RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 MEFVO15553 781 aaPredicted RBP14.26□□□□□ -0.13
HMGCS1-205ENST00000508319 GALR2O43603 387 aaPredicted RBP14.26□□□□□ -0.13
HMGCS1-205ENST00000508319 C8AP07357 584 aa14.26□□□□□ -0.13
HMGCS1-205ENST00000508319 MCF2P10911 925 aa14.26□□□□□ -0.13
HMGCS1-205ENST00000508319 SLC12A3P55017 1021 aa14.26□□□□□ -0.13
HMGCS1-205ENST00000508319 OSTNP61366 133 aa14.26□□□□□ -0.13
HMGCS1-205ENST00000508319 TMEM119Q4V9L6 283 aa14.26□□□□□ -0.13
HMGCS1-205ENST00000508319 ARL6IP4Q66PJ3 421 aaKnown RBP14.26□□□□□ -0.13
HMGCS1-205ENST00000508319 ASTLQ6HA08 431 aaPredicted RBP14.26□□□□□ -0.13
HMGCS1-205ENST00000508319 PDXDC1Q6P996 788 aa14.26□□□□□ -0.13
HMGCS1-205ENST00000508319 DCLRE1AQ6PJP8 1040 aa14.26□□□□□ -0.13
HMGCS1-205ENST00000508319 GET4Q7L5D6 327 aaPredicted RBP14.26□□□□□ -0.13
HMGCS1-205ENST00000508319 SYT2Q8N9I0 419 aaPredicted RBP14.26□□□□□ -0.13
HMGCS1-205ENST00000508319 TMEM161BQ8NDZ6 487 aa14.26□□□□□ -0.13
HMGCS1-205ENST00000508319 LRRC15Q8TF66 581 aa14.26□□□□□ -0.13
HMGCS1-205ENST00000508319 SPIRE2Q8WWL2 714 aa14.26□□□□□ -0.13
HMGCS1-205ENST00000508319 RSAD2Q8WXG1 361 aa14.26□□□□□ -0.13
HMGCS1-205ENST00000508319 DDX27Q96GQ7 796 aaKnown RBP14.26□□□□□ -0.13
HMGCS1-205ENST00000508319 ZMAT2Q96NC0 199 aaKnown RBP14.26□□□□□ -0.13
HMGCS1-205ENST00000508319 TBC1D32Q96NH3 1257 aa14.26□□□□□ -0.13
HMGCS1-205ENST00000508319 PLIN2Q99541 437 aa14.26□□□□□ -0.13
HMGCS1-205ENST00000508319 NTPCRQ9BSD7 190 aaKnown RBP14.26□□□□□ -0.13
HMGCS1-205ENST00000508319 CCDC94Q9BW85 323 aaPredicted RBP14.26□□□□□ -0.13
HMGCS1-205ENST00000508319 MTRRQ9UBK8 725 aa14.26□□□□□ -0.13
HMGCS1-205ENST00000508319 CFAP54Q96N23 3096 aa14.26□□□□□ -0.13
HMGCS1-205ENST00000508319 MYH15Q9Y2K3 1946 aa14.25□□□□□ -0.13
HMGCS1-205ENST00000508319 SFI1A8K8P3 1242 aa14.25□□□□□ -0.13
HMGCS1-205ENST00000508319 HNRNPA1P09651 372 aaKnown RBP eCLIP14.25□□□□□ -0.13
HMGCS1-205ENST00000508319 ATXN8OSP0DMR3 200 aa14.25□□□□□ -0.13
HMGCS1-205ENST00000508319 PLS3P13797 630 aa14.25□□□□□ -0.13
HMGCS1-205ENST00000508319 NPR3P17342 541 aa14.25□□□□□ -0.13
HMGCS1-205ENST00000508319 TKTP29401 623 aaKnown RBP14.25□□□□□ -0.13
HMGCS1-205ENST00000508319 HOXA9P31269 272 aa14.25□□□□□ -0.13
HMGCS1-205ENST00000508319 OR1D2P34982 312 aa14.25□□□□□ -0.13
HMGCS1-205ENST00000508319 YARSP54577 528 aaKnown RBP14.25□□□□□ -0.13
HMGCS1-205ENST00000508319 RAB33AQ14088 237 aa14.25□□□□□ -0.13
HMGCS1-205ENST00000508319 NOLC1Q14978 699 aaKnown RBP eCLIP14.25□□□□□ -0.13
HMGCS1-205ENST00000508319 LIN9Q5TKA1 542 aa14.25□□□□□ -0.13
HMGCS1-205ENST00000508319 RSPO2Q6UXX9 243 aaPredicted RBP14.25□□□□□ -0.13
HMGCS1-205ENST00000508319 KCTD17Q8N5Z5 321 aa14.25□□□□□ -0.13
HMGCS1-205ENST00000508319 ZBTB45Q96K62 511 aaPredicted RBP14.25□□□□□ -0.13
HMGCS1-205ENST00000508319 MFSD1Q9H3U5 465 aa14.25□□□□□ -0.13
HMGCS1-205ENST00000508319 UPF2Q9HAU5 1272 aaKnown RBP14.25□□□□□ -0.13
HMGCS1-205ENST00000508319 SLC38A7Q9NVC3 462 aa14.25□□□□□ -0.13
HMGCS1-205ENST00000508319 FAM86C1Q9NVL1 165 aa14.25□□□□□ -0.13
HMGCS1-205ENST00000508319 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.25□□□□□ -0.13
HMGCS1-205ENST00000508319 KCND2Q9NZV8 630 aa14.25□□□□□ -0.13
HMGCS1-205ENST00000508319 CNTN3Q9P232 1028 aa14.25□□□□□ -0.13
HMGCS1-205ENST00000508319 ANKFY1Q9P2R3 1169 aa14.25□□□□□ -0.13
HMGCS1-205ENST00000508319 SMC3Q9UQE7 1217 aa14.25□□□□□ -0.13
HMGCS1-205ENST00000508319 CDY1Q9Y6F8 540 aa14.25□□□□□ -0.13
HMGCS1-205ENST00000508319 NPHP3-ACAD11A0A0J9YXS1 232 aa14.24□□□□□ -0.13
HMGCS1-205ENST00000508319 ANHXE9PGG2 379 aa14.24□□□□□ -0.13
HMGCS1-205ENST00000508319 H0Y858 1186 aa14.24□□□□□ -0.13
HMGCS1-205ENST00000508319 I3L4J1 428 aa14.24□□□□□ -0.13
HMGCS1-205ENST00000508319 PODXLO00592 558 aa14.24□□□□□ -0.13
HMGCS1-205ENST00000508319 TOM1L1O75674 476 aa14.24□□□□□ -0.13
HMGCS1-205ENST00000508319 POU2F2P09086 479 aa14.24□□□□□ -0.13
HMGCS1-205ENST00000508319 PLA2G4BP0C869 781 aa14.24□□□□□ -0.13
HMGCS1-205ENST00000508319 MAPTP10636 758 aaKnown RBP14.24□□□□□ -0.13
HMGCS1-205ENST00000508319 HARSP12081 509 aaKnown RBP14.24□□□□□ -0.13
HMGCS1-205ENST00000508319 LAMP2P13473 410 aa14.24□□□□□ -0.13
HMGCS1-205ENST00000508319 BRCC3P46736 316 aa14.24□□□□□ -0.13
HMGCS1-205ENST00000508319 MCM2P49736 904 aa14.24□□□□□ -0.13
HMGCS1-205ENST00000508319 CLCN5P51795 746 aa14.24□□□□□ -0.13
HMGCS1-205ENST00000508319 NTHL1P78549 312 aa14.24□□□□□ -0.13
HMGCS1-205ENST00000508319 HTR4Q13639 388 aa14.24□□□□□ -0.13
HMGCS1-205ENST00000508319 ARSHQ5FYA8 562 aa14.24□□□□□ -0.13
HMGCS1-205ENST00000508319 PPM1LQ5SGD2 360 aa14.24□□□□□ -0.13
HMGCS1-205ENST00000508319 GRASPQ7Z6J2 395 aaPredicted RBP14.24□□□□□ -0.13
HMGCS1-205ENST00000508319 FLCNQ8NFG4 579 aa14.24□□□□□ -0.13
HMGCS1-205ENST00000508319 SLC7A14Q8TBB6 771 aa14.24□□□□□ -0.13
HMGCS1-205ENST00000508319 CDK5RAP3Q96JB5 506 aa14.24□□□□□ -0.13
HMGCS1-205ENST00000508319 ACAP3Q96P50 834 aa14.24□□□□□ -0.13
HMGCS1-205ENST00000508319 FBXL21Q9UKT6 434 aa14.24□□□□□ -0.13
HMGCS1-205ENST00000508319 BACE2Q9Y5Z0 518 aa14.24□□□□□ -0.13
HMGCS1-205ENST00000508319 RIF1Q5UIP0 2472 aaKnown RBP14.23□□□□□ -0.13
HMGCS1-205ENST00000508319 CCL16O15467 120 aa14.23□□□□□ -0.13
HMGCS1-205ENST00000508319 TRAPPC3O43617 180 aa14.23□□□□□ -0.13
HMGCS1-205ENST00000508319 CFHP08603 1231 aa14.23□□□□□ -0.13
HMGCS1-205ENST00000508319 KCNE1P15382 129 aa14.23□□□□□ -0.13
HMGCS1-205ENST00000508319 AOC1P19801 751 aa14.23□□□□□ -0.13
HMGCS1-205ENST00000508319 FSHRP23945 695 aa14.23□□□□□ -0.13
HMGCS1-205ENST00000508319 SMTNP53814 917 aa14.23□□□□□ -0.13
HMGCS1-205ENST00000508319 STRN3Q13033 797 aa14.23□□□□□ -0.13
HMGCS1-205ENST00000508319 AXDND1Q5T1B0 1012 aaPredicted RBP14.23□□□□□ -0.13
HMGCS1-205ENST00000508319 ANKS3Q6ZW76 656 aa14.23□□□□□ -0.13
HMGCS1-205ENST00000508319 SIX5Q8N196 739 aa14.23□□□□□ -0.13
HMGCS1-205ENST00000508319 SLC44A3Q8N4M1 653 aa14.23□□□□□ -0.13
HMGCS1-205ENST00000508319 ATOH1Q92858 354 aaPredicted RBP14.23□□□□□ -0.13
HMGCS1-205ENST00000508319 KCNN1Q92952 543 aa14.23□□□□□ -0.13
HMGCS1-205ENST00000508319 NXPE3Q969Y0 559 aa14.23□□□□□ -0.13
HMGCS1-205ENST00000508319 C18orf25Q96B23 403 aaPredicted RBP14.23□□□□□ -0.13
HMGCS1-205ENST00000508319 AK8Q96MA6 479 aa14.23□□□□□ -0.13
HMGCS1-205ENST00000508319 TCHPQ9BT92 498 aa14.23□□□□□ -0.13
HMGCS1-205ENST00000508319 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.23□□□□□ -0.13
HMGCS1-205ENST00000508319 NUMBLQ9Y6R0 609 aa14.23□□□□□ -0.13
HMGCS1-205ENST00000508319 WDR87Q6ZQQ6 2873 aa14.23□□□□□ -0.13
HMGCS1-205ENST00000508319 KRBA1A5PL33 1030 aa14.22□□□□□ -0.13
HMGCS1-205ENST00000508319 SLC26A4O43511 780 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms