RNA–Protein interactions for RNA: ENST00000508171.5

LIN54-207, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-207ENST00000508171 MYPNQ86TC9 1320 aa11.68□□□□□ -0.54
LIN54-207ENST00000508171 RGPD3A6NKT7 1758 aaPredicted RBP11.68□□□□□ -0.54
LIN54-207ENST00000508171 RGPD4Q7Z3J3 1758 aa11.68□□□□□ -0.54
LIN54-207ENST00000508171 O00370 1275 aa11.68□□□□□ -0.54
LIN54-207ENST00000508171 FSCN2O14926 492 aa11.68□□□□□ -0.54
LIN54-207ENST00000508171 GARTP22102 1010 aa11.68□□□□□ -0.54
LIN54-207ENST00000508171 PPP1R7Q15435 360 aa11.68□□□□□ -0.54
LIN54-207ENST00000508171 ABHD15Q6UXT9 468 aa11.68□□□□□ -0.54
LIN54-207ENST00000508171 USP37Q86T82 979 aa11.68□□□□□ -0.54
LIN54-207ENST00000508171 HOOK3Q86VS8 718 aa11.68□□□□□ -0.54
LIN54-207ENST00000508171 MICALL2Q8IY33 904 aa11.68□□□□□ -0.54
LIN54-207ENST00000508171 ZNF280CQ8ND82 737 aa11.68□□□□□ -0.54
LIN54-207ENST00000508171 LRRC19Q9H756 370 aa11.68□□□□□ -0.54
LIN54-207ENST00000508171 C1orf112Q9NSG2 853 aa11.68□□□□□ -0.54
LIN54-207ENST00000508171 MTRF1LQ9UGC7 380 aaKnown RBP11.68□□□□□ -0.54
LIN54-207ENST00000508171 RIPK2O43353 540 aa11.67□□□□□ -0.54
LIN54-207ENST00000508171 PAEPP09466 180 aa11.67□□□□□ -0.54
LIN54-207ENST00000508171 CHN1P15882 459 aa11.67□□□□□ -0.54
LIN54-207ENST00000508171 PTPRAP18433 802 aa11.67□□□□□ -0.54
LIN54-207ENST00000508171 ATP4AP20648 1035 aa11.67□□□□□ -0.54
LIN54-207ENST00000508171 LIG4P49917 911 aa11.67□□□□□ -0.54
LIN54-207ENST00000508171 TRIP13Q15645 432 aaPredicted RBP11.67□□□□□ -0.54
LIN54-207ENST00000508171 SGO2Q562F6 1265 aa11.67□□□□□ -0.54
LIN54-207ENST00000508171 ZBTB41Q5SVQ8 909 aa11.67□□□□□ -0.54
LIN54-207ENST00000508171 TDRD10Q5VZ19 366 aaKnown RBP11.67□□□□□ -0.54
LIN54-207ENST00000508171 XRRA1Q6P2D8 792 aa11.67□□□□□ -0.54
LIN54-207ENST00000508171 MICALCLQ6ZW33 695 aa11.67□□□□□ -0.54
LIN54-207ENST00000508171 SPATS2Q86XZ4 545 aaKnown RBP11.67□□□□□ -0.54
LIN54-207ENST00000508171 PASD1Q8IV76 773 aa11.67□□□□□ -0.54
LIN54-207ENST00000508171 MCPH1Q8NEM0 835 aa11.67□□□□□ -0.54
LIN54-207ENST00000508171 PGM2Q96G03 612 aa11.67□□□□□ -0.54
LIN54-207ENST00000508171 IFT74Q96LB3 600 aa11.67□□□□□ -0.54
LIN54-207ENST00000508171 WRNIP1Q96S55 665 aa11.67□□□□□ -0.54
LIN54-207ENST00000508171 TAOK3Q9H2K8 898 aa11.67□□□□□ -0.54
LIN54-207ENST00000508171 ATP6V0A4Q9HBG4 840 aa11.67□□□□□ -0.54
LIN54-207ENST00000508171 A1CFQ9NQ94 594 aaKnown RBP11.67□□□□□ -0.54
LIN54-207ENST00000508171 CYP39A1Q9NYL5 469 aa11.67□□□□□ -0.54
LIN54-207ENST00000508171 PIM2Q9P1W9 311 aa11.67□□□□□ -0.54
LIN54-207ENST00000508171 RGS16O15492 202 aaPredicted RBP11.67□□□□□ -0.54
LIN54-207ENST00000508171 EXTL3O43909 919 aa11.67□□□□□ -0.54
LIN54-207ENST00000508171 PEX10O60683 326 aa11.67□□□□□ -0.54
LIN54-207ENST00000508171 ECEL1O95672 775 aa11.67□□□□□ -0.54
LIN54-207ENST00000508171 HLA-DRAP01903 254 aa11.67□□□□□ -0.54
LIN54-207ENST00000508171 C4BPAP04003 597 aaKnown RBP11.67□□□□□ -0.54
LIN54-207ENST00000508171 RARGP13631 454 aa11.67□□□□□ -0.54
LIN54-207ENST00000508171 DSG3P32926 999 aa11.67□□□□□ -0.54
LIN54-207ENST00000508171 FNTAP49354 379 aa11.67□□□□□ -0.54
LIN54-207ENST00000508171 GMPSP49915 693 aaPredicted RBP11.67□□□□□ -0.54
LIN54-207ENST00000508171 KRT17Q04695 432 aa11.67□□□□□ -0.54
LIN54-207ENST00000508171 SF3A3Q12874 501 aaKnown RBP eCLIP11.67□□□□□ -0.54
LIN54-207ENST00000508171 SEZ6Q53EL9 994 aa11.67□□□□□ -0.54
LIN54-207ENST00000508171 CRELD2Q6UXH1 353 aaPredicted RBP11.67□□□□□ -0.54
LIN54-207ENST00000508171 SEC16BQ96JE7 1060 aa11.67□□□□□ -0.54
LIN54-207ENST00000508171 PASKQ96RG2 1323 aa11.67□□□□□ -0.54
LIN54-207ENST00000508171 FNBP1Q96RU3 617 aa11.67□□□□□ -0.54
LIN54-207ENST00000508171 FAM118BQ9BPY3 351 aa11.67□□□□□ -0.54
LIN54-207ENST00000508171 SELENOSQ9BQE4 189 aa11.67□□□□□ -0.54
LIN54-207ENST00000508171 DDX23Q9BUQ8 820 aaKnown RBP11.67□□□□□ -0.54
LIN54-207ENST00000508171 HEMGNQ9BXL5 484 aa11.67□□□□□ -0.54
LIN54-207ENST00000508171 ZNF541Q9H0D2 1346 aa11.67□□□□□ -0.54
LIN54-207ENST00000508171 PARP2Q9UGN5 583 aa11.67□□□□□ -0.54
LIN54-207ENST00000508171 CNOT7Q9UIV1 285 aaKnown RBP11.67□□□□□ -0.54
LIN54-207ENST00000508171 PCDHB2Q9Y5E7 798 aa11.67□□□□□ -0.54
LIN54-207ENST00000508171 GJA3Q9Y6H8 435 aa11.67□□□□□ -0.54
LIN54-207ENST00000508171 ATXN2Q99700 1313 aaKnown RBP11.66□□□□□ -0.54
LIN54-207ENST00000508171 VNN1O95497 513 aa11.66□□□□□ -0.54
LIN54-207ENST00000508171 FDX1P10109 184 aa11.66□□□□□ -0.54
LIN54-207ENST00000508171 SPRED3Q2MJR0 410 aa11.66□□□□□ -0.54
LIN54-207ENST00000508171 ZACNQ401N2 412 aa11.66□□□□□ -0.54
LIN54-207ENST00000508171 CCDC38Q502W7 563 aa11.66□□□□□ -0.54
LIN54-207ENST00000508171 ERMARDQ5T6L9 678 aa11.66□□□□□ -0.54
LIN54-207ENST00000508171 YTHDF3Q7Z739 585 aaKnown RBP11.66□□□□□ -0.54
LIN54-207ENST00000508171 DEFB132Q7Z7B7 95 aa11.66□□□□□ -0.54
LIN54-207ENST00000508171 SCYL3Q8IZE3 742 aa11.66□□□□□ -0.54
LIN54-207ENST00000508171 C12orf50Q8NA57 414 aaPredicted RBP11.66□□□□□ -0.54
LIN54-207ENST00000508171 XPO6Q96QU8 1125 aaKnown RBP11.66□□□□□ -0.54
LIN54-207ENST00000508171 AAASQ9NRG9 546 aa11.66□□□□□ -0.54
LIN54-207ENST00000508171 AGO2Q9UKV8 859 aaKnown RBP11.66□□□□□ -0.54
LIN54-207ENST00000508171 R3HDM2Q9Y2K5 976 aaKnown RBP11.66□□□□□ -0.54
LIN54-207ENST00000508171 PHIPQ8WWQ0 1821 aa11.66□□□□□ -0.54
LIN54-207ENST00000508171 SPATA31C2B4DYI2 1134 aa11.66□□□□□ -0.54
LIN54-207ENST00000508171 MMP13P45452 471 aa11.66□□□□□ -0.54
LIN54-207ENST00000508171 POLGP54098 1239 aaPredicted RBP11.66□□□□□ -0.54
LIN54-207ENST00000508171 CLDN10P78369 228 aa11.66□□□□□ -0.54
LIN54-207ENST00000508171 EMC2Q15006 297 aa11.66□□□□□ -0.54
LIN54-207ENST00000508171 WDR44Q5JSH3 913 aa11.66□□□□□ -0.54
LIN54-207ENST00000508171 ENOSF1Q7L5Y1 443 aa11.66□□□□□ -0.54
LIN54-207ENST00000508171 CPLX4Q7Z7G2 160 aa11.66□□□□□ -0.54
LIN54-207ENST00000508171 PWWP2AQ96N64 755 aa11.66□□□□□ -0.54
LIN54-207ENST00000508171 MTFR1LQ9H019 292 aa11.66□□□□□ -0.54
LIN54-207ENST00000508171 APOBEC3GQ9HC16 384 aaKnown RBP11.66□□□□□ -0.54
LIN54-207ENST00000508171 DNAJC17Q9NVM6 304 aaKnown RBP11.66□□□□□ -0.54
LIN54-207ENST00000508171 ADAMTS5Q9UNA0 930 aa11.66□□□□□ -0.54
LIN54-207ENST00000508171 DOCK1Q14185 1865 aa11.66□□□□□ -0.54
LIN54-207ENST00000508171 NFKBIEO00221 500 aa11.65□□□□□ -0.54
LIN54-207ENST00000508171 GJB6O95452 261 aa11.65□□□□□ -0.54
LIN54-207ENST00000508171 ACSL3O95573 720 aa11.65□□□□□ -0.54
LIN54-207ENST00000508171 EDN1P05305 212 aa11.65□□□□□ -0.54
LIN54-207ENST00000508171 ACO1P21399 889 aaKnown RBP11.65□□□□□ -0.54
LIN54-207ENST00000508171 IVDP26440 423 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms