RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 CACNG4Q9UBN1 327 aa5.38□□□□□ -1.55
LMNB1-208ENST00000504788 DNAJB4Q9UDY4 337 aa5.38□□□□□ -1.55
LMNB1-208ENST00000504788 SIX4Q9UIU6 781 aa5.38□□□□□ -1.55
LMNB1-208ENST00000504788 EXOC7Q9UPT5 735 aa5.38□□□□□ -1.55
LMNB1-208ENST00000504788 CTNND2Q9UQB3 1225 aa5.38□□□□□ -1.55
LMNB1-208ENST00000504788 PTPRDP23468 1912 aa5.38□□□□□ -1.55
LMNB1-208ENST00000504788 MYO7AQ13402 2215 aa5.38□□□□□ -1.55
LMNB1-208ENST00000504788 LINC01553A4QN01 128 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 LRRIQ3A6PVS8 624 aaPredicted RBP5.37□□□□□ -1.55
LMNB1-208ENST00000504788 PSMA7O14818 248 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 PPEF2O14830 753 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 IKBKBO14920 756 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 AP5Z1O43299 807 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 VNN1O95497 513 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 LDHAP00338 332 aaKnown RBP5.37□□□□□ -1.55
LMNB1-208ENST00000504788 C4BPAP04003 597 aaKnown RBP5.37□□□□□ -1.55
LMNB1-208ENST00000504788 ITGB1P05556 798 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 NFICP08651 508 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 ATP2A2P16615 1042 aaKnown RBP5.37□□□□□ -1.55
LMNB1-208ENST00000504788 LRPAP1P30533 357 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 AARSP49588 968 aaKnown RBP eCLIP5.37□□□□□ -1.556e-7■■■■□ 19.6
LMNB1-208ENST00000504788 SCNN1GP51170 649 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 RABGGTBP53611 331 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 OSTNP61366 133 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 ADAM9Q13443 819 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 PSMD6Q15008 389 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 STX1AQ16623 288 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 UPP1Q16831 310 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 SPATA1Q5VX52 437 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 KLHL10Q6JEL2 608 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 LRSAM1Q6UWE0 723 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 STXBP4Q6ZWJ1 553 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 HS2ST1Q7LGA3 356 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 FILIP1Q7Z7B0 1213 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 C1orf127Q8N9H9 656 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 GOLGA5Q8TBA6 731 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 HELQQ8TDG4 1101 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 FAM212AQ96EL1 285 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 CEP63Q96MT8 703 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 ACAP3Q96P50 834 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 POP1Q99575 1024 aaKnown RBP5.37□□□□□ -1.55
LMNB1-208ENST00000504788 LBHD1Q9BQE6 289 aaPredicted RBP5.37□□□□□ -1.55
LMNB1-208ENST00000504788 ADPGKQ9BRR6 497 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 FAM213AQ9BRX8 229 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 UBE2OQ9C0C9 1292 aaKnown RBP5.37□□□□□ -1.55
LMNB1-208ENST00000504788 TMEM117Q9H0C3 514 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 XYLT2Q9H1B5 865 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 ASB7Q9H672 318 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 NRDE2Q9H7Z3 1164 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 GOLGA2P5Q9HBQ8 144 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 TOPORSQ9NS56 1045 aaPredicted RBP5.37□□□□□ -1.55
LMNB1-208ENST00000504788 ANO10Q9NW15 660 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 MARCH5Q9NX47 278 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 KLK14Q9P0G3 267 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 COQ4Q9Y3A0 265 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 C2CD2Q9Y426 696 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 MRPL42Q9Y6G3 142 aaKnown RBP5.37□□□□□ -1.55
LMNB1-208ENST00000504788 MYO9BQ13459 2157 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 C5orf67F2Z3F1 127 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 PIRO00625 290 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 PMM2O15305 246 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 SLC16A3O15427 465 aaKnown RBP5.37□□□□□ -1.55
LMNB1-208ENST00000504788 LPXNO60711 386 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 LETM1O95202 739 aaPredicted RBP5.37□□□□□ -1.55
LMNB1-208ENST00000504788 KIF20AO95235 890 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 CST3P01034 146 aaPredicted RBP5.37□□□□□ -1.55
LMNB1-208ENST00000504788 AMHP03971 560 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 SKIP12755 728 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 ACTN1P12814 892 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 ITGA4P13612 1032 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 ATP1A3P13637 1013 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 CYP2J2P51589 502 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 GUCY2FP51841 1108 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 TAP1Q03518 808 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 SPAG1Q07617 926 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 BFSP1Q12934 665 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 GRIK3Q13003 919 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 ZACNQ401N2 412 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 CBWD6Q4V339 395 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 NOMO2Q5JPE7 1267 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 CBWD3Q5JTY5 395 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 GLRA4Q5JXX5 417 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 CBWD5Q5RIA9 395 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 PRPF38BQ5VTL8 546 aaKnown RBP5.37□□□□□ -1.55
LMNB1-208ENST00000504788 JADE1Q6IE81 842 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 CMTR2Q8IYT2 770 aaKnown RBP5.37□□□□□ -1.55
LMNB1-208ENST00000504788 SYCP3Q8IZU3 236 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 CSGALNACT2Q8N6G5 542 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 RDH13Q8NBN7 331 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 TMC2Q8TDI7 906 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 RSPH1Q8WYR4 309 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 CCDC47Q96A33 483 aaKnown RBP5.37□□□□□ -1.55
LMNB1-208ENST00000504788 SYAP1Q96A49 352 aaPredicted RBP5.37□□□□□ -1.55
LMNB1-208ENST00000504788 C18orf25Q96B23 403 aaPredicted RBP5.37□□□□□ -1.55
LMNB1-208ENST00000504788 BICD1Q96G01 975 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 RNPC3Q96LT9 517 aaKnown RBP5.37□□□□□ -1.55
LMNB1-208ENST00000504788 RAD9AQ99638 391 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 TCHPQ9BT92 498 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 SRRTQ9BXP5 876 aaKnown RBP5.37□□□□□ -1.55
LMNB1-208ENST00000504788 CBX8Q9HC52 389 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms