RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 GLG1Q92896 1179 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 GJA10Q969M2 543 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 MKL1Q969V6 931 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 SAAL1Q96ER3 474 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 ACSBG1Q96GR2 724 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 RBM17Q96I25 401 aaKnown RBP5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 FAXDC2Q96IV6 333 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 CFAP57Q96MR6 1250 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 TTC25Q96NG3 672 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 TGS1Q96RS0 853 aaKnown RBP5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 SH3GL3Q99963 347 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 EIF2AK1Q9BQI3 630 aaKnown RBP5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 TIPINQ9BVW5 301 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 WDR11Q9BZH6 1224 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 THAP2Q9H0W7 228 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 BHMT2Q9H2M3 363 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 KANSL2Q9H9L4 492 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 HMX1Q9NP08 348 aaPredicted RBP5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 KCNK9Q9NPC2 374 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 AGPAT3Q9NRZ7 376 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 ABCF3Q9NUQ8 709 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 FGFR1OP2Q9NVK5 253 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 DMAC2Q9NW81 257 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 NYAP2Q9P242 653 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 PRKAG3Q9UGI9 489 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 ASIC3Q9UHC3 531 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 GTF3C4Q9UKN8 822 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 CDV3Q9UKY7 258 aaKnown RBP5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 SYNPO2Q9UMS6 1093 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 SMG5Q9UPR3 1016 aaKnown RBP5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 JAG2Q9Y219 1238 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 STARD13Q9Y3M8 1113 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 GPSM3Q9Y4H4 160 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 MAP4K5Q9Y4K4 846 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 PCDHA3Q9Y5H8 950 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 CD2APQ9Y5K6 639 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 USH1CQ9Y6N9 552 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 COL5A3P25940 1745 aaPredicted RBP5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 COL24A1Q17RW2 1714 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 XIRP1Q702N8 1843 aaKnown RBP5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 ZNF536O15090 1300 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 KAT6BQ8WYB5 2073 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 COL4A1P02462 1669 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 A0A1W2PRG0 241 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 FAM47DPA6NHR8 397 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 TMEM110-MUSTN1A8MSY1 372 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 USP17L15C9J2P7 530 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 USP17L13C9JLJ4 530 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 USP17L11C9JVI0 530 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 USP17L18D6R9N7 530 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 USP17L22D6RA61 530 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 USP17L17D6RBQ6 530 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 USP17L19D6RCP7 530 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 USP17L20D6RJB6 530 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 PIK3CDO00329 1044 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 MPHOSPH10O00566 681 aaKnown RBP5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 ATP2A1O14983 1001 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 CLIC2O15247 247 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 MAGEB2O15479 319 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 TGFB1I1O43294 461 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 DIAPH2O60879 1101 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 PPP1R11O60927 126 aaPredicted RBP5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 UNC5CO95185 931 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 ZWINTO95229 277 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 NEFHP12036 1026 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 BRAFP15056 766 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 IBSPP21815 317 aaPredicted RBP5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 COMTP21964 271 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 PAX7P23759 505 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 RFC4P35249 363 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 STAT3P40763 770 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 GRM5P41594 1212 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 SLCO1A2P46721 670 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 CASP4P49662 377 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 PEX5P50542 639 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 CYP2J2P51589 502 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 SARNPP82979 210 aaKnown RBP5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 ENPEPQ07075 957 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 USP17L24Q0WX57 530 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 PTP4A2Q12974 167 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 GRIK3Q13003 919 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 PPP2R5CQ13362 524 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 ZNF211Q13398 564 aaPredicted RBP5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 BLMHQ13867 455 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 SPARCL1Q14515 664 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 MESDQ14696 234 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 TNIP1Q15025 636 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 RBBP5Q15291 538 aaKnown RBP5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 TAF11Q15544 211 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 PTPROQ16827 1216 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 SGO2Q562F6 1265 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 ODR4Q5SWX8 454 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 FYB2Q5VWT5 728 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 SLFN13Q68D06 897 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 GJB7Q6PEY0 223 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 USP17L6PQ6QN14 398 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 C1orf186Q6ZWK4 172 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 ZNF365Q70YC5 407 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 ENOSF1Q7L5Y1 443 aa5.29□□□□□ -1.56
HMGB3P16-201ENST00000508037 ZNF720Q7Z2F6 126 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms