RNA–Protein interactions for RNA: ENST00000505945.1

SIL1-208, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene SIL1, Length 250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-208ENST00000505945 E9PMD0 336 aa12.49□□□□□ -0.41
SIL1-208ENST00000505945 TMEM189-UBE2V1I3L0A0 370 aa12.49□□□□□ -0.41
SIL1-208ENST00000505945 XYLBO75191 536 aa12.49□□□□□ -0.41
SIL1-208ENST00000505945 TKTP29401 623 aaKnown RBP12.49□□□□□ -0.41
SIL1-208ENST00000505945 CDC25AP30304 524 aa12.49□□□□□ -0.41
SIL1-208ENST00000505945 HOXA9P31269 272 aa12.49□□□□□ -0.41
SIL1-208ENST00000505945 BRCC3P46736 316 aa12.49□□□□□ -0.41
SIL1-208ENST00000505945 NPTX2P47972 431 aa12.49□□□□□ -0.41
SIL1-208ENST00000505945 HMGN5P82970 282 aaKnown RBP12.49□□□□□ -0.41
SIL1-208ENST00000505945 SOX4Q06945 474 aaPredicted RBP12.49□□□□□ -0.41
SIL1-208ENST00000505945 APBB1IPQ7Z5R6 666 aaPredicted RBP12.49□□□□□ -0.41
SIL1-208ENST00000505945 DAW1Q8N136 415 aa12.49□□□□□ -0.41
SIL1-208ENST00000505945 IGSF22Q8N9C0 903 aa12.49□□□□□ -0.41
SIL1-208ENST00000505945 C3orf58Q8NDZ4 430 aa12.49□□□□□ -0.41
SIL1-208ENST00000505945 SNX27Q96L92 541 aa12.49□□□□□ -0.41
SIL1-208ENST00000505945 ZSCAN31Q96LW9 406 aaPredicted RBP12.49□□□□□ -0.41
SIL1-208ENST00000505945 UROC1Q96N76 676 aa12.49□□□□□ -0.41
SIL1-208ENST00000505945 ACO2Q99798 780 aaKnown RBP12.49□□□□□ -0.41
SIL1-208ENST00000505945 CCDC94Q9BW85 323 aaPredicted RBP12.49□□□□□ -0.41
SIL1-208ENST00000505945 FOXQ1Q9C009 403 aa12.49□□□□□ -0.41
SIL1-208ENST00000505945 CDT1Q9H211 546 aa12.49□□□□□ -0.41
SIL1-208ENST00000505945 DNMT3BQ9UBC3 853 aaKnown RBP12.49□□□□□ -0.41
SIL1-208ENST00000505945 DNM3Q9UQ16 869 aa12.49□□□□□ -0.41
SIL1-208ENST00000505945 ZNF292O60281 2723 aa12.49□□□□□ -0.41
SIL1-208ENST00000505945 CACNA1IQ9P0X4 2223 aa12.48□□□□□ -0.41
SIL1-208ENST00000505945 TRAPPC3O43617 180 aa12.48□□□□□ -0.41
SIL1-208ENST00000505945 HIP1RO75146 1068 aa12.48□□□□□ -0.41
SIL1-208ENST00000505945 U2AF2P26368 475 aaKnown RBP eCLIP12.48□□□□□ -0.41
SIL1-208ENST00000505945 GRM5P41594 1212 aa12.48□□□□□ -0.41
SIL1-208ENST00000505945 YARSP54577 528 aaKnown RBP12.48□□□□□ -0.41
SIL1-208ENST00000505945 SNW1Q13573 536 aaKnown RBP12.48□□□□□ -0.41
SIL1-208ENST00000505945 IL17AQ16552 155 aa12.48□□□□□ -0.41
SIL1-208ENST00000505945 UVSSAQ2YD98 709 aa12.48□□□□□ -0.41
SIL1-208ENST00000505945 ZNF568Q3ZCX4 644 aa12.48□□□□□ -0.41
SIL1-208ENST00000505945 PABPC1LQ4VXU2 614 aaKnown RBP12.48□□□□□ -0.41
SIL1-208ENST00000505945 ALKAL1Q6UXT8 129 aa12.48□□□□□ -0.41
SIL1-208ENST00000505945 ANKS3Q6ZW76 656 aa12.48□□□□□ -0.41
SIL1-208ENST00000505945 KCNG4Q8TDN1 519 aa12.48□□□□□ -0.41
SIL1-208ENST00000505945 ING5Q8WYH8 240 aa12.48□□□□□ -0.41
SIL1-208ENST00000505945 DDX27Q96GQ7 796 aaKnown RBP12.48□□□□□ -0.41
SIL1-208ENST00000505945 ZMAT2Q96NC0 199 aaKnown RBP12.48□□□□□ -0.41
SIL1-208ENST00000505945 TCHPQ9BT92 498 aa12.48□□□□□ -0.41
SIL1-208ENST00000505945 TARS2Q9BW92 718 aaKnown RBP12.48□□□□□ -0.41
SIL1-208ENST00000505945 RAB34Q9BZG1 259 aa12.48□□□□□ -0.41
SIL1-208ENST00000505945 PTPRHQ9HD43 1115 aa12.48□□□□□ -0.41
SIL1-208ENST00000505945 KMT5AQ9NQR1 393 aa12.48□□□□□ -0.41
SIL1-208ENST00000505945 DLGAP2Q9P1A6 1054 aa12.48□□□□□ -0.41
SIL1-208ENST00000505945 BACE2Q9Y5Z0 518 aa12.48□□□□□ -0.41
SIL1-208ENST00000505945 R4GN57 208 aa12.48□□□□□ -0.41
SIL1-208ENST00000505945 NOTCH4Q99466 2003 aa12.47□□□□□ -0.41
SIL1-208ENST00000505945 SFI1A8K8P3 1242 aa12.47□□□□□ -0.41
SIL1-208ENST00000505945 LRRN2O75325 713 aa12.47□□□□□ -0.41
SIL1-208ENST00000505945 GLULP15104 373 aa12.47□□□□□ -0.41
SIL1-208ENST00000505945 STARD6P59095 220 aa12.47□□□□□ -0.41
SIL1-208ENST00000505945 MAPK7Q13164 816 aa12.47□□□□□ -0.41
SIL1-208ENST00000505945 DMP1Q13316 513 aaPredicted RBP12.47□□□□□ -0.41
SIL1-208ENST00000505945 XKR4Q5GH76 650 aa12.47□□□□□ -0.41
SIL1-208ENST00000505945 ERICH6BQ5W0A0 696 aa12.47□□□□□ -0.41
SIL1-208ENST00000505945 KRT79Q5XKE5 535 aa12.47□□□□□ -0.41
SIL1-208ENST00000505945 RINT1Q6NUQ1 792 aa12.47□□□□□ -0.41
SIL1-208ENST00000505945 MTSS1LQ765P7 747 aa12.47□□□□□ -0.41
SIL1-208ENST00000505945 TAS1R3Q7RTX0 852 aa12.47□□□□□ -0.41
SIL1-208ENST00000505945 KCNK18Q7Z418 384 aa12.47□□□□□ -0.41
SIL1-208ENST00000505945 NPAS3Q8IXF0 933 aa12.47□□□□□ -0.41
SIL1-208ENST00000505945 PJA1Q8NG27 643 aa12.47□□□□□ -0.41
SIL1-208ENST00000505945 KIF2CQ99661 725 aa12.47□□□□□ -0.41
SIL1-208ENST00000505945 KXD1Q9BQD3 176 aa12.47□□□□□ -0.41
SIL1-208ENST00000505945 RUSC1Q9BVN2 902 aa12.47□□□□□ -0.41
SIL1-208ENST00000505945 MRPL4Q9BYD3 311 aaKnown RBP12.47□□□□□ -0.41
SIL1-208ENST00000505945 TMEM134Q9H6X4 195 aa12.47□□□□□ -0.41
SIL1-208ENST00000505945 SH2B1Q9NRF2 756 aaPredicted RBP12.47□□□□□ -0.41
SIL1-208ENST00000505945 TOPORSQ9NS56 1045 aaPredicted RBP12.47□□□□□ -0.41
SIL1-208ENST00000505945 ARHGAP28Q9P2N2 729 aa12.47□□□□□ -0.41
SIL1-208ENST00000505945 DAXXQ9UER7 740 aaPredicted RBP12.47□□□□□ -0.41
SIL1-208ENST00000505945 STK24Q9Y6E0 443 aa12.47□□□□□ -0.41
SIL1-208ENST00000505945 MYH15Q9Y2K3 1946 aa12.47□□□□□ -0.41
SIL1-208ENST00000505945 PHLPP2Q6ZVD8 1323 aa12.46□□□□□ -0.41
SIL1-208ENST00000505945 PODXLO00592 558 aa12.46□□□□□ -0.41
SIL1-208ENST00000505945 SLC16A4O15374 487 aa12.46□□□□□ -0.41
SIL1-208ENST00000505945 POU2F2P09086 479 aa12.46□□□□□ -0.41
SIL1-208ENST00000505945 ARPP19P56211 112 aa12.46□□□□□ -0.41
SIL1-208ENST00000505945 ROR1Q01973 937 aa12.46□□□□□ -0.41
SIL1-208ENST00000505945 ZRSR1Q15695 479 aaKnown RBP12.46□□□□□ -0.41
SIL1-208ENST00000505945 SLC5A9Q2M3M2 681 aa12.46□□□□□ -0.41
SIL1-208ENST00000505945 SLC44A4Q53GD3 710 aa12.46□□□□□ -0.41
SIL1-208ENST00000505945 VARS2Q5ST30 1063 aaKnown RBP12.46□□□□□ -0.41
SIL1-208ENST00000505945 POTEHQ6S545 545 aa12.46□□□□□ -0.41
SIL1-208ENST00000505945 DTHD1Q6ZMT9 781 aa12.46□□□□□ -0.41
SIL1-208ENST00000505945 C1orf186Q6ZWK4 172 aa12.46□□□□□ -0.41
SIL1-208ENST00000505945 RTL10Q7L3V2 364 aa12.46□□□□□ -0.41
SIL1-208ENST00000505945 C1orf210Q8IVY1 113 aa12.46□□□□□ -0.41
SIL1-208ENST00000505945 ZNF461Q8TAF7 563 aa12.46□□□□□ -0.41
SIL1-208ENST00000505945 C18orf25Q96B23 403 aaPredicted RBP12.46□□□□□ -0.41
SIL1-208ENST00000505945 MCRS1Q96EZ8 462 aa12.46□□□□□ -0.41
SIL1-208ENST00000505945 SHDQ96IW2 340 aa12.46□□□□□ -0.41
SIL1-208ENST00000505945 ZBTB45Q96K62 511 aaPredicted RBP12.46□□□□□ -0.41
SIL1-208ENST00000505945 DRC1Q96MC2 740 aa12.46□□□□□ -0.41
SIL1-208ENST00000505945 ACAP3Q96P50 834 aa12.46□□□□□ -0.41
SIL1-208ENST00000505945 MMTAG2Q9BU76 263 aaKnown RBP12.46□□□□□ -0.41
SIL1-208ENST00000505945 SLC38A7Q9NVC3 462 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms