RNA–Protein interactions for RNA: ENST00000504687.5

LMNA-220, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-220ENST00000504687 GRM5P41594 1212 aa14.31□□□□□ -0.12
LMNA-220ENST00000504687 PIK3CAP42336 1068 aa14.31□□□□□ -0.12
LMNA-220ENST00000504687 CRYBB1P53674 252 aaPredicted RBP14.31□□□□□ -0.12
LMNA-220ENST00000504687 BPIFB4P59827 614 aa14.31□□□□□ -0.12
LMNA-220ENST00000504687 BEX3Q00994 111 aa14.31□□□□□ -0.12
LMNA-220ENST00000504687 ARID5AQ03989 594 aa14.31□□□□□ -0.12
LMNA-220ENST00000504687 HIC1Q14526 733 aa14.31□□□□□ -0.12
LMNA-220ENST00000504687 ARHGAP44Q17R89 818 aa14.31□□□□□ -0.12
LMNA-220ENST00000504687 PAPD7Q5XG87 772 aaKnown RBP14.31□□□□□ -0.12
LMNA-220ENST00000504687 TRAPPC11Q7Z392 1133 aa14.31□□□□□ -0.12
LMNA-220ENST00000504687 ZBTB33Q86T24 672 aa14.31□□□□□ -0.12
LMNA-220ENST00000504687 C7orf31Q8N865 590 aa14.31□□□□□ -0.12
LMNA-220ENST00000504687 LNX1Q8TBB1 728 aaPredicted RBP14.31□□□□□ -0.12
LMNA-220ENST00000504687 EPS8L1Q8TE68 723 aa14.31□□□□□ -0.12
LMNA-220ENST00000504687 AGPAT1Q99943 283 aa14.31□□□□□ -0.12
LMNA-220ENST00000504687 VRTNQ9H8Y1 702 aa14.31□□□□□ -0.12
LMNA-220ENST00000504687 PLEKHA5Q9HAU0 1116 aa14.31□□□□□ -0.12
LMNA-220ENST00000504687 GTF2IRD1Q9UHL9 959 aa14.31□□□□□ -0.12
LMNA-220ENST00000504687 DERAQ9Y315 318 aa14.31□□□□□ -0.12
LMNA-220ENST00000504687 C2CD2Q9Y426 696 aa14.31□□□□□ -0.12
LMNA-220ENST00000504687 MRFAP1Q9Y605 127 aa14.31□□□□□ -0.12
LMNA-220ENST00000504687 CITO14578 2027 aa14.31□□□□□ -0.12
LMNA-220ENST00000504687 PDCD11Q14690 1871 aaKnown RBP14.3□□□□□ -0.12
LMNA-220ENST00000504687 DYNC1I1O14576 645 aa14.3□□□□□ -0.12
LMNA-220ENST00000504687 LRRN2O75325 713 aa14.3□□□□□ -0.12
LMNA-220ENST00000504687 TACC1O75410 805 aa14.3□□□□□ -0.12
LMNA-220ENST00000504687 CABYRO75952 493 aa14.3□□□□□ -0.12
LMNA-220ENST00000504687 SLU7O95391 586 aaKnown RBP14.3□□□□□ -0.12
LMNA-220ENST00000504687 STAU1O95793 577 aaKnown RBP14.3□□□□□ -0.12
LMNA-220ENST00000504687 H2AFZP0C0S5 128 aa14.3□□□□□ -0.12
LMNA-220ENST00000504687 C6orf222P0C671 652 aaPredicted RBP14.3□□□□□ -0.12
LMNA-220ENST00000504687 STAG3L1P0CL83 205 aa14.3□□□□□ -0.12
LMNA-220ENST00000504687 HOXA11P31270 313 aaPredicted RBP14.3□□□□□ -0.12
LMNA-220ENST00000504687 HADHBP55084 474 aaKnown RBP14.3□□□□□ -0.12
LMNA-220ENST00000504687 TUBB4BP68371 445 aa14.3□□□□□ -0.12
LMNA-220ENST00000504687 AMPD2Q01433 879 aa14.3□□□□□ -0.12
LMNA-220ENST00000504687 CAP1Q01518 475 aa14.3□□□□□ -0.12
LMNA-220ENST00000504687 PTPN11Q06124 597 aaPredicted RBP14.3□□□□□ -0.12
LMNA-220ENST00000504687 BIRC3Q13489 604 aa14.3□□□□□ -0.12
LMNA-220ENST00000504687 CUL2Q13617 745 aa14.3□□□□□ -0.12
LMNA-220ENST00000504687 NCOA4Q13772 614 aa14.3□□□□□ -0.12
LMNA-220ENST00000504687 IFI16Q16666 785 aaKnown RBP14.3□□□□□ -0.12
LMNA-220ENST00000504687 SGSM1Q2NKQ1 1148 aa14.3□□□□□ -0.12
LMNA-220ENST00000504687 GNASQ5JWF2 1037 aa14.3□□□□□ -0.12
LMNA-220ENST00000504687 H2AFVQ71UI9 128 aa14.3□□□□□ -0.12
LMNA-220ENST00000504687 UBR7Q8N806 425 aa14.3□□□□□ -0.12
LMNA-220ENST00000504687 OR5B17Q8NGF7 314 aa14.3□□□□□ -0.12
LMNA-220ENST00000504687 TATDN2Q93075 761 aa14.3□□□□□ -0.12
LMNA-220ENST00000504687 ERO1AQ96HE7 468 aa14.3□□□□□ -0.12
LMNA-220ENST00000504687 ANKRD36BP1Q96IX9 119 aa14.3□□□□□ -0.12
LMNA-220ENST00000504687 NOX5Q96PH1 765 aa14.3□□□□□ -0.12
LMNA-220ENST00000504687 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.3□□□□□ -0.12
LMNA-220ENST00000504687 IMPG2Q9BZV3 1241 aa14.3□□□□□ -0.12
LMNA-220ENST00000504687 ISCUQ9H1K1 167 aa14.3□□□□□ -0.12
LMNA-220ENST00000504687 HDAC6Q9UBN7 1215 aa14.3□□□□□ -0.12
LMNA-220ENST00000504687 TRIM10Q9UDY6 481 aa14.3□□□□□ -0.12
LMNA-220ENST00000504687 CDC23Q9UJX2 597 aa14.3□□□□□ -0.12
LMNA-220ENST00000504687 NOCTQ9UK39 431 aaKnown RBP14.3□□□□□ -0.12
LMNA-220ENST00000504687 JRKLQ9Y4A0 524 aa14.3□□□□□ -0.12
LMNA-220ENST00000504687 PCDHGC5Q9Y5F6 944 aa14.3□□□□□ -0.12
LMNA-220ENST00000504687 TRIP12Q14669 1992 aaPredicted RBP14.3□□□□□ -0.12
LMNA-220ENST00000504687 FRMPD3Q5JV73 1810 aa14.29□□□□□ -0.12
LMNA-220ENST00000504687 MYADML2A6NDP7 307 aa14.29□□□□□ -0.12
LMNA-220ENST00000504687 TREHO43280 583 aa14.29□□□□□ -0.12
LMNA-220ENST00000504687 TNNC2P02585 160 aa14.29□□□□□ -0.12
LMNA-220ENST00000504687 TMEM253P0C7T8 217 aa14.29□□□□□ -0.12
LMNA-220ENST00000504687 ACO1P21399 889 aaKnown RBP14.29□□□□□ -0.12
LMNA-220ENST00000504687 TNFAIP3P21580 790 aa14.29□□□□□ -0.12
LMNA-220ENST00000504687 ATICP31939 592 aa14.29□□□□□ -0.12
LMNA-220ENST00000504687 NOP14P78316 857 aaKnown RBP14.29□□□□□ -0.12
LMNA-220ENST00000504687 IRX5P78411 483 aaPredicted RBP14.29□□□□□ -0.12
LMNA-220ENST00000504687 SNX17Q15036 470 aa14.29□□□□□ -0.12
LMNA-220ENST00000504687 PPP1R2P3Q6NXS1 205 aa14.29□□□□□ -0.12
LMNA-220ENST00000504687 NOTUMQ6P988 496 aa14.29□□□□□ -0.12
LMNA-220ENST00000504687 SLC27A1Q6PCB7 646 aa14.29□□□□□ -0.12
LMNA-220ENST00000504687 RUFY4Q6ZNE9 571 aa14.29□□□□□ -0.12
LMNA-220ENST00000504687 THNSL1Q8IYQ7 743 aa14.29□□□□□ -0.12
LMNA-220ENST00000504687 PCSK9Q8NBP7 692 aaKnown RBP14.29□□□□□ -0.12
LMNA-220ENST00000504687 KAT5Q92993 513 aa14.29□□□□□ -0.12
LMNA-220ENST00000504687 ALS2CR12Q96Q35 445 aa14.29□□□□□ -0.12
LMNA-220ENST00000504687 XPNPEP3Q9NQH7 507 aa14.29□□□□□ -0.12
LMNA-220ENST00000504687 WBP1LQ9NX94 342 aa14.29□□□□□ -0.12
LMNA-220ENST00000504687 TSKSQ9UJT2 592 aa14.29□□□□□ -0.12
LMNA-220ENST00000504687 PCDHB2Q9Y5E7 798 aa14.29□□□□□ -0.12
LMNA-220ENST00000504687 NCANO14594 1321 aa14.29□□□□□ -0.12
LMNA-220ENST00000504687 MROH7Q68CQ1 1323 aa14.29□□□□□ -0.12
LMNA-220ENST00000504687 UQCRHLA0A096LP55 91 aa14.28□□□□□ -0.12
LMNA-220ENST00000504687 ANKRD62A6NC57 917 aa14.28□□□□□ -0.12
LMNA-220ENST00000504687 URI1O94763 535 aaPredicted RBP14.28□□□□□ -0.12
LMNA-220ENST00000504687 UQCRHP07919 91 aa14.28□□□□□ -0.12
LMNA-220ENST00000504687 TMEM191BP0C7N4 346 aa14.28□□□□□ -0.12
LMNA-220ENST00000504687 PNMA6AP0CW24 399 aaPredicted RBP14.28□□□□□ -0.12
LMNA-220ENST00000504687 HARSP12081 509 aaKnown RBP14.28□□□□□ -0.12
LMNA-220ENST00000504687 PRKAR2AP13861 404 aaKnown RBP14.28□□□□□ -0.12
LMNA-220ENST00000504687 CYP11B1P15538 503 aa14.28□□□□□ -0.12
LMNA-220ENST00000504687 ZNF132P52740 706 aa14.28□□□□□ -0.12
LMNA-220ENST00000504687 CDR2Q01850 454 aa14.28□□□□□ -0.12
LMNA-220ENST00000504687 WHAMMP3Q1A5X7 153 aa14.28□□□□□ -0.12
LMNA-220ENST00000504687 TMEM132AQ24JP5 1023 aa14.28□□□□□ -0.12
LMNA-220ENST00000504687 KIZQ2M2Z5 673 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms