RNA–Protein interactions for RNA: ENST00000504849.5

RFC1-208, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-208ENST00000504849 GULP1Q9UBP9 304 aa4.81□□□□□ -1.64
RFC1-208ENST00000504849 DNM3Q9UQ16 869 aa4.81□□□□□ -1.64
RFC1-208ENST00000504849 DGKBQ9Y6T7 804 aa4.81□□□□□ -1.64
RFC1-208ENST00000504849 VWDEQ8N2E2 1590 aa4.81□□□□□ -1.64
RFC1-208ENST00000504849 PREX1Q8TCU6 1659 aa4.8□□□□□ -1.64
RFC1-208ENST00000504849 INO80Q9ULG1 1556 aaPredicted RBP4.8□□□□□ -1.64
RFC1-208ENST00000504849 F5H423 210 aaPredicted RBP4.8□□□□□ -1.64
RFC1-208ENST00000504849 H7C1D1 291 aa4.8□□□□□ -1.64
RFC1-208ENST00000504849 DYNC1I1O14576 645 aa4.8□□□□□ -1.64
RFC1-208ENST00000504849 ZNF500O60304 480 aaPredicted RBP4.8□□□□□ -1.64
RFC1-208ENST00000504849 VAMP4O75379 141 aa4.8□□□□□ -1.64
RFC1-208ENST00000504849 BAG4O95429 457 aaKnown RBP4.8□□□□□ -1.64
RFC1-208ENST00000504849 NTRK1P04629 796 aa4.8□□□□□ -1.64
RFC1-208ENST00000504849 THBDP07204 575 aa4.8□□□□□ -1.64
RFC1-208ENST00000504849 SLC5A1P13866 664 aa4.8□□□□□ -1.64
RFC1-208ENST00000504849 LSP1P33241 339 aa4.8□□□□□ -1.64
RFC1-208ENST00000504849 ECE1P42892 770 aa4.8□□□□□ -1.64
RFC1-208ENST00000504849 TNNT2P45379 298 aaPredicted RBP4.8□□□□□ -1.64
RFC1-208ENST00000504849 GPR3P46089 330 aa4.8□□□□□ -1.64
RFC1-208ENST00000504849 MCM2P49736 904 aa4.8□□□□□ -1.64
RFC1-208ENST00000504849 ADKP55263 362 aaKnown RBP4.8□□□□□ -1.64
RFC1-208ENST00000504849 EXOSC9Q06265 439 aaKnown RBP4.8□□□□□ -1.64
RFC1-208ENST00000504849 NFATC3Q12968 1075 aa4.8□□□□□ -1.64
RFC1-208ENST00000504849 SIM2Q14190 667 aaPredicted RBP4.8□□□□□ -1.64
RFC1-208ENST00000504849 TERF2Q15554 542 aa4.8□□□□□ -1.64
RFC1-208ENST00000504849 PDCD2Q16342 344 aaPredicted RBP4.8□□□□□ -1.64
RFC1-208ENST00000504849 LONRF1Q17RB8 773 aa4.8□□□□□ -1.64
RFC1-208ENST00000504849 CREB3L3Q68CJ9 461 aa4.8□□□□□ -1.64
RFC1-208ENST00000504849 ZNF280DQ6N043 979 aa4.8□□□□□ -1.64
RFC1-208ENST00000504849 SASS6Q6UVJ0 657 aa4.8□□□□□ -1.64
RFC1-208ENST00000504849 C16orf59Q7L2K0 433 aa4.8□□□□□ -1.64
RFC1-208ENST00000504849 MIER2Q8N344 545 aa4.8□□□□□ -1.64
RFC1-208ENST00000504849 C2orf69Q8N8R5 385 aa4.8□□□□□ -1.64
RFC1-208ENST00000504849 SPATA5Q8NB90 893 aa4.8□□□□□ -1.64
RFC1-208ENST00000504849 PARD3BQ8TEW8 1205 aa4.8□□□□□ -1.64
RFC1-208ENST00000504849 FRS2Q8WU20 508 aa4.8□□□□□ -1.64
RFC1-208ENST00000504849 LMBR1Q8WVP7 490 aa4.8□□□□□ -1.64
RFC1-208ENST00000504849 ARHGAP45Q92619 1136 aa4.8□□□□□ -1.64
RFC1-208ENST00000504849 FBXW5Q969U6 566 aa4.8□□□□□ -1.64
RFC1-208ENST00000504849 ORAI2Q96SN7 254 aa4.8□□□□□ -1.64
RFC1-208ENST00000504849 API5Q9BZZ5 524 aaKnown RBP4.8□□□□□ -1.64
RFC1-208ENST00000504849 SEC61A2Q9H9S3 476 aa4.8□□□□□ -1.64
RFC1-208ENST00000504849 ZBTB40Q9NUA8 1239 aa4.8□□□□□ -1.64
RFC1-208ENST00000504849 NOL7Q9UMY1 257 aaKnown RBP4.8□□□□□ -1.64
RFC1-208ENST00000504849 BACE2Q9Y5Z0 518 aa4.8□□□□□ -1.64
RFC1-208ENST00000504849 LMTK2Q8IWU2 1503 aa4.8□□□□□ -1.64
RFC1-208ENST00000504849 UHRF1BP1LA0JNW5 1464 aa4.8□□□□□ -1.64
RFC1-208ENST00000504849 ZFYVE9O95405 1425 aa4.8□□□□□ -1.64
RFC1-208ENST00000504849 NOS1P29475 1434 aa4.8□□□□□ -1.64
RFC1-208ENST00000504849 KIF24Q5T7B8 1368 aa4.79□□□□□ -1.64
RFC1-208ENST00000504849 ADGRF5Q8IZF2 1346 aa4.79□□□□□ -1.64
RFC1-208ENST00000504849 ADGRB3O60242 1522 aa4.79□□□□□ -1.64
RFC1-208ENST00000504849 ATP7AQ04656 1500 aa4.79□□□□□ -1.64
RFC1-208ENST00000504849 EFCAB6Q5THR3 1501 aa4.79□□□□□ -1.64
RFC1-208ENST00000504849 SETD1BQ9UPS6 1966 aaKnown RBP4.79□□□□□ -1.64
RFC1-208ENST00000504849 UQCRHLA0A096LP55 91 aa4.79□□□□□ -1.64
RFC1-208ENST00000504849 CCDC66A2RUB6 948 aa4.79□□□□□ -1.64
RFC1-208ENST00000504849 GOLGA8AA7E2F4 631 aa4.79□□□□□ -1.64
RFC1-208ENST00000504849 GOLGA8BA8MQT2 603 aa4.79□□□□□ -1.64
RFC1-208ENST00000504849 FAM227AF5H4B4 570 aa4.79□□□□□ -1.64
RFC1-208ENST00000504849 SGSM2O43147 1006 aa4.79□□□□□ -1.64
RFC1-208ENST00000504849 TGM5O43548 720 aa4.79□□□□□ -1.64
RFC1-208ENST00000504849 PTMAP06454 111 aaKnown RBP4.79□□□□□ -1.64
RFC1-208ENST00000504849 LDHCP07864 332 aa4.79□□□□□ -1.64
RFC1-208ENST00000504849 UQCRHP07919 91 aa4.79□□□□□ -1.64
RFC1-208ENST00000504849 ADH4P08319 380 aa4.79□□□□□ -1.64
RFC1-208ENST00000504849 SRGAP2CP0DJJ0 459 aa4.79□□□□□ -1.64
RFC1-208ENST00000504849 SRGNP10124 158 aa4.79□□□□□ -1.64
RFC1-208ENST00000504849 MCCP23508 829 aa4.79□□□□□ -1.64
RFC1-208ENST00000504849 TMPOP42166 694 aaKnown RBP4.79□□□□□ -1.64
RFC1-208ENST00000504849 STAT5AP42229 794 aa4.79□□□□□ -1.64
RFC1-208ENST00000504849 NOP2P46087 812 aaKnown RBP4.79□□□□□ -1.64
RFC1-208ENST00000504849 RENBPP51606 427 aa4.79□□□□□ -1.64
RFC1-208ENST00000504849 SCAND1P57086 179 aa4.79□□□□□ -1.64
RFC1-208ENST00000504849 ST5P78524 1137 aa4.79□□□□□ -1.64
RFC1-208ENST00000504849 HMGN5P82970 282 aaKnown RBP4.79□□□□□ -1.64
RFC1-208ENST00000504849 PUM3Q15397 648 aaKnown RBP4.79□□□□□ -1.64
RFC1-208ENST00000504849 ELF2Q15723 593 aa4.79□□□□□ -1.64
RFC1-208ENST00000504849 ANKRD45Q5TZF3 282 aa4.79□□□□□ -1.64
RFC1-208ENST00000504849 RCSD1Q6JBY9 416 aa4.79□□□□□ -1.64
RFC1-208ENST00000504849 ZC3H18Q86VM9 953 aaKnown RBP4.79□□□□□ -1.64
RFC1-208ENST00000504849 TMEM57Q8N5G2 664 aa4.79□□□□□ -1.64
RFC1-208ENST00000504849 ZNF610Q8N9Z0 462 aa4.79□□□□□ -1.64
RFC1-208ENST00000504849 PPHLN1Q8NEY8 458 aaKnown RBP4.79□□□□□ -1.64
RFC1-208ENST00000504849 DIS3LQ8TF46 1054 aaKnown RBP4.79□□□□□ -1.64
RFC1-208ENST00000504849 POF1BQ8WVV4 589 aa4.79□□□□□ -1.64
RFC1-208ENST00000504849 HPS3Q969F9 1004 aa4.79□□□□□ -1.64
RFC1-208ENST00000504849 SGCZQ96LD1 299 aa4.79□□□□□ -1.64
RFC1-208ENST00000504849 TBATAQ96M53 351 aa4.79□□□□□ -1.64
RFC1-208ENST00000504849 CCDC138Q96M89 665 aa4.79□□□□□ -1.64
RFC1-208ENST00000504849 ZSWIM3Q96MP5 696 aa4.79□□□□□ -1.64
RFC1-208ENST00000504849 ACAP3Q96P50 834 aa4.79□□□□□ -1.64
RFC1-208ENST00000504849 MCMBPQ9BTE3 642 aa4.79□□□□□ -1.64
RFC1-208ENST00000504849 BOCQ9BWV1 1114 aa4.79□□□□□ -1.64
RFC1-208ENST00000504849 TMEM60Q9H2L4 133 aa4.79□□□□□ -1.64
RFC1-208ENST00000504849 C9orf78Q9NZ63 289 aaPredicted RBP4.79□□□□□ -1.64
RFC1-208ENST00000504849 NRBP1Q9UHY1 535 aa4.79□□□□□ -1.64
RFC1-208ENST00000504849 TNNQ9UQP3 1299 aa4.79□□□□□ -1.64
RFC1-208ENST00000504849 NOC2LQ9Y3T9 749 aaKnown RBP4.79□□□□□ -1.64
RFC1-208ENST00000504849 SPO11Q9Y5K1 396 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms