PDLIM5-212ENST00000509333 CRELD2Q6UXH1 353 aaPredicted RBP17.58■□□□□ 0.4
PDLIM5-212ENST00000509333 CEP57Q86XR8 500 aa17.58■□□□□ 0.4
PDLIM5-212ENST00000509333 PALB2Q86YC2 1186 aa17.58■□□□□ 0.4
PDLIM5-212ENST00000509333 SPATA32Q96LK8 384 aa17.58■□□□□ 0.4
PDLIM5-212ENST00000509333 TSPAN18Q96SJ8 248 aa17.58■□□□□ 0.4
PDLIM5-212ENST00000509333 CLSTN3Q9BQT9 956 aa17.58■□□□□ 0.4
PDLIM5-212ENST00000509333 RPF1Q9H9Y2 349 aaKnown RBP17.58■□□□□ 0.4
PDLIM5-212ENST00000509333 DZANK1Q9NVP4 752 aa17.58■□□□□ 0.4
PDLIM5-212ENST00000509333 ATP6V1DQ9Y5K8 247 aa17.58■□□□□ 0.4
PDLIM5-212ENST00000509333 C5orf42Q9H799 3197 aa17.58■□□□□ 0.4
PDLIM5-212ENST00000509333 MYH15Q9Y2K3 1946 aa17.57■□□□□ 0.4
PDLIM5-212ENST00000509333 PODXLO00592 558 aa17.57■□□□□ 0.4
PDLIM5-212ENST00000509333 PRPF6O94906 941 aaKnown RBP17.57■□□□□ 0.4
PDLIM5-212ENST00000509333 GCNT3O95395 438 aa17.57■□□□□ 0.4
PDLIM5-212ENST00000509333 ADH1AP07327 375 aa17.57■□□□□ 0.4
PDLIM5-212ENST00000509333 BRCC3P46736 316 aa17.57■□□□□ 0.4
PDLIM5-212ENST00000509333 ACOT2P49753 483 aa17.57■□□□□ 0.4
PDLIM5-212ENST00000509333 POU5F1Q01860 360 aaKnown RBP17.57■□□□□ 0.4
PDLIM5-212ENST00000509333 CD302Q8IX05 232 aa17.57■□□□□ 0.4
PDLIM5-212ENST00000509333 TMEM130Q8N3G9 435 aa17.57■□□□□ 0.4
PDLIM5-212ENST00000509333 FEZF2Q8TBJ5 459 aa17.57■□□□□ 0.4
PDLIM5-212ENST00000509333 PIK3R5Q8WYR1 880 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms