RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 TMPRSS11EQ9UL52 423 aa3.23□□□□□ -1.89
HMGB1P35-201ENST00000503360 SYNPO2Q9UMS6 1093 aa3.23□□□□□ -1.89
HMGB1P35-201ENST00000503360 USP18Q9UMW8 372 aa3.23□□□□□ -1.89
HMGB1P35-201ENST00000503360 LUC7L2Q9Y383 392 aaKnown RBP3.23□□□□□ -1.89
HMGB1P35-201ENST00000503360 PCDHGA9Q9Y5G4 932 aaKnown RBP3.23□□□□□ -1.89
HMGB1P35-201ENST00000503360 PCDHGA8Q9Y5G5 932 aa3.23□□□□□ -1.89
HMGB1P35-201ENST00000503360 PCDHGA7Q9Y5G6 932 aa3.23□□□□□ -1.89
HMGB1P35-201ENST00000503360 PCDHGA6Q9Y5G7 932 aa3.23□□□□□ -1.89
HMGB1P35-201ENST00000503360 PCDHGA3Q9Y5H0 932 aa3.23□□□□□ -1.89
HMGB1P35-201ENST00000503360 PCDHGA2Q9Y5H1 932 aa3.23□□□□□ -1.89
HMGB1P35-201ENST00000503360 MRFAP1Q9Y605 127 aa3.23□□□□□ -1.89
HMGB1P35-201ENST00000503360 KAT6AQ92794 2004 aa3.22□□□□□ -1.89
HMGB1P35-201ENST00000503360 A0A0A6YYJ9 748 aa3.22□□□□□ -1.89
HMGB1P35-201ENST00000503360 E2F8A0AVK6 867 aa3.22□□□□□ -1.89
HMGB1P35-201ENST00000503360 KLHL33A6NCF5 533 aa3.22□□□□□ -1.89
HMGB1P35-201ENST00000503360 OPHN1O60890 802 aa3.22□□□□□ -1.89
HMGB1P35-201ENST00000503360 FSBPO95073 299 aa3.22□□□□□ -1.89
HMGB1P35-201ENST00000503360 IGLV2-14P01704 120 aa3.22□□□□□ -1.89
HMGB1P35-201ENST00000503360 CT47B1P0C2W7 299 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P35-201ENST00000503360 OSMP13725 252 aa3.22□□□□□ -1.89
HMGB1P35-201ENST00000503360 MTHFD2P13995 350 aa3.22□□□□□ -1.89
HMGB1P35-201ENST00000503360 ZSCAN20P17040 1043 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P35-201ENST00000503360 HK1P19367 917 aa3.22□□□□□ -1.89
HMGB1P35-201ENST00000503360 MPLP40238 635 aa3.22□□□□□ -1.89
HMGB1P35-201ENST00000503360 RECQLP46063 649 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P35-201ENST00000503360 KRT85P78386 507 aa3.22□□□□□ -1.89
HMGB1P35-201ENST00000503360 FAM189BP81408 668 aa3.22□□□□□ -1.89
HMGB1P35-201ENST00000503360 MRPS9P82933 396 aaKnown RBP3.22□□□□□ -1.89
HMGB1P35-201ENST00000503360 CDK17Q00537 523 aa3.22□□□□□ -1.89
HMGB1P35-201ENST00000503360 PPARAQ07869 468 aa3.22□□□□□ -1.89
HMGB1P35-201ENST00000503360 MPP3Q13368 585 aa3.22□□□□□ -1.89
HMGB1P35-201ENST00000503360 PIN1Q13526 163 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P35-201ENST00000503360 PPP2R5AQ15172 486 aa3.22□□□□□ -1.89
HMGB1P35-201ENST00000503360 LRRC41Q15345 812 aa3.22□□□□□ -1.89
HMGB1P35-201ENST00000503360 EFCAB2Q5VUJ9 269 aa3.22□□□□□ -1.89
HMGB1P35-201ENST00000503360 KIAA1614Q5VZ46 1190 aa3.22□□□□□ -1.89
HMGB1P35-201ENST00000503360 GPRIN1Q7Z2K8 1008 aa3.22□□□□□ -1.89
HMGB1P35-201ENST00000503360 KCNK18Q7Z418 384 aa3.22□□□□□ -1.89
HMGB1P35-201ENST00000503360 FMNL3Q8IVF7 1028 aa3.22□□□□□ -1.89
HMGB1P35-201ENST00000503360 CMTR2Q8IYT2 770 aaKnown RBP3.22□□□□□ -1.89
HMGB1P35-201ENST00000503360 CDYL2Q8N8U2 506 aa3.22□□□□□ -1.89
HMGB1P35-201ENST00000503360 PPP1R14CQ8TAE6 165 aa3.22□□□□□ -1.89
HMGB1P35-201ENST00000503360 GAB3Q8WWW8 586 aa3.22□□□□□ -1.89
HMGB1P35-201ENST00000503360 SLC2A13Q96QE2 648 aa3.22□□□□□ -1.89
HMGB1P35-201ENST00000503360 RTFDC1Q9BY42 306 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P35-201ENST00000503360 CDH19Q9H159 772 aa3.22□□□□□ -1.89
HMGB1P35-201ENST00000503360 ANKFY1Q9P2R3 1169 aa3.22□□□□□ -1.89
HMGB1P35-201ENST00000503360 PRSS50Q9UI38 385 aa3.22□□□□□ -1.89
HMGB1P35-201ENST00000503360 ZNF180Q9UJW8 692 aa3.22□□□□□ -1.89
HMGB1P35-201ENST00000503360 PCDHB6Q9Y5E3 794 aa3.22□□□□□ -1.89
HMGB1P35-201ENST00000503360 GPR45Q9Y5Y3 372 aa3.22□□□□□ -1.89
HMGB1P35-201ENST00000503360 MARCH11A6NNE9 402 aa3.21□□□□□ -1.9
HMGB1P35-201ENST00000503360 TSPAN6O43657 245 aa3.21□□□□□ -1.9
HMGB1P35-201ENST00000503360 STC2O76061 302 aa3.21□□□□□ -1.9
HMGB1P35-201ENST00000503360 ABLIM3O94929 683 aa3.21□□□□□ -1.9
HMGB1P35-201ENST00000503360 SCGB1D2O95969 90 aa3.21□□□□□ -1.9
HMGB1P35-201ENST00000503360 AGXTP21549 392 aa3.21□□□□□ -1.9
HMGB1P35-201ENST00000503360 MTNR1BP49286 362 aa3.21□□□□□ -1.9
HMGB1P35-201ENST00000503360 SLC5A3P53794 718 aa3.21□□□□□ -1.9
HMGB1P35-201ENST00000503360 CCT2P78371 535 aaKnown RBP3.21□□□□□ -1.9
HMGB1P35-201ENST00000503360 MRPL49Q13405 166 aaKnown RBP3.21□□□□□ -1.9
HMGB1P35-201ENST00000503360 MUM1Q2TAK8 710 aa3.21□□□□□ -1.9
HMGB1P35-201ENST00000503360 LCE1EQ5T753 118 aa3.21□□□□□ -1.9
HMGB1P35-201ENST00000503360 SLC41A1Q8IVJ1 513 aa3.21□□□□□ -1.9
HMGB1P35-201ENST00000503360 WDR75Q8IWA0 830 aaKnown RBP3.21□□□□□ -1.9
HMGB1P35-201ENST00000503360 CHPFQ8IZ52 775 aa3.21□□□□□ -1.9
HMGB1P35-201ENST00000503360 UNC5BQ8IZJ1 945 aa3.21□□□□□ -1.9
HMGB1P35-201ENST00000503360 CPA6Q8N4T0 437 aa3.21□□□□□ -1.9
HMGB1P35-201ENST00000503360 PPM1NQ8N819 430 aa3.21□□□□□ -1.9
HMGB1P35-201ENST00000503360 ZNF366Q8N895 744 aa3.21□□□□□ -1.9
HMGB1P35-201ENST00000503360 OR14C36Q8NHC7 312 aa3.21□□□□□ -1.9
HMGB1P35-201ENST00000503360 TSPEARQ8WU66 669 aa3.21□□□□□ -1.9
HMGB1P35-201ENST00000503360 RSAD2Q8WXG1 361 aa3.21□□□□□ -1.9
HMGB1P35-201ENST00000503360 JPH3Q8WXH2 748 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P35-201ENST00000503360 AUTS2Q8WXX7 1259 aa3.21□□□□□ -1.9
HMGB1P35-201ENST00000503360 JADE3Q92613 823 aa3.21□□□□□ -1.9
HMGB1P35-201ENST00000503360 TSR2Q969E8 191 aaKnown RBP3.21□□□□□ -1.9
HMGB1P35-201ENST00000503360 FUBP1Q96AE4 644 aaKnown RBP3.21□□□□□ -1.9
HMGB1P35-201ENST00000503360 HIST1H2AHQ96KK5 128 aa3.21□□□□□ -1.9
HMGB1P35-201ENST00000503360 TEKT5Q96M29 485 aa3.21□□□□□ -1.9
HMGB1P35-201ENST00000503360 HIST1H2AJQ99878 128 aa3.21□□□□□ -1.9
HMGB1P35-201ENST00000503360 CPEB1Q9BZB8 566 aaKnown RBP3.21□□□□□ -1.9
HMGB1P35-201ENST00000503360 IFT122Q9HBG6 1241 aa3.21□□□□□ -1.9
HMGB1P35-201ENST00000503360 ZNF277Q9NRM2 450 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P35-201ENST00000503360 TRPM5Q9NZQ8 1165 aa3.21□□□□□ -1.9
HMGB1P35-201ENST00000503360 EVLQ9UI08 416 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P35-201ENST00000503360 DNAI1Q9UI46 699 aa3.21□□□□□ -1.9
HMGB1P35-201ENST00000503360 CDY2AQ9Y6F7 541 aa3.21□□□□□ -1.9
HMGB1P35-201ENST00000503360 NCR1O76036 304 aa3.2□□□□□ -1.9
HMGB1P35-201ENST00000503360 NDUFA10O95299 355 aa3.2□□□□□ -1.9
HMGB1P35-201ENST00000503360 SPATA31D3P0C874 917 aa3.2□□□□□ -1.9
HMGB1P35-201ENST00000503360 PF4V1P10720 104 aa3.2□□□□□ -1.9
HMGB1P35-201ENST00000503360 XPAP23025 273 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P35-201ENST00000503360 APOBEC3AP31941 199 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P35-201ENST00000503360 GPR15P49685 360 aa3.2□□□□□ -1.9
HMGB1P35-201ENST00000503360 RARRES1P49788 294 aa3.2□□□□□ -1.9
HMGB1P35-201ENST00000503360 TMEM240Q5SV17 173 aa3.2□□□□□ -1.9
HMGB1P35-201ENST00000503360 SPATA31D4Q6ZUB0 917 aa3.2□□□□□ -1.9
HMGB1P35-201ENST00000503360 SSH1Q8WYL5 1049 aa3.2□□□□□ -1.9
HMGB1P35-201ENST00000503360 CAMKK2Q96RR4 588 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms