RNA–Protein interactions for RNA: ENST00000508167.5

PROM1-207, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-207ENST00000508167 LZTFL1Q9NQ48 299 aa11.9□□□□□ -0.5
PROM1-207ENST00000508167 GOLGA6L9A6NEM1 432 aa11.89□□□□□ -0.51
PROM1-207ENST00000508167 KRT19P08727 400 aa11.89□□□□□ -0.51
PROM1-207ENST00000508167 GARTP22102 1010 aa11.89□□□□□ -0.51
PROM1-207ENST00000508167 ZBED6P86452 979 aa11.89□□□□□ -0.51
PROM1-207ENST00000508167 CBWD2Q8IUF1 395 aa11.89□□□□□ -0.51
PROM1-207ENST00000508167 CEP120Q8N960 986 aa11.89□□□□□ -0.51
PROM1-207ENST00000508167 CDT1Q9H211 546 aa11.89□□□□□ -0.51
PROM1-207ENST00000508167 ANKZF1Q9H8Y5 726 aa11.89□□□□□ -0.51
PROM1-207ENST00000508167 FHOD1Q9Y613 1164 aa11.89□□□□□ -0.51
PROM1-207ENST00000508167 DUSP10Q9Y6W6 482 aa11.89□□□□□ -0.51
PROM1-207ENST00000508167 CNTNAP2Q9UHC6 1331 aa11.89□□□□□ -0.51
PROM1-207ENST00000508167 PARNO95453 639 aaKnown RBP11.89□□□□□ -0.51
PROM1-207ENST00000508167 AKAP5P24588 427 aa11.89□□□□□ -0.51
PROM1-207ENST00000508167 SNRPFP62306 86 aaKnown RBP11.89□□□□□ -0.51
PROM1-207ENST00000508167 RNASELQ05823 741 aaKnown RBP11.89□□□□□ -0.51
PROM1-207ENST00000508167 MAN2A1Q16706 1144 aa11.89□□□□□ -0.51
PROM1-207ENST00000508167 SPOUT1Q5T280 376 aaKnown RBP11.89□□□□□ -0.51
PROM1-207ENST00000508167 OTOP2Q7RTS6 562 aa11.89□□□□□ -0.51
PROM1-207ENST00000508167 PPFIBP1Q86W92 1011 aa11.89□□□□□ -0.51
PROM1-207ENST00000508167 TMEM174Q8WUU8 243 aa11.89□□□□□ -0.51
PROM1-207ENST00000508167 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.89□□□□□ -0.51
PROM1-207ENST00000508167 SNTG2Q9NY99 539 aa11.89□□□□□ -0.51
PROM1-207ENST00000508167 EXTL3O43909 919 aa11.89□□□□□ -0.51
PROM1-207ENST00000508167 TMEM191BP0C7N4 346 aa11.89□□□□□ -0.51
PROM1-207ENST00000508167 STAG3L1P0CL83 205 aa11.89□□□□□ -0.51
PROM1-207ENST00000508167 SLC35F6Q8N357 371 aa11.89□□□□□ -0.51
PROM1-207ENST00000508167 CEP63Q96MT8 703 aa11.89□□□□□ -0.51
PROM1-207ENST00000508167 PDZD7Q9H5P4 517 aa11.89□□□□□ -0.51
PROM1-207ENST00000508167 MCF2P10911 925 aa11.89□□□□□ -0.51
PROM1-207ENST00000508167 PPP2R3AQ06190 1150 aa11.89□□□□□ -0.51
PROM1-207ENST00000508167 LMBRD2Q68DH5 695 aaPredicted RBP11.89□□□□□ -0.51
PROM1-207ENST00000508167 RPAINQ86UA6 219 aa11.89□□□□□ -0.51
PROM1-207ENST00000508167 PGBD4Q96DM1 585 aa11.89□□□□□ -0.51
PROM1-207ENST00000508167 CARD6Q9BX69 1037 aa11.89□□□□□ -0.51
PROM1-207ENST00000508167 FTHL17Q9BXU8 183 aa11.89□□□□□ -0.51
PROM1-207ENST00000508167 EIF2AQ9BY44 585 aaKnown RBP11.89□□□□□ -0.51
PROM1-207ENST00000508167 PCDHB7Q9Y5E2 793 aa11.89□□□□□ -0.51
PROM1-207ENST00000508167 PCDHB2Q9Y5E7 798 aa11.89□□□□□ -0.51
PROM1-207ENST00000508167 EPN1Q9Y6I3 576 aaPredicted RBP11.89□□□□□ -0.51
PROM1-207ENST00000508167 A0A1B0GUA9 196 aa11.88□□□□□ -0.51
PROM1-207ENST00000508167 EIF3CLB5ME19 914 aaKnown RBP11.88□□□□□ -0.51
PROM1-207ENST00000508167 KIAA0391O15091 583 aaKnown RBP11.88□□□□□ -0.51
PROM1-207ENST00000508167 TIMP1P01033 207 aa11.88□□□□□ -0.51
PROM1-207ENST00000508167 CLTAP09496 248 aa11.88□□□□□ -0.51
PROM1-207ENST00000508167 TRAPPC11Q7Z392 1133 aa11.88□□□□□ -0.51
PROM1-207ENST00000508167 BADQ92934 168 aa11.88□□□□□ -0.51
PROM1-207ENST00000508167 FAM193BQ96PV7 902 aaPredicted RBP11.88□□□□□ -0.51
PROM1-207ENST00000508167 EIF3CQ99613 913 aaKnown RBP11.88□□□□□ -0.51
PROM1-207ENST00000508167 FAM105AQ9NUU6 356 aa11.88□□□□□ -0.51
PROM1-207ENST00000508167 RNF19AQ9NV58 838 aa11.88□□□□□ -0.51
PROM1-207ENST00000508167 GNG11P61952 73 aa11.88□□□□□ -0.51
PROM1-207ENST00000508167 GLRA4Q5JXX5 417 aa11.88□□□□□ -0.51
PROM1-207ENST00000508167 INTS8Q75QN2 995 aaKnown RBP11.88□□□□□ -0.51
PROM1-207ENST00000508167 CCDC113Q9H0I3 377 aa11.88□□□□□ -0.51
PROM1-207ENST00000508167 MTIF3Q9H2K0 278 aaKnown RBP11.88□□□□□ -0.51
PROM1-207ENST00000508167 NXF3Q9H4D5 531 aaKnown RBP11.88□□□□□ -0.51
PROM1-207ENST00000508167 NHEJ1Q9H9Q4 299 aaPredicted RBP11.88□□□□□ -0.51
PROM1-207ENST00000508167 PDE11AQ9HCR9 933 aa11.88□□□□□ -0.51
PROM1-207ENST00000508167 CHST12Q9NRB3 414 aa11.88□□□□□ -0.51
PROM1-207ENST00000508167 TBX21Q9UL17 535 aa11.88□□□□□ -0.51
PROM1-207ENST00000508167 MYH10P35580 1976 aa11.88□□□□□ -0.51
PROM1-207ENST00000508167 AKAP3O75969 853 aa11.88□□□□□ -0.51
PROM1-207ENST00000508167 TRIM49P0CI25 452 aa11.88□□□□□ -0.51
PROM1-207ENST00000508167 TRIM49CP0CI26 452 aa11.88□□□□□ -0.51
PROM1-207ENST00000508167 CXCL8P10145 99 aa11.88□□□□□ -0.51
PROM1-207ENST00000508167 TRPC3Q13507 836 aa11.88□□□□□ -0.51
PROM1-207ENST00000508167 NFIL3Q16649 462 aa11.88□□□□□ -0.51
PROM1-207ENST00000508167 TRIM71Q2Q1W2 868 aaKnown RBP11.88□□□□□ -0.51
PROM1-207ENST00000508167 MTERF4Q7Z6M4 381 aaKnown RBP11.88□□□□□ -0.51
PROM1-207ENST00000508167 IFNLR1Q8IU57 520 aaPredicted RBP11.88□□□□□ -0.51
PROM1-207ENST00000508167 PDCL2Q8N4E4 241 aa11.88□□□□□ -0.51
PROM1-207ENST00000508167 LPPQ93052 612 aa11.88□□□□□ -0.51
PROM1-207ENST00000508167 EFCAB8A8MWE9 144 aa11.87□□□□□ -0.51
PROM1-207ENST00000508167 TNNC2P02585 160 aa11.87□□□□□ -0.51
PROM1-207ENST00000508167 SKIP12755 728 aa11.87□□□□□ -0.51
PROM1-207ENST00000508167 VAMP7P51809 220 aa11.87□□□□□ -0.51
PROM1-207ENST00000508167 FPGSQ05932 587 aa11.87□□□□□ -0.51
PROM1-207ENST00000508167 MAPK8IP2Q13387 824 aaPredicted RBP11.87□□□□□ -0.51
PROM1-207ENST00000508167 PPIGQ13427 754 aaKnown RBP eCLIP11.87□□□□□ -0.51
PROM1-207ENST00000508167 KYAT1Q16773 422 aa11.87□□□□□ -0.51
PROM1-207ENST00000508167 FAM187BQ17R55 369 aa11.87□□□□□ -0.51
PROM1-207ENST00000508167 C1orf53Q5VUE5 145 aa11.87□□□□□ -0.51
PROM1-207ENST00000508167 GLB1LQ6UWU2 654 aa11.87□□□□□ -0.51
PROM1-207ENST00000508167 A0A0B4J269 797 aa11.87□□□□□ -0.51
PROM1-207ENST00000508167 TRIM43BA6NCK2 446 aa11.87□□□□□ -0.51
PROM1-207ENST00000508167 NBNO60934 754 aa11.87□□□□□ -0.51
PROM1-207ENST00000508167 TNFSF9P41273 254 aa11.87□□□□□ -0.51
PROM1-207ENST00000508167 CLCN6P51797 869 aa11.87□□□□□ -0.51
PROM1-207ENST00000508167 TRIM43Q96BQ3 446 aaPredicted RBP11.87□□□□□ -0.51
PROM1-207ENST00000508167 KIF12Q96FN5 646 aa11.87□□□□□ -0.51
PROM1-207ENST00000508167 OSBPL7Q9BZF2 842 aa11.87□□□□□ -0.51
PROM1-207ENST00000508167 IMPG2Q9BZV3 1241 aa11.87□□□□□ -0.51
PROM1-207ENST00000508167 SASH3O75995 380 aa11.87□□□□□ -0.51
PROM1-207ENST00000508167 ADSSP30520 456 aa11.87□□□□□ -0.51
PROM1-207ENST00000508167 RAB27AP51159 221 aa11.87□□□□□ -0.51
PROM1-207ENST00000508167 PAPD7Q5XG87 772 aaKnown RBP11.87□□□□□ -0.51
PROM1-207ENST00000508167 MFSD5Q6N075 450 aa11.87□□□□□ -0.51
PROM1-207ENST00000508167 GPR88Q9GZN0 384 aa11.87□□□□□ -0.51
PROM1-207ENST00000508167 ERVK-5Q9HDB9 667 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms