RNA–Protein interactions for RNA: ENST00000504224.5

RNF4-205, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-205ENST00000504224 ITFG1Q8TB96 612 aa23.6■■□□□ 1.37
RNF4-205ENST00000504224 KCNG4Q8TDN1 519 aa23.6■■□□□ 1.37
RNF4-205ENST00000504224 TOPORSQ9NS56 1045 aaPredicted RBP23.6■■□□□ 1.37
RNF4-205ENST00000504224 HCFC1R1Q9NWW0 138 aa23.6■■□□□ 1.37
RNF4-205ENST00000504224 PCDHB6Q9Y5E3 794 aa23.6■■□□□ 1.37
RNF4-205ENST00000504224 PHLPP2Q6ZVD8 1323 aa23.59■■□□□ 1.37
RNF4-205ENST00000504224 SMIM28A0A1B0GU29 152 aa23.59■■□□□ 1.37
RNF4-205ENST00000504224 E9PMD0 336 aa23.59■■□□□ 1.37
RNF4-205ENST00000504224 GRM5P41594 1212 aa23.59■■□□□ 1.37
RNF4-205ENST00000504224 BRCC3P46736 316 aa23.59■■□□□ 1.37
RNF4-205ENST00000504224 NPTX2P47972 431 aa23.59■■□□□ 1.37
RNF4-205ENST00000504224 GPC5P78333 572 aa23.59■■□□□ 1.37
RNF4-205ENST00000504224 DMP1Q13316 513 aaPredicted RBP23.59■■□□□ 1.37
RNF4-205ENST00000504224 UPP1Q16831 310 aa23.59■■□□□ 1.37
RNF4-205ENST00000504224 KRT79Q5XKE5 535 aa23.59■■□□□ 1.37
RNF4-205ENST00000504224 ANKS3Q6ZW76 656 aa23.59■■□□□ 1.37
RNF4-205ENST00000504224 MTSS1LQ765P7 747 aa23.59■■□□□ 1.37
RNF4-205ENST00000504224 ACO2Q99798 780 aaKnown RBP23.59■■□□□ 1.37
RNF4-205ENST00000504224 CDT1Q9H211 546 aa23.59■■□□□ 1.37
RNF4-205ENST00000504224 KMT5AQ9NQR1 393 aa23.59■■□□□ 1.37
RNF4-205ENST00000504224 DAXXQ9UER7 740 aaPredicted RBP23.59■■□□□ 1.37
RNF4-205ENST00000504224 PP2D1A8MPX8 630 aa23.58■■□□□ 1.37
RNF4-205ENST00000504224 HIP1RO75146 1068 aa23.58■■□□□ 1.37
RNF4-205ENST00000504224 UVSSAQ2YD98 709 aa23.58■■□□□ 1.37
RNF4-205ENST00000504224 PABPC1LQ4VXU2 614 aaKnown RBP23.58■■□□□ 1.37
RNF4-205ENST00000504224 RSPO2Q6UXX9 243 aaPredicted RBP23.58■■□□□ 1.37
RNF4-205ENST00000504224 IGSF22Q8N9C0 903 aa23.58■■□□□ 1.37
RNF4-205ENST00000504224 ING5Q8WYH8 240 aa23.58■■□□□ 1.37
RNF4-205ENST00000504224 DDX27Q96GQ7 796 aaKnown RBP23.58■■□□□ 1.37
RNF4-205ENST00000504224 TCHPQ9BT92 498 aa23.58■■□□□ 1.37
RNF4-205ENST00000504224 TARS2Q9BW92 718 aaKnown RBP23.58■■□□□ 1.37
RNF4-205ENST00000504224 MRPL4Q9BYD3 311 aaKnown RBP23.58■■□□□ 1.37
RNF4-205ENST00000504224 FOXQ1Q9C009 403 aa23.58■■□□□ 1.37
RNF4-205ENST00000504224 CFAP54Q96N23 3096 aa23.57■■□□□ 1.36
RNF4-205ENST00000504224 HARSP12081 509 aaKnown RBP23.57■■□□□ 1.36
RNF4-205ENST00000504224 U2AF2P26368 475 aaKnown RBP eCLIP23.57■■□□□ 1.366e-8■□□□□ 9.9
RNF4-205ENST00000504224 TOB1P50616 345 aaPredicted RBP23.57■■□□□ 1.36
RNF4-205ENST00000504224 ZRSR1Q15695 479 aaKnown RBP23.57■■□□□ 1.36
RNF4-205ENST00000504224 CD300LGQ6UXG3 332 aa23.57■■□□□ 1.36
RNF4-205ENST00000504224 C3orf58Q8NDZ4 430 aa23.57■■□□□ 1.36
RNF4-205ENST00000504224 SHDQ96IW2 340 aa23.57■■□□□ 1.36
RNF4-205ENST00000504224 DRC1Q96MC2 740 aa23.57■■□□□ 1.36
RNF4-205ENST00000504224 TBC1D32Q96NH3 1257 aa23.57■■□□□ 1.36
RNF4-205ENST00000504224 KXD1Q9BQD3 176 aa23.57■■□□□ 1.36
RNF4-205ENST00000504224 RUSC1Q9BVN2 902 aa23.57■■□□□ 1.36
RNF4-205ENST00000504224 TMEM134Q9H6X4 195 aa23.57■■□□□ 1.36
RNF4-205ENST00000504224 SLC38A7Q9NVC3 462 aa23.57■■□□□ 1.36
RNF4-205ENST00000504224 DNMT3BQ9UBC3 853 aaKnown RBP23.57■■□□□ 1.36
RNF4-205ENST00000504224 BACE2Q9Y5Z0 518 aa23.57■■□□□ 1.36
RNF4-205ENST00000504224 CDC25AP30304 524 aa23.56■■□□□ 1.36
RNF4-205ENST00000504224 MCM2P49736 904 aa23.56■■□□□ 1.36
RNF4-205ENST00000504224 ARPP19P56211 112 aa23.56■■□□□ 1.36
RNF4-205ENST00000504224 SOX4Q06945 474 aaPredicted RBP23.56■■□□□ 1.36
RNF4-205ENST00000504224 SNW1Q13573 536 aaKnown RBP23.56■■□□□ 1.36
RNF4-205ENST00000504224 DAW1Q8N136 415 aa23.56■■□□□ 1.36
RNF4-205ENST00000504224 SNX27Q96L92 541 aa23.56■■□□□ 1.36
RNF4-205ENST00000504224 MRPS23Q9Y3D9 190 aaKnown RBP23.56■■□□□ 1.36
RNF4-205ENST00000504224 R4GN57 208 aa23.56■■□□□ 1.36
RNF4-205ENST00000504224 PTPRZ1P23471 2315 aaPredicted RBP23.56■■□□□ 1.36
RNF4-205ENST00000504224 MYO15AQ9UKN7 3530 aa23.55■■□□□ 1.36
RNF4-205ENST00000504224 PODXLO00592 558 aa23.55■■□□□ 1.36
RNF4-205ENST00000504224 POU2F2P09086 479 aa23.55■■□□□ 1.36
RNF4-205ENST00000504224 ELF1P32519 619 aa23.55■■□□□ 1.36
RNF4-205ENST00000504224 DTHD1Q6ZMT9 781 aa23.55■■□□□ 1.36
RNF4-205ENST00000504224 TAS1R3Q7RTX0 852 aa23.55■■□□□ 1.36
RNF4-205ENST00000504224 NPAS3Q8IXF0 933 aa23.55■■□□□ 1.36
RNF4-205ENST00000504224 PJA1Q8NG27 643 aa23.55■■□□□ 1.36
RNF4-205ENST00000504224 ACAP3Q96P50 834 aa23.55■■□□□ 1.36
RNF4-205ENST00000504224 PTPRHQ9HD43 1115 aa23.55■■□□□ 1.36
RNF4-205ENST00000504224 KCNH3Q9ULD8 1083 aa23.55■■□□□ 1.36
RNF4-205ENST00000504224 RBM19Q9Y4C8 960 aaKnown RBP23.55■■□□□ 1.36
RNF4-205ENST00000504224 NUB1Q9Y5A7 615 aa23.55■■□□□ 1.36
RNF4-205ENST00000504224 VWA8A3KMH1 1905 aa23.55■■□□□ 1.36
RNF4-205ENST00000504224 SFI1A8K8P3 1242 aa23.54■■□□□ 1.36
RNF4-205ENST00000504224 LAD1O00515 517 aa23.54■■□□□ 1.36
RNF4-205ENST00000504224 PRRG1O14668 218 aa23.54■■□□□ 1.36
RNF4-205ENST00000504224 SLC16A4O15374 487 aa23.54■■□□□ 1.36
RNF4-205ENST00000504224 MCF2P10911 925 aa23.54■■□□□ 1.36
RNF4-205ENST00000504224 STARD6P59095 220 aa23.54■■□□□ 1.36
RNF4-205ENST00000504224 IL17AQ16552 155 aa23.54■■□□□ 1.36
RNF4-205ENST00000504224 VARS2Q5ST30 1063 aaKnown RBP23.54■■□□□ 1.36
RNF4-205ENST00000504224 MCTP1Q6DN14 999 aa23.54■■□□□ 1.36
RNF4-205ENST00000504224 RINT1Q6NUQ1 792 aa23.54■■□□□ 1.36
RNF4-205ENST00000504224 ALKAL1Q6UXT8 129 aa23.54■■□□□ 1.36
RNF4-205ENST00000504224 RTL10Q7L3V2 364 aa23.54■■□□□ 1.36
RNF4-205ENST00000504224 C1orf210Q8IVY1 113 aa23.54■■□□□ 1.36
RNF4-205ENST00000504224 MCRS1Q96EZ8 462 aa23.54■■□□□ 1.36
RNF4-205ENST00000504224 ZMAT2Q96NC0 199 aaKnown RBP23.54■■□□□ 1.36
RNF4-205ENST00000504224 DLGAP2Q9P1A6 1054 aa23.54■■□□□ 1.36
RNF4-205ENST00000504224 ARHGAP28Q9P2N2 729 aa23.54■■□□□ 1.36
RNF4-205ENST00000504224 DOCK6Q96HP0 2047 aa23.54■■□□□ 1.36
RNF4-205ENST00000504224 LRRN2O75325 713 aa23.53■■□□□ 1.36
RNF4-205ENST00000504224 LRG1P02750 347 aa23.53■■□□□ 1.36
RNF4-205ENST00000504224 RHOP08100 348 aa23.53■■□□□ 1.36
RNF4-205ENST00000504224 ROR1Q01973 937 aa23.53■■□□□ 1.36
RNF4-205ENST00000504224 RAD51AP2Q09MP3 1159 aa23.53■■□□□ 1.36
RNF4-205ENST00000504224 MLF2Q15773 248 aaPredicted RBP23.53■■□□□ 1.36
RNF4-205ENST00000504224 SLC44A4Q53GD3 710 aa23.53■■□□□ 1.36
RNF4-205ENST00000504224 XKR4Q5GH76 650 aa23.53■■□□□ 1.36
RNF4-205ENST00000504224 MPZL3Q6UWV2 235 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms