RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 TKTP29401 623 aaKnown RBP18.33■□□□□ 0.52
PDLIM7-215ENST00000506161 MTHFRP42898 656 aa18.33■□□□□ 0.52
PDLIM7-215ENST00000506161 ZNF131P52739 623 aa18.33■□□□□ 0.52
PDLIM7-215ENST00000506161 SPAG1Q07617 926 aa18.33■□□□□ 0.52
PDLIM7-215ENST00000506161 PTPN21Q16825 1174 aa18.33■□□□□ 0.52
PDLIM7-215ENST00000506161 UPP1Q16831 310 aa18.33■□□□□ 0.52
PDLIM7-215ENST00000506161 HAUS6Q7Z4H7 955 aa18.33■□□□□ 0.52
PDLIM7-215ENST00000506161 PIK3R5Q8WYR1 880 aa18.33■□□□□ 0.52
PDLIM7-215ENST00000506161 ASIC4Q96FT7 647 aa18.33■□□□□ 0.52
PDLIM7-215ENST00000506161 RIPOR3Q96MK2 946 aa18.33■□□□□ 0.52
PDLIM7-215ENST00000506161 CCSER1Q9C0I3 900 aa18.33■□□□□ 0.52
PDLIM7-215ENST00000506161 FNIP2Q9P278 1114 aa18.33■□□□□ 0.52
PDLIM7-215ENST00000506161 CCDC195A0A1B0GUA6 201 aa18.32■□□□□ 0.52
PDLIM7-215ENST00000506161 FAM189A1O60320 539 aa18.32■□□□□ 0.52
PDLIM7-215ENST00000506161 GLUD1P00367 558 aa18.32■□□□□ 0.52
PDLIM7-215ENST00000506161 NMT1P30419 496 aaKnown RBP18.32■□□□□ 0.52
PDLIM7-215ENST00000506161 ATAT1Q5SQI0 421 aa18.32■□□□□ 0.52
PDLIM7-215ENST00000506161 KCTD17Q8N5Z5 321 aa18.32■□□□□ 0.52
PDLIM7-215ENST00000506161 LARP4BQ92615 738 aaKnown RBP18.32■□□□□ 0.52
PDLIM7-215ENST00000506161 CALML4Q96GE6 196 aa18.32■□□□□ 0.52
PDLIM7-215ENST00000506161 NECTIN4Q96NY8 510 aa18.32■□□□□ 0.52
PDLIM7-215ENST00000506161 CCDC94Q9BW85 323 aaPredicted RBP18.32■□□□□ 0.52
PDLIM7-215ENST00000506161 CNTN3Q9P232 1028 aa18.32■□□□□ 0.52
PDLIM7-215ENST00000506161 STK39Q9UEW8 545 aa18.32■□□□□ 0.52
PDLIM7-215ENST00000506161 TUBGCP4Q9UGJ1 667 aa18.32■□□□□ 0.52
PDLIM7-215ENST00000506161 ZDBF2Q9HCK1 2354 aa18.32■□□□□ 0.52
PDLIM7-215ENST00000506161 SCN1AP35498 2009 aa18.32■□□□□ 0.52
PDLIM7-215ENST00000506161 TMEM189-UBE2V1I3L0A0 370 aa18.31■□□□□ 0.52
PDLIM7-215ENST00000506161 TOM1L1O75674 476 aa18.31■□□□□ 0.52
PDLIM7-215ENST00000506161 PAPLNO95428 1278 aa18.31■□□□□ 0.52
PDLIM7-215ENST00000506161 BMP15O95972 392 aa18.31■□□□□ 0.52
PDLIM7-215ENST00000506161 CXCL8P10145 99 aa18.31■□□□□ 0.52
PDLIM7-215ENST00000506161 FGFR3P22607 806 aa18.31■□□□□ 0.52
PDLIM7-215ENST00000506161 MCL1Q07820 350 aa18.31■□□□□ 0.52
PDLIM7-215ENST00000506161 SIGLEC14Q08ET2 396 aa18.31■□□□□ 0.52
PDLIM7-215ENST00000506161 NOLC1Q14978 699 aaKnown RBP eCLIP18.31■□□□□ 0.52
PDLIM7-215ENST00000506161 PSMD5Q16401 504 aa18.31■□□□□ 0.52
PDLIM7-215ENST00000506161 ZC2HC1CQ53FD0 456 aaPredicted RBP18.31■□□□□ 0.52
PDLIM7-215ENST00000506161 ST13P5Q8NFI4 369 aaPredicted RBP18.31■□□□□ 0.52
PDLIM7-215ENST00000506161 DDX27Q96GQ7 796 aaKnown RBP18.31■□□□□ 0.52
PDLIM7-215ENST00000506161 TCHPQ9BT92 498 aa18.31■□□□□ 0.52
PDLIM7-215ENST00000506161 TTPALQ9BTX7 342 aa18.31■□□□□ 0.52
PDLIM7-215ENST00000506161 KCND2Q9NZV8 630 aa18.31■□□□□ 0.52
PDLIM7-215ENST00000506161 LIMD1Q9UGP4 676 aa18.31■□□□□ 0.52
PDLIM7-215ENST00000506161 ODF2LQ9ULJ1 636 aa18.31■□□□□ 0.52
PDLIM7-215ENST00000506161 SRPRBQ9Y5M8 271 aaKnown RBP18.31■□□□□ 0.52
PDLIM7-215ENST00000506161 COL4A3Q01955 1670 aa18.31■□□□□ 0.52
PDLIM7-215ENST00000506161 K7ENM7 598 aa18.3■□□□□ 0.52
PDLIM7-215ENST00000506161 SLC26A4O43511 780 aa18.3■□□□□ 0.52
PDLIM7-215ENST00000506161 STX6O43752 255 aa18.3■□□□□ 0.52
PDLIM7-215ENST00000506161 B3GAT3O94766 335 aa18.3■□□□□ 0.52
PDLIM7-215ENST00000506161 KCNE1P15382 129 aa18.3■□□□□ 0.52
PDLIM7-215ENST00000506161 PDCP20941 246 aa18.3■□□□□ 0.52
PDLIM7-215ENST00000506161 GUCY2FP51841 1108 aa18.3■□□□□ 0.52
PDLIM7-215ENST00000506161 VCPP55072 806 aaKnown RBP18.3■□□□□ 0.52
PDLIM7-215ENST00000506161 FOXD4L5Q5VV16 416 aaPredicted RBP18.3■□□□□ 0.52
PDLIM7-215ENST00000506161 ZPBP2Q6X784 338 aa18.3■□□□□ 0.52
PDLIM7-215ENST00000506161 GPR65Q8IYL9 337 aa18.3■□□□□ 0.52
PDLIM7-215ENST00000506161 MYCT1Q8N699 235 aa18.3■□□□□ 0.52
PDLIM7-215ENST00000506161 KREMEN2Q8NCW0 462 aa18.3■□□□□ 0.52
PDLIM7-215ENST00000506161 CMASQ8NFW8 434 aaPredicted RBP18.3■□□□□ 0.52
PDLIM7-215ENST00000506161 FOXD4L4Q8WXT5 416 aaPredicted RBP18.3■□□□□ 0.52
PDLIM7-215ENST00000506161 KCNN1Q92952 543 aa18.3■□□□□ 0.52
PDLIM7-215ENST00000506161 ACAP3Q96P50 834 aa18.3■□□□□ 0.52
PDLIM7-215ENST00000506161 FGFBP2Q9BYJ0 223 aa18.3■□□□□ 0.52
PDLIM7-215ENST00000506161 FBXW11Q9UKB1 542 aa18.3■□□□□ 0.52
PDLIM7-215ENST00000506161 TBX20Q9UMR3 447 aa18.3■□□□□ 0.52
PDLIM7-215ENST00000506161 SSX2IPQ9Y2D8 614 aa18.3■□□□□ 0.52
PDLIM7-215ENST00000506161 GTF3C3Q9Y5Q9 886 aa18.3■□□□□ 0.52
PDLIM7-215ENST00000506161 ZFHX2Q9C0A1 2572 aaPredicted RBP18.3■□□□□ 0.52
PDLIM7-215ENST00000506161 TCHHQ07283 1943 aa18.29■□□□□ 0.52
PDLIM7-215ENST00000506161 MYMKA6NI61 221 aa18.29■□□□□ 0.52
PDLIM7-215ENST00000506161 SPDYE4A6NLX3 237 aa18.29■□□□□ 0.52
PDLIM7-215ENST00000506161 ANKRD63C9JTQ0 380 aa18.29■□□□□ 0.52
PDLIM7-215ENST00000506161 PODXLO00592 558 aa18.29■□□□□ 0.52
PDLIM7-215ENST00000506161 FAM13AO94988 1023 aa18.29■□□□□ 0.52
PDLIM7-215ENST00000506161 AVPR2P30518 371 aa18.29■□□□□ 0.52
PDLIM7-215ENST00000506161 NTHL1P78549 312 aa18.29■□□□□ 0.52
PDLIM7-215ENST00000506161 STRN3Q13033 797 aa18.29■□□□□ 0.52
PDLIM7-215ENST00000506161 PKP1Q13835 747 aa18.29■□□□□ 0.52
PDLIM7-215ENST00000506161 DCLRE1AQ6PJP8 1040 aa18.29■□□□□ 0.52
PDLIM7-215ENST00000506161 C15orf39Q6ZRI6 1047 aa18.29■□□□□ 0.52
PDLIM7-215ENST00000506161 DYMQ7RTS9 669 aa18.29■□□□□ 0.52
PDLIM7-215ENST00000506161 TDRD5Q8NAT2 981 aaKnown RBP18.29■□□□□ 0.52
PDLIM7-215ENST00000506161 SNX21Q969T3 373 aa18.29■□□□□ 0.52
PDLIM7-215ENST00000506161 DNAJC19Q96DA6 116 aa18.29■□□□□ 0.52
PDLIM7-215ENST00000506161 MYADMQ96S97 322 aa18.29■□□□□ 0.52
PDLIM7-215ENST00000506161 PANK2Q9BZ23 570 aa18.29■□□□□ 0.52
PDLIM7-215ENST00000506161 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.29■□□□□ 0.52
PDLIM7-215ENST00000506161 LARSQ9P2J5 1176 aaKnown RBP18.29■□□□□ 0.52
PDLIM7-215ENST00000506161 MTRRQ9UBK8 725 aa18.29■□□□□ 0.52
PDLIM7-215ENST00000506161 NR2E1Q9Y466 385 aa18.29■□□□□ 0.52
PDLIM7-215ENST00000506161 PPEF2O14830 753 aa18.28■□□□□ 0.52
PDLIM7-215ENST00000506161 TRAK2O60296 914 aa18.28■□□□□ 0.52
PDLIM7-215ENST00000506161 PIGRP01833 764 aa18.28■□□□□ 0.52
PDLIM7-215ENST00000506161 DDIT3P35638 169 aa18.28■□□□□ 0.52
PDLIM7-215ENST00000506161 SMTNP53814 917 aa18.28■□□□□ 0.52
PDLIM7-215ENST00000506161 YARSP54577 528 aaKnown RBP18.28■□□□□ 0.52
PDLIM7-215ENST00000506161 SLC39A14Q15043 492 aa18.28■□□□□ 0.52
PDLIM7-215ENST00000506161 POTEHQ6S545 545 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms