RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 KLHDC10Q6PID8 442 aa5.75□□□□□ -1.49
NIPBL-204ENST00000504430 SYT9Q86SS6 491 aa5.75□□□□□ -1.49
NIPBL-204ENST00000504430 RPAP2Q8IXW5 612 aaPredicted RBP5.75□□□□□ -1.49
NIPBL-204ENST00000504430 SP8Q8IXZ3 490 aa5.75□□□□□ -1.49
NIPBL-204ENST00000504430 DCLK2Q8N568 766 aa5.75□□□□□ -1.49
NIPBL-204ENST00000504430 SRBD1Q8N5C6 995 aaKnown RBP5.75□□□□□ -1.49
NIPBL-204ENST00000504430 SMCR8Q8TEV9 937 aaPredicted RBP5.75□□□□□ -1.49
NIPBL-204ENST00000504430 CABS1Q96KC9 395 aa5.75□□□□□ -1.49
NIPBL-204ENST00000504430 CARD11Q9BXL7 1154 aa5.75□□□□□ -1.49
NIPBL-204ENST00000504430 ITPAQ9BY32 194 aa5.75□□□□□ -1.49
NIPBL-204ENST00000504430 PNPLA8Q9NP80 782 aa5.75□□□□□ -1.49
NIPBL-204ENST00000504430 KRT87PA6NCN2 255 aa5.75□□□□□ -1.49
NIPBL-204ENST00000504430 CCDC69A6NI79 296 aa5.75□□□□□ -1.49
NIPBL-204ENST00000504430 KIF1CO43896 1103 aaKnown RBP5.75□□□□□ -1.49
NIPBL-204ENST00000504430 PLA2G6O60733 806 aa5.75□□□□□ -1.49
NIPBL-204ENST00000504430 CAMTA2O94983 1202 aa5.75□□□□□ -1.49
NIPBL-204ENST00000504430 MXI1P50539 228 aa5.75□□□□□ -1.49
NIPBL-204ENST00000504430 SATB1Q01826 763 aa5.75□□□□□ -1.49
NIPBL-204ENST00000504430 FAM47CQ5HY64 1035 aa5.75□□□□□ -1.49
NIPBL-204ENST00000504430 MCTP1Q6DN14 999 aa5.75□□□□□ -1.49
NIPBL-204ENST00000504430 ZCCHC12Q6PEW1 402 aa5.75□□□□□ -1.49
NIPBL-204ENST00000504430 ELMSAN1Q6PJG2 1045 aa5.75□□□□□ -1.49
NIPBL-204ENST00000504430 ABRAXAS1Q6UWZ7 409 aa5.75□□□□□ -1.49
NIPBL-204ENST00000504430 MEX3BQ6ZN04 569 aaKnown RBP5.75□□□□□ -1.49
NIPBL-204ENST00000504430 ZNF765Q7L2R6 523 aa5.75□□□□□ -1.49
NIPBL-204ENST00000504430 HID1Q8IV36 788 aa5.75□□□□□ -1.49
NIPBL-204ENST00000504430 LINS1Q8NG48 757 aa5.75□□□□□ -1.49
NIPBL-204ENST00000504430 OR2I1PQ8NGU4 316 aa5.75□□□□□ -1.49
NIPBL-204ENST00000504430 NEDD1Q8NHV4 660 aa5.75□□□□□ -1.49
NIPBL-204ENST00000504430 BRSK1Q8TDC3 778 aa5.75□□□□□ -1.49
NIPBL-204ENST00000504430 SLC35A4Q96G79 324 aa5.75□□□□□ -1.49
NIPBL-204ENST00000504430 SPATA17Q96L03 361 aa5.75□□□□□ -1.49
NIPBL-204ENST00000504430 SEMA6BQ9H3T3 888 aa5.75□□□□□ -1.49
NIPBL-204ENST00000504430 RWDD1Q9H446 243 aaPredicted RBP5.75□□□□□ -1.49
NIPBL-204ENST00000504430 DDX18Q9NVP1 670 aaKnown RBP5.75□□□□□ -1.49
NIPBL-204ENST00000504430 OGDHLQ9ULD0 1010 aa5.75□□□□□ -1.49
NIPBL-204ENST00000504430 PCDHA6Q9UN73 950 aa5.75□□□□□ -1.49
NIPBL-204ENST00000504430 NKRFO15226 690 aaKnown RBP eCLIP5.75□□□□□ -1.49
NIPBL-204ENST00000504430 LSP1P33241 339 aa5.75□□□□□ -1.49
NIPBL-204ENST00000504430 CTBSQ01459 385 aa5.75□□□□□ -1.49
NIPBL-204ENST00000504430 SLC2A7Q6PXP3 512 aa5.75□□□□□ -1.49
NIPBL-204ENST00000504430 PPP1R42Q7Z4L9 355 aa5.75□□□□□ -1.49
NIPBL-204ENST00000504430 R3HCC1LQ7Z5L2 792 aaKnown RBP5.75□□□□□ -1.49
NIPBL-204ENST00000504430 AFG1LQ8WV93 481 aa5.75□□□□□ -1.49
NIPBL-204ENST00000504430 FBXW5Q969U6 566 aa5.75□□□□□ -1.49
NIPBL-204ENST00000504430 PPP1R13BQ96KQ4 1090 aa5.75□□□□□ -1.49
NIPBL-204ENST00000504430 SLC13A4Q9UKG4 626 aa5.75□□□□□ -1.49
NIPBL-204ENST00000504430 TBC1D30Q9Y2I9 924 aa5.75□□□□□ -1.49
NIPBL-204ENST00000504430 A0A1W2PPC4 97 aa5.74□□□□□ -1.49
NIPBL-204ENST00000504430 C2orf71A6NGG8 1288 aa5.74□□□□□ -1.49
NIPBL-204ENST00000504430 SLC27A2O14975 620 aa5.74□□□□□ -1.49
NIPBL-204ENST00000504430 DRD2P14416 443 aa5.74□□□□□ -1.49
NIPBL-204ENST00000504430 TFEBP19484 476 aa5.74□□□□□ -1.49
NIPBL-204ENST00000504430 TRPC3Q13507 836 aa5.74□□□□□ -1.49
NIPBL-204ENST00000504430 ARHGEF18Q6ZSZ5 1173 aa5.74□□□□□ -1.49
NIPBL-204ENST00000504430 LPCAT2Q7L5N7 544 aa5.74□□□□□ -1.49
NIPBL-204ENST00000504430 KLHL23Q8NBE8 558 aa5.74□□□□□ -1.49
NIPBL-204ENST00000504430 IL31RAQ8NI17 732 aa5.74□□□□□ -1.49
NIPBL-204ENST00000504430 RFFLQ8WZ73 363 aa5.74□□□□□ -1.49
NIPBL-204ENST00000504430 SHC3Q92529 594 aa5.74□□□□□ -1.49
NIPBL-204ENST00000504430 KREMEN1Q96MU8 473 aa5.74□□□□□ -1.49
NIPBL-204ENST00000504430 ZNF287Q9HBT7 754 aa5.74□□□□□ -1.49
NIPBL-204ENST00000504430 INCENPQ9NQS7 918 aa5.74□□□□□ -1.49
NIPBL-204ENST00000504430 GPR27Q9NS67 375 aa5.74□□□□□ -1.49
NIPBL-204ENST00000504430 PKD2L1Q9P0L9 805 aa5.74□□□□□ -1.49
NIPBL-204ENST00000504430 DNMT3LQ9UJW3 386 aa5.74□□□□□ -1.49
NIPBL-204ENST00000504430 ZNF215Q9UL58 517 aaPredicted RBP5.74□□□□□ -1.49
NIPBL-204ENST00000504430 ANGPTL3Q9Y5C1 460 aa5.74□□□□□ -1.49
NIPBL-204ENST00000504430 TTC24A2A3L6 582 aaPredicted RBP5.74□□□□□ -1.49
NIPBL-204ENST00000504430 RGSL1A5PLK6 1076 aa5.74□□□□□ -1.49
NIPBL-204ENST00000504430 AGAP14A8MT82 685 aa5.74□□□□□ -1.49
NIPBL-204ENST00000504430 NUDT19A8MXV4 375 aa5.74□□□□□ -1.49
NIPBL-204ENST00000504430 PROM1O43490 865 aa5.74□□□□□ -1.49
NIPBL-204ENST00000504430 ASNA1O43681 348 aa5.74□□□□□ -1.49
NIPBL-204ENST00000504430 KERAO60938 352 aa5.74□□□□□ -1.49
NIPBL-204ENST00000504430 SLC22A3O75751 556 aa5.74□□□□□ -1.49
NIPBL-204ENST00000504430 IL18RAPO95256 599 aa5.74□□□□□ -1.49
NIPBL-204ENST00000504430 A1BGP04217 495 aa5.74□□□□□ -1.49
NIPBL-204ENST00000504430 SNRNP70P08621 437 aaKnown RBP5.74□□□□□ -1.49
NIPBL-204ENST00000504430 HSPA5P11021 654 aaKnown RBP5.74□□□□□ -1.49
NIPBL-204ENST00000504430 RXRAP19793 462 aa5.74□□□□□ -1.49
NIPBL-204ENST00000504430 PNLIPRP1P54315 467 aa5.74□□□□□ -1.49
NIPBL-204ENST00000504430 ACTN3Q08043 901 aaPredicted RBP5.74□□□□□ -1.49
NIPBL-204ENST00000504430 STXBP5Q5T5C0 1151 aa5.74□□□□□ -1.49
NIPBL-204ENST00000504430 TAF2Q6P1X5 1199 aa5.74□□□□□ -1.49
NIPBL-204ENST00000504430 NRG4Q8WWG1 115 aa5.74□□□□□ -1.49
NIPBL-204ENST00000504430 ZNF396Q96N95 335 aaPredicted RBP5.74□□□□□ -1.49
NIPBL-204ENST00000504430 ZMAT5Q9UDW3 170 aaKnown RBP5.74□□□□□ -1.49
NIPBL-204ENST00000504430 MYPNQ86TC9 1320 aa5.74□□□□□ -1.49
NIPBL-204ENST00000504430 SLC12A8A0AV02 714 aa5.73□□□□□ -1.49
NIPBL-204ENST00000504430 NT5C1B-RDH14C9J2C7 533 aa5.73□□□□□ -1.49
NIPBL-204ENST00000504430 SLC7A1P30825 629 aa5.73□□□□□ -1.49
NIPBL-204ENST00000504430 GRK3P35626 688 aa5.73□□□□□ -1.49
NIPBL-204ENST00000504430 MLH1P40692 756 aa5.73□□□□□ -1.49
NIPBL-204ENST00000504430 LGALS4P56470 323 aa5.73□□□□□ -1.49
NIPBL-204ENST00000504430 UBE3CQ15386 1083 aa5.73□□□□□ -1.49
NIPBL-204ENST00000504430 ZNF174Q15697 407 aa5.73□□□□□ -1.49
NIPBL-204ENST00000504430 TBCEQ15813 527 aaPredicted RBP5.73□□□□□ -1.49
NIPBL-204ENST00000504430 CAVIN1Q6NZI2 390 aaKnown RBP5.73□□□□□ -1.49
NIPBL-204ENST00000504430 SZRD1Q7Z422 152 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms