RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 LRRC4Q9HBW1 653 aa3.16□□□□□ -1.9
NEDD4-208ENST00000508342 ASAH2Q9NR71 780 aa3.16□□□□□ -1.9
NEDD4-208ENST00000508342 OLA1Q9NTK5 396 aaKnown RBP3.16□□□□□ -1.9
NEDD4-208ENST00000508342 DDX19AQ9NUU7 478 aaKnown RBP3.16□□□□□ -1.9
NEDD4-208ENST00000508342 CYP39A1Q9NYL5 469 aa3.16□□□□□ -1.9
NEDD4-208ENST00000508342 UXTQ9UBK9 157 aaPredicted RBP3.16□□□□□ -1.9
NEDD4-208ENST00000508342 DSEQ9UL01 958 aa3.16□□□□□ -1.9
NEDD4-208ENST00000508342 HSF2BPO75031 334 aa3.16□□□□□ -1.9
NEDD4-208ENST00000508342 COBLO75128 1261 aa3.16□□□□□ -1.9
NEDD4-208ENST00000508342 LDHAP00338 332 aaKnown RBP3.16□□□□□ -1.9
NEDD4-208ENST00000508342 CFHP08603 1231 aa3.16□□□□□ -1.9
NEDD4-208ENST00000508342 SDHBP21912 280 aa3.16□□□□□ -1.9
NEDD4-208ENST00000508342 TYRO3Q06418 890 aa3.16□□□□□ -1.9
NEDD4-208ENST00000508342 WASHC5Q12768 1159 aa3.16□□□□□ -1.9
NEDD4-208ENST00000508342 LRMPQ12912 555 aa3.16□□□□□ -1.9
NEDD4-208ENST00000508342 TEAD4Q15561 434 aa3.16□□□□□ -1.9
NEDD4-208ENST00000508342 CCDC6Q16204 474 aa3.16□□□□□ -1.9
NEDD4-208ENST00000508342 ERCC6LQ2NKX8 1250 aa3.16□□□□□ -1.9
NEDD4-208ENST00000508342 MORN1Q5T089 497 aa3.16□□□□□ -1.9
NEDD4-208ENST00000508342 ATF7IP2Q5U623 682 aa3.16□□□□□ -1.9
NEDD4-208ENST00000508342 BSPRYQ5W0U4 402 aa3.16□□□□□ -1.9
NEDD4-208ENST00000508342 PTCRAQ6ISU1 281 aaPredicted RBP3.16□□□□□ -1.9
NEDD4-208ENST00000508342 NELFCDQ8IXH7 590 aa3.16□□□□□ -1.9
NEDD4-208ENST00000508342 SRBD1Q8N5C6 995 aaKnown RBP3.16□□□□□ -1.9
NEDD4-208ENST00000508342 IQUBQ8NA54 791 aa3.16□□□□□ -1.9
NEDD4-208ENST00000508342 MRPS31Q92665 395 aaKnown RBP3.16□□□□□ -1.9
NEDD4-208ENST00000508342 PURBQ96QR8 312 aaKnown RBP3.16□□□□□ -1.9
NEDD4-208ENST00000508342 GTPBP2Q9BX10 602 aaKnown RBP3.16□□□□□ -1.9
NEDD4-208ENST00000508342 TRPV5Q9NQA5 729 aa3.16□□□□□ -1.9
NEDD4-208ENST00000508342 DIS3Q9Y2L1 958 aaKnown RBP3.16□□□□□ -1.9
NEDD4-208ENST00000508342 PCDHA11Q9Y5I1 949 aa3.16□□□□□ -1.9
NEDD4-208ENST00000508342 PSME4Q14997 1843 aa3.16□□□□□ -1.9
NEDD4-208ENST00000508342 TLDC2A0PJX2 215 aa3.16□□□□□ -1.9
NEDD4-208ENST00000508342 MED7O43513 233 aa3.16□□□□□ -1.9
NEDD4-208ENST00000508342 HMBSP08397 361 aa3.16□□□□□ -1.9
NEDD4-208ENST00000508342 GNSP15586 552 aa3.16□□□□□ -1.9
NEDD4-208ENST00000508342 TNFAIP3P21580 790 aa3.16□□□□□ -1.9
NEDD4-208ENST00000508342 HSD3B2P26439 372 aa3.16□□□□□ -1.9
NEDD4-208ENST00000508342 CCDC15Q0P6D6 951 aa3.16□□□□□ -1.9
NEDD4-208ENST00000508342 UAP1Q16222 522 aaPredicted RBP3.16□□□□□ -1.9
NEDD4-208ENST00000508342 USP41Q3LFD5 358 aa3.16□□□□□ -1.9
NEDD4-208ENST00000508342 DGKHQ86XP1 1220 aa3.16□□□□□ -1.9
NEDD4-208ENST00000508342 GPR161Q8N6U8 529 aaKnown RBP3.16□□□□□ -1.9
NEDD4-208ENST00000508342 MCPH1Q8NEM0 835 aa3.16□□□□□ -1.9
NEDD4-208ENST00000508342 RNF217Q8TC41 542 aa3.16□□□□□ -1.9
NEDD4-208ENST00000508342 HAUS1Q96CS2 278 aa3.16□□□□□ -1.9
NEDD4-208ENST00000508342 XPO6Q96QU8 1125 aaKnown RBP3.16□□□□□ -1.9
NEDD4-208ENST00000508342 YIPF2Q9BWQ6 316 aa3.16□□□□□ -1.9
NEDD4-208ENST00000508342 AKAP7Q9P0M2 348 aaPredicted RBP3.16□□□□□ -1.9
NEDD4-208ENST00000508342 SEPT10Q9P0V9 454 aa3.16□□□□□ -1.9
NEDD4-208ENST00000508342 LARSQ9P2J5 1176 aaKnown RBP3.16□□□□□ -1.9
NEDD4-208ENST00000508342 COG5Q9UP83 839 aa3.16□□□□□ -1.9
NEDD4-208ENST00000508342 OTOFQ9HC10 1997 aa3.16□□□□□ -1.9
NEDD4-208ENST00000508342 PER2O15055 1255 aa3.16□□□□□ -1.9
NEDD4-208ENST00000508342 INPPL1O15357 1258 aa3.16□□□□□ -1.9
NEDD4-208ENST00000508342 GAS2O43903 313 aaKnown RBP3.16□□□□□ -1.9
NEDD4-208ENST00000508342 BCRP11274 1271 aa3.16□□□□□ -1.9
NEDD4-208ENST00000508342 PPARGP37231 505 aaPredicted RBP3.16□□□□□ -1.9
NEDD4-208ENST00000508342 AVPR1AP37288 418 aa3.16□□□□□ -1.9
NEDD4-208ENST00000508342 PPP1R2P41236 205 aa3.16□□□□□ -1.9
NEDD4-208ENST00000508342 BPIFB4P59827 614 aa3.16□□□□□ -1.9
NEDD4-208ENST00000508342 MAP7Q14244 749 aa3.16□□□□□ -1.9
NEDD4-208ENST00000508342 KRT81Q14533 505 aa3.16□□□□□ -1.9
NEDD4-208ENST00000508342 TBCCQ15814 346 aa3.16□□□□□ -1.9
NEDD4-208ENST00000508342 INAVAQ3KP66 663 aa3.16□□□□□ -1.9
NEDD4-208ENST00000508342 CCDC122Q5T0U0 273 aa3.16□□□□□ -1.9
NEDD4-208ENST00000508342 RNF168Q8IYW5 571 aaPredicted RBP3.16□□□□□ -1.9
NEDD4-208ENST00000508342 NSUN7Q8NE18 718 aaKnown RBP3.16□□□□□ -1.9
NEDD4-208ENST00000508342 UCMAQ8WVF2 138 aa3.16□□□□□ -1.9
NEDD4-208ENST00000508342 COL4A3BPQ9Y5P4 624 aa3.16□□□□□ -1.9
NEDD4-208ENST00000508342 ZNFX1Q9P2E3 1918 aaKnown RBP3.15□□□□□ -1.9
NEDD4-208ENST00000508342 KLRG2A4D1S0 409 aaPredicted RBP3.15□□□□□ -1.9
NEDD4-208ENST00000508342 PRPF3O43395 683 aaKnown RBP3.15□□□□□ -1.9
NEDD4-208ENST00000508342 THAP12O43422 761 aa3.15□□□□□ -1.9
NEDD4-208ENST00000508342 DEKP35659 375 aaKnown RBP3.15□□□□□ -1.9
NEDD4-208ENST00000508342 SARSP49591 514 aaKnown RBP3.15□□□□□ -1.9
NEDD4-208ENST00000508342 RAD51Q06609 339 aa3.15□□□□□ -1.9
NEDD4-208ENST00000508342 TJAP1Q5JTD0 557 aa3.15□□□□□ -1.9
NEDD4-208ENST00000508342 ZNF618Q5T7W0 954 aa3.15□□□□□ -1.9
NEDD4-208ENST00000508342 PLA2G4FQ68DD2 849 aa3.15□□□□□ -1.9
NEDD4-208ENST00000508342 KIAA1324Q6UXG2 1013 aaKnown RBP3.15□□□□□ -1.9
NEDD4-208ENST00000508342 MAATS1Q7Z4T9 603 aa3.15□□□□□ -1.9
NEDD4-208ENST00000508342 POTEDQ86YR6 584 aa3.15□□□□□ -1.9
NEDD4-208ENST00000508342 PPFIBP2Q8ND30 876 aa3.15□□□□□ -1.9
NEDD4-208ENST00000508342 PHOSPHO2Q8TCD6 241 aa3.15□□□□□ -1.9
NEDD4-208ENST00000508342 ADAMTS19Q8TE59 1207 aa3.15□□□□□ -1.9
NEDD4-208ENST00000508342 IFT81Q8WYA0 676 aa3.15□□□□□ -1.9
NEDD4-208ENST00000508342 ING5Q8WYH8 240 aa3.15□□□□□ -1.9
NEDD4-208ENST00000508342 TMEM206Q9H813 350 aa3.15□□□□□ -1.9
NEDD4-208ENST00000508342 JMJD4Q9H9V9 463 aa3.15□□□□□ -1.9
NEDD4-208ENST00000508342 FAM114A2Q9NRY5 505 aa3.15□□□□□ -1.9
NEDD4-208ENST00000508342 NXF1Q9UBU9 619 aaKnown RBP3.15□□□□□ -1.9
NEDD4-208ENST00000508342 SLC13A4Q9UKG4 626 aa3.15□□□□□ -1.9
NEDD4-208ENST00000508342 ANGPTL3Q9Y5C1 460 aa3.15□□□□□ -1.9
NEDD4-208ENST00000508342 SNX14Q9Y5W7 946 aa3.15□□□□□ -1.9
NEDD4-208ENST00000508342 FAM95CA0A1B0GW59 222 aa3.15□□□□□ -1.9
NEDD4-208ENST00000508342 LAD1O00515 517 aa3.15□□□□□ -1.9
NEDD4-208ENST00000508342 SLC16A4O15374 487 aa3.15□□□□□ -1.9
NEDD4-208ENST00000508342 GADD45BO75293 160 aaPredicted RBP3.15□□□□□ -1.9
NEDD4-208ENST00000508342 TGFB3P10600 412 aa3.15□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms