RNA–Protein interactions for RNA: ENST00000507395.1

SFXN1-207, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 527 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-207ENST00000507395 RSPO2Q6UXX9 243 aaPredicted RBP19.36■□□□□ 0.69
SFXN1-207ENST00000507395 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.36■□□□□ 0.69
SFXN1-207ENST00000507395 CCDC149Q6ZUS6 474 aa19.36■□□□□ 0.69
SFXN1-207ENST00000507395 RAD54LQ92698 747 aa19.36■□□□□ 0.69
SFXN1-207ENST00000507395 PBXIP1Q96AQ6 731 aa19.36■□□□□ 0.69
SFXN1-207ENST00000507395 FAM122AQ96E09 287 aa19.36■□□□□ 0.69
SFXN1-207ENST00000507395 CALML4Q96GE6 196 aa19.36■□□□□ 0.69
SFXN1-207ENST00000507395 EPSTI1Q96J88 318 aa19.36■□□□□ 0.69
SFXN1-207ENST00000507395 UROC1Q96N76 676 aa19.36■□□□□ 0.69
SFXN1-207ENST00000507395 ACAP3Q96P50 834 aa19.36■□□□□ 0.69
SFXN1-207ENST00000507395 TOPORSQ9NS56 1045 aaPredicted RBP19.36■□□□□ 0.69
SFXN1-207ENST00000507395 ZDHHC7Q9NXF8 308 aa19.36■□□□□ 0.69
SFXN1-207ENST00000507395 LARSQ9P2J5 1176 aaKnown RBP19.36■□□□□ 0.69
SFXN1-207ENST00000507395 FBXO2Q9UK22 296 aaPredicted RBP19.36■□□□□ 0.69
SFXN1-207ENST00000507395 FBXW11Q9UKB1 542 aa19.36■□□□□ 0.69
SFXN1-207ENST00000507395 MTMR6Q9Y217 621 aa19.36■□□□□ 0.69
SFXN1-207ENST00000507395 FAM189A1O60320 539 aa19.35■□□□□ 0.69
SFXN1-207ENST00000507395 ZMYND10O75800 440 aa19.35■□□□□ 0.69
SFXN1-207ENST00000507395 B3GAT3O94766 335 aa19.35■□□□□ 0.69
SFXN1-207ENST00000507395 PSMD5Q16401 504 aa19.35■□□□□ 0.69
SFXN1-207ENST00000507395 SEZ6Q53EL9 994 aa19.35■□□□□ 0.69
SFXN1-207ENST00000507395 HAUS6Q7Z4H7 955 aa19.35■□□□□ 0.69
SFXN1-207ENST00000507395 GPBP1Q86WP2 473 aa19.35■□□□□ 0.69
SFXN1-207ENST00000507395 CEP57Q86XR8 500 aa19.35■□□□□ 0.69
SFXN1-207ENST00000507395 PRKD2Q9BZL6 878 aa19.35■□□□□ 0.69
SFXN1-207ENST00000507395 KCNH6Q9H252 994 aa19.35■□□□□ 0.69
SFXN1-207ENST00000507395 MUC6Q6W4X9 2439 aa19.35■□□□□ 0.69
SFXN1-207ENST00000507395 PDGFBP01127 241 aaPredicted RBP19.34■□□□□ 0.69
SFXN1-207ENST00000507395 PIGRP01833 764 aa19.34■□□□□ 0.69
SFXN1-207ENST00000507395 BRCC3P46736 316 aa19.34■□□□□ 0.69
SFXN1-207ENST00000507395 YARSP54577 528 aaKnown RBP19.34■□□□□ 0.69
SFXN1-207ENST00000507395 STRN3Q13033 797 aa19.34■□□□□ 0.69
SFXN1-207ENST00000507395 MTMR3Q13615 1198 aa19.34■□□□□ 0.69
SFXN1-207ENST00000507395 NOLC1Q14978 699 aaKnown RBP eCLIP19.34■□□□□ 0.69
SFXN1-207ENST00000507395 OTOP3Q7RTS5 596 aa19.34■□□□□ 0.69
SFXN1-207ENST00000507395 UBALD2Q8IYN6 164 aa19.34■□□□□ 0.69
SFXN1-207ENST00000507395 FBXL6Q8N531 539 aa19.34■□□□□ 0.69
SFXN1-207ENST00000507395 C18orf25Q96B23 403 aaPredicted RBP19.34■□□□□ 0.69
SFXN1-207ENST00000507395 DDX27Q96GQ7 796 aaKnown RBP19.34■□□□□ 0.69
SFXN1-207ENST00000507395 TCHPQ9BT92 498 aa19.34■□□□□ 0.69
SFXN1-207ENST00000507395 MTRRQ9UBK8 725 aa19.34■□□□□ 0.69
SFXN1-207ENST00000507395 SRPRBQ9Y5M8 271 aaKnown RBP19.34■□□□□ 0.69
SFXN1-207ENST00000507395 MORC2Q9Y6X9 1032 aaPredicted RBP19.34■□□□□ 0.69
SFXN1-207ENST00000507395 CLUHO75153 1309 aa19.33■□□□□ 0.69
SFXN1-207ENST00000507395 DOCK8Q8NF50 2099 aa19.33■□□□□ 0.69
SFXN1-207ENST00000507395 SPDYE4A6NLX3 237 aa19.33■□□□□ 0.68
SFXN1-207ENST00000507395 I3L4J1 428 aa19.33■□□□□ 0.68
SFXN1-207ENST00000507395 HARSP12081 509 aaKnown RBP19.33■□□□□ 0.68
SFXN1-207ENST00000507395 TKTP29401 623 aaKnown RBP19.33■□□□□ 0.68
SFXN1-207ENST00000507395 DDIT3P35638 169 aa19.33■□□□□ 0.68
SFXN1-207ENST00000507395 RAB33AQ14088 237 aa19.33■□□□□ 0.68
SFXN1-207ENST00000507395 DHX8Q14562 1220 aaKnown RBP19.33■□□□□ 0.68
SFXN1-207ENST00000507395 SPECC1Q5M775 1068 aa19.33■□□□□ 0.68
SFXN1-207ENST00000507395 IER5LQ5T953 404 aa19.33■□□□□ 0.68
SFXN1-207ENST00000507395 TMEM130Q8N3G9 435 aa19.33■□□□□ 0.68
SFXN1-207ENST00000507395 SMG7Q92540 1137 aaKnown RBP19.33■□□□□ 0.68
SFXN1-207ENST00000507395 LARP4BQ92615 738 aaKnown RBP19.33■□□□□ 0.68
SFXN1-207ENST00000507395 ACSF2Q96CM8 615 aaPredicted RBP19.33■□□□□ 0.68
SFXN1-207ENST00000507395 ANKFY1Q9P2R3 1169 aa19.33■□□□□ 0.68
SFXN1-207ENST00000507395 BACE2Q9Y5Z0 518 aa19.33■□□□□ 0.68
SFXN1-207ENST00000507395 K7ELQ4 463 aaPredicted RBP19.32■□□□□ 0.68
SFXN1-207ENST00000507395 PODXLO00592 558 aa19.32■□□□□ 0.68
SFXN1-207ENST00000507395 CLDN3O15551 220 aa19.32■□□□□ 0.68
SFXN1-207ENST00000507395 TBC1D4O60343 1298 aa19.32■□□□□ 0.68
SFXN1-207ENST00000507395 ADRB2P07550 413 aa19.32■□□□□ 0.68
SFXN1-207ENST00000507395 MARCKSP29966 332 aaPredicted RBP19.32■□□□□ 0.68
SFXN1-207ENST00000507395 MRPL58Q14197 206 aaKnown RBP19.32■□□□□ 0.68
SFXN1-207ENST00000507395 ZBTB6Q15916 424 aa19.32■□□□□ 0.68
SFXN1-207ENST00000507395 SLC39A4Q6P5W5 647 aa19.32■□□□□ 0.68
SFXN1-207ENST00000507395 PDXDC1Q6P996 788 aa19.32■□□□□ 0.68
SFXN1-207ENST00000507395 ELMSAN1Q6PJG2 1045 aa19.32■□□□□ 0.68
SFXN1-207ENST00000507395 CLIC6Q96NY7 704 aa19.32■□□□□ 0.68
SFXN1-207ENST00000507395 MYADMQ96S97 322 aa19.32■□□□□ 0.68
SFXN1-207ENST00000507395 KCNK12Q9HB15 430 aa19.32■□□□□ 0.68
SFXN1-207ENST00000507395 PARVGQ9HBI0 331 aa19.32■□□□□ 0.68
SFXN1-207ENST00000507395 SLC38A7Q9NVC3 462 aa19.32■□□□□ 0.68
SFXN1-207ENST00000507395 EPS15L1Q9UBC2 864 aa19.32■□□□□ 0.68
SFXN1-207ENST00000507395 TBX20Q9UMR3 447 aa19.32■□□□□ 0.68
SFXN1-207ENST00000507395 DOCK6Q96HP0 2047 aa19.32■□□□□ 0.68
SFXN1-207ENST00000507395 TTC26A0AVF1 554 aa19.31■□□□□ 0.68
SFXN1-207ENST00000507395 H0YCG3 227 aa19.31■□□□□ 0.68
SFXN1-207ENST00000507395 TRAK2O60296 914 aa19.31■□□□□ 0.68
SFXN1-207ENST00000507395 HOXD11P31277 338 aaPredicted RBP19.31■□□□□ 0.68
SFXN1-207ENST00000507395 OR1D2P34982 312 aa19.31■□□□□ 0.68
SFXN1-207ENST00000507395 TNFSF9P41273 254 aa19.31■□□□□ 0.68
SFXN1-207ENST00000507395 VCPP55072 806 aaKnown RBP19.31■□□□□ 0.68
SFXN1-207ENST00000507395 GTF2BQ00403 316 aa19.31■□□□□ 0.68
SFXN1-207ENST00000507395 ZBTB41Q5SVQ8 909 aa19.31■□□□□ 0.68
SFXN1-207ENST00000507395 MYCT1Q8N699 235 aa19.31■□□□□ 0.68
SFXN1-207ENST00000507395 PRSS33Q8NF86 280 aa19.31■□□□□ 0.68
SFXN1-207ENST00000507395 USP28Q96RU2 1077 aa19.31■□□□□ 0.68
SFXN1-207ENST00000507395 NOTCH4Q99466 2003 aa19.3■□□□□ 0.68
SFXN1-207ENST00000507395 CXCL8P10145 99 aa19.3■□□□□ 0.68
SFXN1-207ENST00000507395 SCP2P22307 547 aa19.3■□□□□ 0.68
SFXN1-207ENST00000507395 NMT1P30419 496 aaKnown RBP19.3■□□□□ 0.68
SFXN1-207ENST00000507395 HOXA9P31269 272 aa19.3■□□□□ 0.68
SFXN1-207ENST00000507395 RPL9P32969 192 aaKnown RBP19.3■□□□□ 0.68
SFXN1-207ENST00000507395 SNX21Q969T3 373 aa19.3■□□□□ 0.68
SFXN1-207ENST00000507395 ST6GALNAC4Q9H4F1 302 aa19.3■□□□□ 0.68
SFXN1-207ENST00000507395 PLEKHA5Q9HAU0 1116 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms