RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 USP41Q3LFD5 358 aa18.16■□□□□ 0.5
SNCA-209ENST00000506244 PUS10Q3MIT2 529 aaKnown RBP18.16■□□□□ 0.5
SNCA-209ENST00000506244 SEZ6Q53EL9 994 aa18.16■□□□□ 0.5
SNCA-209ENST00000506244 TJAP1Q5JTD0 557 aa18.16■□□□□ 0.5
SNCA-209ENST00000506244 GPR65Q8IYL9 337 aa18.16■□□□□ 0.5
SNCA-209ENST00000506244 RNF168Q8IYW5 571 aaPredicted RBP18.16■□□□□ 0.5
SNCA-209ENST00000506244 ASB2Q96Q27 587 aa18.16■□□□□ 0.5
SNCA-209ENST00000506244 VN1R3Q9BXE9 311 aa18.16■□□□□ 0.5
SNCA-209ENST00000506244 FGFBP2Q9BYJ0 223 aa18.16■□□□□ 0.5
SNCA-209ENST00000506244 CPSF3Q9UKF6 684 aaKnown RBP18.16■□□□□ 0.5
SNCA-209ENST00000506244 FAM50BQ9Y247 325 aa18.16■□□□□ 0.5
SNCA-209ENST00000506244 PRUNE2Q8WUY3 3088 aa18.15■□□□□ 0.5
SNCA-209ENST00000506244 BRWD1Q9NSI6 2320 aa18.15■□□□□ 0.5
SNCA-209ENST00000506244 HIDE1A8MVS5 230 aa18.15■□□□□ 0.5
SNCA-209ENST00000506244 TISP43B9A030 160 aa18.15■□□□□ 0.5
SNCA-209ENST00000506244 TRAPPC3O43617 180 aa18.15■□□□□ 0.5
SNCA-209ENST00000506244 CYP3A5P20815 502 aa18.15■□□□□ 0.5
SNCA-209ENST00000506244 CASP1P29466 404 aa18.15■□□□□ 0.5
SNCA-209ENST00000506244 RPL9P32969 192 aaKnown RBP18.15■□□□□ 0.5
SNCA-209ENST00000506244 TNFSF9P41273 254 aa18.15■□□□□ 0.5
SNCA-209ENST00000506244 SNRPFP62306 86 aaKnown RBP18.15■□□□□ 0.5
SNCA-209ENST00000506244 FAM160A1Q05DH4 1040 aa18.15■□□□□ 0.5
SNCA-209ENST00000506244 PSMD2Q13200 908 aa18.15■□□□□ 0.5
SNCA-209ENST00000506244 ENOX2Q16206 610 aaKnown RBP18.15■□□□□ 0.5
SNCA-209ENST00000506244 LEXMQ3ZCV2 418 aa18.15■□□□□ 0.5
SNCA-209ENST00000506244 ARMCX5Q6P1M9 558 aa18.15■□□□□ 0.5
SNCA-209ENST00000506244 DCLRE1AQ6PJP8 1040 aa18.15■□□□□ 0.5
SNCA-209ENST00000506244 EPM2AIP1Q7L775 607 aaPredicted RBP18.15■□□□□ 0.5
SNCA-209ENST00000506244 HS2ST1Q7LGA3 356 aa18.15■□□□□ 0.5
SNCA-209ENST00000506244 PPFIBP1Q86W92 1011 aa18.15■□□□□ 0.5
SNCA-209ENST00000506244 HPS3Q969F9 1004 aa18.15■□□□□ 0.5
SNCA-209ENST00000506244 KIF12Q96FN5 646 aa18.15■□□□□ 0.5
SNCA-209ENST00000506244 ZMAT2Q96NC0 199 aaKnown RBP18.15■□□□□ 0.5
SNCA-209ENST00000506244 CXCL16Q9H2A7 254 aa18.15■□□□□ 0.5
SNCA-209ENST00000506244 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.15■□□□□ 0.5
SNCA-209ENST00000506244 UBQLN1Q9UMX0 589 aaKnown RBP18.15■□□□□ 0.5
SNCA-209ENST00000506244 DERAQ9Y315 318 aa18.15■□□□□ 0.5
SNCA-209ENST00000506244 TRIP11Q15643 1979 aa18.15■□□□□ 0.5
SNCA-209ENST00000506244 PODXLO00592 558 aa18.14■□□□□ 0.49
SNCA-209ENST00000506244 B3GAT3O94766 335 aa18.14■□□□□ 0.49
SNCA-209ENST00000506244 IL18RAPO95256 599 aa18.14■□□□□ 0.49
SNCA-209ENST00000506244 ADRB2P07550 413 aa18.14■□□□□ 0.49
SNCA-209ENST00000506244 ADSSP30520 456 aa18.14■□□□□ 0.49
SNCA-209ENST00000506244 CLCNKBP51801 687 aa18.14■□□□□ 0.49
SNCA-209ENST00000506244 DSG1Q02413 1049 aa18.14■□□□□ 0.49
SNCA-209ENST00000506244 TFF2Q03403 129 aa18.14■□□□□ 0.49
SNCA-209ENST00000506244 ADAM15Q13444 863 aa18.14■□□□□ 0.49
SNCA-209ENST00000506244 UPP1Q16831 310 aa18.14■□□□□ 0.49
SNCA-209ENST00000506244 BMT2Q1RMZ1 405 aa18.14■□□□□ 0.49
SNCA-209ENST00000506244 ZBTB41Q5SVQ8 909 aa18.14■□□□□ 0.49
SNCA-209ENST00000506244 PDXDC1Q6P996 788 aa18.14■□□□□ 0.49
SNCA-209ENST00000506244 ZNF507Q8TCN5 953 aa18.14■□□□□ 0.49
SNCA-209ENST00000506244 CASP10Q92851 521 aa18.14■□□□□ 0.49
SNCA-209ENST00000506244 PAAF1Q9BRP4 392 aa18.14■□□□□ 0.49
SNCA-209ENST00000506244 ASB7Q9H672 318 aa18.14■□□□□ 0.49
SNCA-209ENST00000506244 GOLGA2P5Q9HBQ8 144 aa18.14■□□□□ 0.49
SNCA-209ENST00000506244 CGNQ9P2M7 1197 aaKnown RBP18.14■□□□□ 0.49
SNCA-209ENST00000506244 CACNG4Q9UBN1 327 aa18.14■□□□□ 0.49
SNCA-209ENST00000506244 HOOK1Q9UJC3 728 aaKnown RBP18.14■□□□□ 0.49
SNCA-209ENST00000506244 SPTBN5Q9NRC6 3674 aaKnown RBP18.14■□□□□ 0.49
SNCA-209ENST00000506244 LACTBL1A8MY62 500 aa18.13■□□□□ 0.49
SNCA-209ENST00000506244 F8W810 466 aa18.13■□□□□ 0.49
SNCA-209ENST00000506244 PER2O15055 1255 aa18.13■□□□□ 0.49
SNCA-209ENST00000506244 KLRC4O43908 158 aa18.13■□□□□ 0.49
SNCA-209ENST00000506244 TBX10O75333 385 aa18.13■□□□□ 0.49
SNCA-209ENST00000506244 KIF20AO95235 890 aa18.13■□□□□ 0.49
SNCA-209ENST00000506244 EFEMP2O95967 443 aa18.13■□□□□ 0.49
SNCA-209ENST00000506244 RPN1P04843 607 aaKnown RBP18.13■□□□□ 0.49
SNCA-209ENST00000506244 ADH1AP07327 375 aa18.13■□□□□ 0.49
SNCA-209ENST00000506244 GTF2F1P35269 517 aaKnown RBP eCLIP18.13■□□□□ 0.49
SNCA-209ENST00000506244 ACOT2P49753 483 aa18.13■□□□□ 0.49
SNCA-209ENST00000506244 KMT5BQ4FZB7 885 aa18.13■□□□□ 0.49
SNCA-209ENST00000506244 ELMSAN1Q6PJG2 1045 aa18.13■□□□□ 0.49
SNCA-209ENST00000506244 NT5DC4Q86YG4 428 aa18.13■□□□□ 0.49
SNCA-209ENST00000506244 FMR1NBQ8N0W7 255 aaPredicted RBP18.13■□□□□ 0.49
SNCA-209ENST00000506244 GLIS3Q8NEA6 775 aa18.13■□□□□ 0.49
SNCA-209ENST00000506244 BEST2Q8NFU1 509 aa18.13■□□□□ 0.49
SNCA-209ENST00000506244 GOLGA5Q8TBA6 731 aa18.13■□□□□ 0.49
SNCA-209ENST00000506244 HASPINQ8TF76 798 aa18.13■□□□□ 0.49
SNCA-209ENST00000506244 AUTS2Q8WXX7 1259 aa18.13■□□□□ 0.49
SNCA-209ENST00000506244 FAM212AQ96EL1 285 aa18.13■□□□□ 0.49
SNCA-209ENST00000506244 GPR62Q9BZJ7 368 aa18.13■□□□□ 0.49
SNCA-209ENST00000506244 SLC39A2Q9NP94 309 aa18.13■□□□□ 0.49
SNCA-209ENST00000506244 CHST7Q9NS84 486 aa18.13■□□□□ 0.49
SNCA-209ENST00000506244 C2CD2Q9Y426 696 aa18.13■□□□□ 0.49
SNCA-209ENST00000506244 C2CD2LO14523 706 aa18.12■□□□□ 0.49
SNCA-209ENST00000506244 LINC01565O15544 149 aa18.12■□□□□ 0.49
SNCA-209ENST00000506244 MEFVO15553 781 aaPredicted RBP18.12■□□□□ 0.49
SNCA-209ENST00000506244 EXTL3O43909 919 aa18.12■□□□□ 0.49
SNCA-209ENST00000506244 SOX4Q06945 474 aaPredicted RBP18.12■□□□□ 0.49
SNCA-209ENST00000506244 TMEM132DQ14C87 1099 aa18.12■□□□□ 0.49
SNCA-209ENST00000506244 TMEM184AQ6ZMB5 413 aa18.12■□□□□ 0.49
SNCA-209ENST00000506244 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.12■□□□□ 0.49
SNCA-209ENST00000506244 BRSK2Q8IWQ3 736 aa18.12■□□□□ 0.49
SNCA-209ENST00000506244 GPD1LQ8N335 351 aa18.12■□□□□ 0.49
SNCA-209ENST00000506244 SCFD1Q8WVM8 642 aa18.12■□□□□ 0.49
SNCA-209ENST00000506244 RABGGTAQ92696 567 aa18.12■□□□□ 0.49
SNCA-209ENST00000506244 C18orf25Q96B23 403 aaPredicted RBP18.12■□□□□ 0.49
SNCA-209ENST00000506244 FAM213AQ9BRX8 229 aa18.12■□□□□ 0.49
SNCA-209ENST00000506244 TTPALQ9BTX7 342 aa18.12■□□□□ 0.49
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