RNA–Protein interactions for RNA: ENST00000508499.5

USP46-207, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2 BASIC

Gene USP46, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-207ENST00000508499 SLC35C1Q96A29 364 aa9.38□□□□□ -0.91
USP46-207ENST00000508499 ZNF689Q96CS4 500 aaPredicted RBP9.38□□□□□ -0.91
USP46-207ENST00000508499 SLC9A7Q96T83 725 aa9.38□□□□□ -0.91
USP46-207ENST00000508499 FAM213AQ9BRX8 229 aa9.38□□□□□ -0.91
USP46-207ENST00000508499 PCIF1Q9H4Z3 704 aa9.38□□□□□ -0.91
USP46-207ENST00000508499 RPF1Q9H9Y2 349 aaKnown RBP9.38□□□□□ -0.91
USP46-207ENST00000508499 RSAD1Q9HA92 442 aa9.38□□□□□ -0.91
USP46-207ENST00000508499 SAMSN1Q9NSI8 373 aaKnown RBP9.38□□□□□ -0.91
USP46-207ENST00000508499 FANCLQ9NW38 375 aa9.38□□□□□ -0.91
USP46-207ENST00000508499 SNTG2Q9NY99 539 aa9.38□□□□□ -0.91
USP46-207ENST00000508499 RBAKQ9NYW8 714 aaPredicted RBP9.38□□□□□ -0.91
USP46-207ENST00000508499 LIMA1Q9UHB6 759 aaKnown RBP9.38□□□□□ -0.91
USP46-207ENST00000508499 KCNJ18B7U540 433 aa9.37□□□□□ -0.91
USP46-207ENST00000508499 GOLGA6L19H0YKK7 550 aa9.37□□□□□ -0.91
USP46-207ENST00000508499 DGKIO75912 1065 aa9.37□□□□□ -0.91
USP46-207ENST00000508499 AMHP03971 560 aa9.37□□□□□ -0.91
USP46-207ENST00000508499 KRT13P13646 458 aa9.37□□□□□ -0.91
USP46-207ENST00000508499 TNFSF9P41273 254 aa9.37□□□□□ -0.91
USP46-207ENST00000508499 MATR3P43243 847 aaKnown RBP eCLIP9.37□□□□□ -0.91
USP46-207ENST00000508499 VAMP7P51809 220 aa9.37□□□□□ -0.91
USP46-207ENST00000508499 EPHB4P54760 987 aa9.37□□□□□ -0.91
USP46-207ENST00000508499 HTRA4P83105 476 aaPredicted RBP9.37□□□□□ -0.91
USP46-207ENST00000508499 KCNJ12Q14500 433 aa9.37□□□□□ -0.91
USP46-207ENST00000508499 NAB2Q15742 525 aa9.37□□□□□ -0.91
USP46-207ENST00000508499 MAN2A1Q16706 1144 aa9.37□□□□□ -0.91
USP46-207ENST00000508499 ZBTB41Q5SVQ8 909 aa9.37□□□□□ -0.91
USP46-207ENST00000508499 CEP135Q66GS9 1140 aa9.37□□□□□ -0.91
USP46-207ENST00000508499 SARM1Q6SZW1 724 aa9.37□□□□□ -0.91
USP46-207ENST00000508499 ZNF365Q70YC5 407 aa9.37□□□□□ -0.91
USP46-207ENST00000508499 ZBTB33Q86T24 672 aa9.37□□□□□ -0.91
USP46-207ENST00000508499 LUZP1Q86V48 1076 aa9.37□□□□□ -0.91
USP46-207ENST00000508499 CDR2LQ86X02 465 aaPredicted RBP9.37□□□□□ -0.91
USP46-207ENST00000508499 GAS2L3Q86XJ1 694 aa9.37□□□□□ -0.91
USP46-207ENST00000508499 TMEM192Q8IY95 271 aa9.37□□□□□ -0.91
USP46-207ENST00000508499 THNSL1Q8IYQ7 743 aa9.37□□□□□ -0.91
USP46-207ENST00000508499 ZSWIM2Q8NEG5 633 aa9.37□□□□□ -0.91
USP46-207ENST00000508499 SAAL1Q96ER3 474 aa9.37□□□□□ -0.91
USP46-207ENST00000508499 FAXDC2Q96IV6 333 aa9.37□□□□□ -0.91
USP46-207ENST00000508499 CNOT6LQ96LI5 555 aaKnown RBP9.37□□□□□ -0.91
USP46-207ENST00000508499 PPP1R10Q96QC0 940 aaKnown RBP9.37□□□□□ -0.91
USP46-207ENST00000508499 CGRRF1Q99675 332 aa9.37□□□□□ -0.91
USP46-207ENST00000508499 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.37□□□□□ -0.91
USP46-207ENST00000508499 MRPL9Q9BYD2 267 aaKnown RBP9.37□□□□□ -0.91
USP46-207ENST00000508499 TMEM117Q9H0C3 514 aa9.37□□□□□ -0.91
USP46-207ENST00000508499 RNF19AQ9NV58 838 aa9.37□□□□□ -0.91
USP46-207ENST00000508499 SLC38A7Q9NVC3 462 aa9.37□□□□□ -0.91
USP46-207ENST00000508499 COQ4Q9Y3A0 265 aa9.37□□□□□ -0.91
USP46-207ENST00000508499 PCDHB7Q9Y5E2 793 aa9.37□□□□□ -0.91
USP46-207ENST00000508499 SMIM28A0A1B0GU29 152 aa9.36□□□□□ -0.91
USP46-207ENST00000508499 ARL5CA6NH57 179 aa9.36□□□□□ -0.91
USP46-207ENST00000508499 PTGESO14684 152 aa9.36□□□□□ -0.91
USP46-207ENST00000508499 XPOTO43592 962 aaKnown RBP9.36□□□□□ -0.91
USP46-207ENST00000508499 N4BP1O75113 896 aaKnown RBP9.36□□□□□ -0.91
USP46-207ENST00000508499 OFD1O75665 1012 aa9.36□□□□□ -0.91
USP46-207ENST00000508499 GJB5O95377 273 aa9.36□□□□□ -0.91
USP46-207ENST00000508499 STAU1O95793 577 aaKnown RBP9.36□□□□□ -0.91
USP46-207ENST00000508499 CXCL8P10145 99 aa9.36□□□□□ -0.91
USP46-207ENST00000508499 LRPAP1P30533 357 aa9.36□□□□□ -0.91
USP46-207ENST00000508499 MAGEA10P43363 369 aaPredicted RBP9.36□□□□□ -0.91
USP46-207ENST00000508499 DSC1Q08554 894 aa9.36□□□□□ -0.91
USP46-207ENST00000508499 GRIK3Q13003 919 aa9.36□□□□□ -0.91
USP46-207ENST00000508499 ZACNQ401N2 412 aa9.36□□□□□ -0.91
USP46-207ENST00000508499 MIIPQ5JXC2 388 aa9.36□□□□□ -0.91
USP46-207ENST00000508499 CLLU1OSQ5K130 101 aa9.36□□□□□ -0.91
USP46-207ENST00000508499 C1orf220Q5T0J3 134 aa9.36□□□□□ -0.91
USP46-207ENST00000508499 GLB1LQ6UWU2 654 aa9.36□□□□□ -0.91
USP46-207ENST00000508499 ANKRD20A12PQ8NF67 263 aa9.36□□□□□ -0.91
USP46-207ENST00000508499 KHSRPQ92945 711 aaKnown RBP eCLIP9.36□□□□□ -0.91
USP46-207ENST00000508499 TUBGCP2Q9BSJ2 902 aa9.36□□□□□ -0.91
USP46-207ENST00000508499 PRO3102Q9H379 93 aa9.36□□□□□ -0.91
USP46-207ENST00000508499 FAM124BQ9H5Z6 455 aaPredicted RBP9.36□□□□□ -0.91
USP46-207ENST00000508499 INTS13Q9NVM9 706 aa9.36□□□□□ -0.91
USP46-207ENST00000508499 MAGEC2Q9UBF1 373 aaPredicted RBP9.36□□□□□ -0.91
USP46-207ENST00000508499 ZMYND8Q9ULU4 1186 aaPredicted RBP9.36□□□□□ -0.91
USP46-207ENST00000508499 UBQLN1Q9UMX0 589 aaKnown RBP9.36□□□□□ -0.91
USP46-207ENST00000508499 HES2Q9Y543 173 aa9.36□□□□□ -0.91
USP46-207ENST00000508499 SCN1AP35498 2009 aa9.35□□□□□ -0.91
USP46-207ENST00000508499 A0A1W2PPC1 479 aa9.35□□□□□ -0.91
USP46-207ENST00000508499 FSD2A1L4K1 749 aa9.35□□□□□ -0.91
USP46-207ENST00000508499 GOLGA8IPA6NC78 632 aa9.35□□□□□ -0.91
USP46-207ENST00000508499 GOLGA8JA6NMD2 632 aa9.35□□□□□ -0.91
USP46-207ENST00000508499 LRRIQ3A6PVS8 624 aaPredicted RBP9.35□□□□□ -0.91
USP46-207ENST00000508499 LACTBL1A8MY62 500 aa9.35□□□□□ -0.91
USP46-207ENST00000508499 TMEM189-UBE2V1I3L0A0 370 aa9.35□□□□□ -0.91
USP46-207ENST00000508499 C4BPAP04003 597 aaKnown RBP9.35□□□□□ -0.91
USP46-207ENST00000508499 THP07101 528 aa9.35□□□□□ -0.91
USP46-207ENST00000508499 ACRP10323 421 aa9.35□□□□□ -0.91
USP46-207ENST00000508499 SYN1P17600 705 aa9.35□□□□□ -0.91
USP46-207ENST00000508499 AKAP5P24588 427 aa9.35□□□□□ -0.91
USP46-207ENST00000508499 KCNJ6P48051 423 aa9.35□□□□□ -0.91
USP46-207ENST00000508499 KRT31Q15323 416 aa9.35□□□□□ -0.91
USP46-207ENST00000508499 DUOXA2Q1HG44 320 aa9.35□□□□□ -0.91
USP46-207ENST00000508499 CCDC40Q4G0X9 1142 aa9.35□□□□□ -0.91
USP46-207ENST00000508499 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.35□□□□□ -0.91
USP46-207ENST00000508499 CMTR2Q8IYT2 770 aaKnown RBP9.35□□□□□ -0.91
USP46-207ENST00000508499 CXorf38Q8TB03 319 aa9.35□□□□□ -0.91
USP46-207ENST00000508499 PLEKHO2Q8TD55 490 aa9.35□□□□□ -0.91
USP46-207ENST00000508499 CACTINQ8WUQ7 758 aaKnown RBP9.35□□□□□ -0.91
USP46-207ENST00000508499 UROC1Q96N76 676 aa9.35□□□□□ -0.91
USP46-207ENST00000508499 ZMAT2Q96NC0 199 aaKnown RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms