RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 CCHCR1Q8TD31 782 aa12.68□□□□□ -0.38
UBE3D-206ENST00000505226 TMEM174Q8WUU8 243 aa12.68□□□□□ -0.38
UBE3D-206ENST00000505226 DDX27Q96GQ7 796 aaKnown RBP12.68□□□□□ -0.38
UBE3D-206ENST00000505226 ACCSQ96QU6 501 aa12.68□□□□□ -0.38
UBE3D-206ENST00000505226 KIFC3Q9BVG8 833 aa12.68□□□□□ -0.38
UBE3D-206ENST00000505226 TEKT3Q9BXF9 490 aa12.68□□□□□ -0.38
UBE3D-206ENST00000505226 TDRD3Q9H7E2 651 aaKnown RBP12.68□□□□□ -0.38
UBE3D-206ENST00000505226 NOP53Q9NZM5 478 aaKnown RBP12.68□□□□□ -0.38
UBE3D-206ENST00000505226 NKX1-2Q9UD57 310 aaPredicted RBP12.68□□□□□ -0.38
UBE3D-206ENST00000505226 ANAPC5Q9UJX4 755 aa12.68□□□□□ -0.38
UBE3D-206ENST00000505226 GRID1Q9ULK0 1009 aa12.68□□□□□ -0.38
UBE3D-206ENST00000505226 MUTP22033 750 aa12.68□□□□□ -0.38
UBE3D-206ENST00000505226 CCND1P24385 295 aa12.68□□□□□ -0.38
UBE3D-206ENST00000505226 GCAP28676 217 aa12.68□□□□□ -0.38
UBE3D-206ENST00000505226 STX2P32856 288 aa12.68□□□□□ -0.38
UBE3D-206ENST00000505226 RARRES1P49788 294 aa12.68□□□□□ -0.38
UBE3D-206ENST00000505226 MTFR1Q15390 333 aa12.68□□□□□ -0.38
UBE3D-206ENST00000505226 IL31RAQ8NI17 732 aa12.68□□□□□ -0.38
UBE3D-206ENST00000505226 MAGEB18Q96M61 343 aa12.68□□□□□ -0.38
UBE3D-206ENST00000505226 PI4K2AQ9BTU6 479 aa12.68□□□□□ -0.38
UBE3D-206ENST00000505226 WDR11Q9BZH6 1224 aa12.68□□□□□ -0.38
UBE3D-206ENST00000505226 TMEM206Q9H813 350 aa12.68□□□□□ -0.38
UBE3D-206ENST00000505226 LGALS13Q9UHV8 139 aa12.68□□□□□ -0.38
UBE3D-206ENST00000505226 ZBTB21Q9ULJ3 1066 aa12.68□□□□□ -0.38
UBE3D-206ENST00000505226 SCN9AQ15858 1988 aa12.67□□□□□ -0.38
UBE3D-206ENST00000505226 DHX15O43143 795 aaKnown RBP12.67□□□□□ -0.38
UBE3D-206ENST00000505226 PLS3P13797 630 aa12.67□□□□□ -0.38
UBE3D-206ENST00000505226 GTF2BQ00403 316 aa12.67□□□□□ -0.38
UBE3D-206ENST00000505226 GBP7Q8N8V2 638 aaPredicted RBP12.67□□□□□ -0.38
UBE3D-206ENST00000505226 SLC17A8Q8NDX2 589 aa12.67□□□□□ -0.38
UBE3D-206ENST00000505226 CPA5Q8WXQ8 436 aa12.67□□□□□ -0.38
UBE3D-206ENST00000505226 MAML1Q92585 1016 aa12.67□□□□□ -0.38
UBE3D-206ENST00000505226 LARSQ9P2J5 1176 aaKnown RBP12.67□□□□□ -0.38
UBE3D-206ENST00000505226 ADGRA3Q8IWK6 1321 aa12.67□□□□□ -0.38
UBE3D-206ENST00000505226 RALAP11233 206 aa12.67□□□□□ -0.38
UBE3D-206ENST00000505226 MAPK4P31152 587 aa12.67□□□□□ -0.38
UBE3D-206ENST00000505226 MFAP3P55082 362 aa12.67□□□□□ -0.38
UBE3D-206ENST00000505226 KLF1Q13351 362 aaPredicted RBP12.67□□□□□ -0.38
UBE3D-206ENST00000505226 SNRNP35Q16560 246 aaKnown RBP12.67□□□□□ -0.38
UBE3D-206ENST00000505226 CLEC16AQ2KHT3 1053 aa12.67□□□□□ -0.38
UBE3D-206ENST00000505226 RNF43Q68DV7 783 aa12.67□□□□□ -0.38
UBE3D-206ENST00000505226 GLIS1Q8NBF1 620 aa12.67□□□□□ -0.38
UBE3D-206ENST00000505226 TMEM237Q96Q45 408 aa12.67□□□□□ -0.38
UBE3D-206ENST00000505226 MYLK2Q9H1R3 596 aa12.67□□□□□ -0.38
UBE3D-206ENST00000505226 KIF9Q9HAQ2 790 aa12.67□□□□□ -0.38
UBE3D-206ENST00000505226 SLCO1B3Q9NPD5 702 aa12.67□□□□□ -0.38
UBE3D-206ENST00000505226 COL20A1Q9P218 1284 aa12.67□□□□□ -0.38
UBE3D-206ENST00000505226 ANKRD31Q8N7Z5 1873 aa12.66□□□□□ -0.38
UBE3D-206ENST00000505226 TOM1O60784 492 aa12.66□□□□□ -0.38
UBE3D-206ENST00000505226 SPAG7O75391 227 aa12.66□□□□□ -0.38
UBE3D-206ENST00000505226 UNC5CO95185 931 aa12.66□□□□□ -0.38
UBE3D-206ENST00000505226 PEX3P56589 373 aa12.66□□□□□ -0.38
UBE3D-206ENST00000505226 UGCGQ16739 394 aa12.66□□□□□ -0.38
UBE3D-206ENST00000505226 KCNV2Q8TDN2 545 aa12.66□□□□□ -0.38
UBE3D-206ENST00000505226 PARD3BQ8TEW8 1205 aa12.66□□□□□ -0.38
UBE3D-206ENST00000505226 VTI1AQ96AJ9 217 aa12.66□□□□□ -0.38
UBE3D-206ENST00000505226 TRAIPQ9BWF2 469 aa12.66□□□□□ -0.38
UBE3D-206ENST00000505226 KCNH7Q9NS40 1196 aa12.66□□□□□ -0.38
UBE3D-206ENST00000505226 FBXO28Q9NVF7 368 aa12.66□□□□□ -0.38
UBE3D-206ENST00000505226 SLX4Q8IY92 1834 aa12.66□□□□□ -0.38
UBE3D-206ENST00000505226 G3V3G9 751 aa12.66□□□□□ -0.38
UBE3D-206ENST00000505226 PMM2O15305 246 aa12.66□□□□□ -0.38
UBE3D-206ENST00000505226 SORBS3O60504 671 aa12.66□□□□□ -0.38
UBE3D-206ENST00000505226 NEBLO76041 1014 aa12.66□□□□□ -0.38
UBE3D-206ENST00000505226 CFHP08603 1231 aa12.66□□□□□ -0.38
UBE3D-206ENST00000505226 FDX1P10109 184 aa12.66□□□□□ -0.38
UBE3D-206ENST00000505226 UNGP13051 313 aaPredicted RBP12.66□□□□□ -0.38
UBE3D-206ENST00000505226 ATF2P15336 505 aa12.66□□□□□ -0.38
UBE3D-206ENST00000505226 GM2AP17900 193 aa12.66□□□□□ -0.38
UBE3D-206ENST00000505226 ABL2P42684 1182 aa12.66□□□□□ -0.38
UBE3D-206ENST00000505226 DCAF8Q5TAQ9 597 aa12.66□□□□□ -0.38
UBE3D-206ENST00000505226 ETNK1Q9HBU6 452 aa12.66□□□□□ -0.38
UBE3D-206ENST00000505226 ATRNL1Q5VV63 1379 aa12.66□□□□□ -0.38
UBE3D-206ENST00000505226 ANKRD20A2Q5SQ80 823 aa12.66□□□□□ -0.38
UBE3D-206ENST00000505226 HP1BP3Q5SSJ5 553 aaPredicted RBP12.66□□□□□ -0.38
UBE3D-206ENST00000505226 DACT2Q5SW24 774 aa12.66□□□□□ -0.38
UBE3D-206ENST00000505226 ANKRD20A1Q5TYW2 823 aa12.66□□□□□ -0.38
UBE3D-206ENST00000505226 ANKRD20A3Q5VUR7 823 aa12.66□□□□□ -0.38
UBE3D-206ENST00000505226 MIER3Q7Z3K6 550 aa12.66□□□□□ -0.38
UBE3D-206ENST00000505226 MXRA8Q9BRK3 442 aa12.66□□□□□ -0.38
UBE3D-206ENST00000505226 ADAM33Q9BZ11 813 aa12.66□□□□□ -0.38
UBE3D-206ENST00000505226 PITPNM3Q9BZ71 974 aa12.66□□□□□ -0.38
UBE3D-206ENST00000505226 SLC24A3Q9HC58 644 aa12.66□□□□□ -0.38
UBE3D-206ENST00000505226 KLHL14Q9P2G3 628 aa12.66□□□□□ -0.38
UBE3D-206ENST00000505226 ZMYND8Q9ULU4 1186 aaPredicted RBP12.66□□□□□ -0.38
UBE3D-206ENST00000505226 CHKBQ9Y259 395 aa12.66□□□□□ -0.38
UBE3D-206ENST00000505226 COQ4Q9Y3A0 265 aa12.66□□□□□ -0.38
UBE3D-206ENST00000505226 EIF4E1BA6NMX2 242 aaKnown RBP12.65□□□□□ -0.38
UBE3D-206ENST00000505226 ATP5DP30049 168 aa12.65□□□□□ -0.38
UBE3D-206ENST00000505226 GPC3P51654 580 aa12.65□□□□□ -0.38
UBE3D-206ENST00000505226 TAS2R40P59535 323 aa12.65□□□□□ -0.38
UBE3D-206ENST00000505226 DNAJC3Q13217 504 aa12.65□□□□□ -0.38
UBE3D-206ENST00000505226 KRT39Q6A163 491 aa12.65□□□□□ -0.38
UBE3D-206ENST00000505226 CYP4F22Q6NT55 531 aa12.65□□□□□ -0.38
UBE3D-206ENST00000505226 MCOLN2Q8IZK6 566 aa12.65□□□□□ -0.38
UBE3D-206ENST00000505226 ATL2Q8NHH9 583 aa12.65□□□□□ -0.38
UBE3D-206ENST00000505226 PAIP2Q9BPZ3 127 aaKnown RBP12.65□□□□□ -0.38
UBE3D-206ENST00000505226 RANBP17Q9H2T7 1088 aaKnown RBP12.65□□□□□ -0.38
UBE3D-206ENST00000505226 RASA4BC9J798 803 aa12.65□□□□□ -0.38
UBE3D-206ENST00000505226 RASA4O43374 803 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms