RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 TCEAL9Q9UHQ7 104 aa7.5□□□□□ -1.21
NIPBL-203ENST00000503274 RUVBL1Q9Y265 456 aaKnown RBP7.5□□□□□ -1.21
NIPBL-203ENST00000503274 ZNF608Q9ULD9 1512 aaPredicted RBP7.49□□□□□ -1.21
NIPBL-203ENST00000503274 CYP2C19P33261 490 aa7.49□□□□□ -1.21
NIPBL-203ENST00000503274 RAP2BP61225 183 aa7.49□□□□□ -1.21
NIPBL-203ENST00000503274 DSC2Q02487 901 aa7.49□□□□□ -1.21
NIPBL-203ENST00000503274 RAB39AQ14964 217 aa7.49□□□□□ -1.21
NIPBL-203ENST00000503274 SEM1Q6ZVN7 128 aa7.49□□□□□ -1.21
NIPBL-203ENST00000503274 CATIPQ7Z7H3 387 aa7.49□□□□□ -1.21
NIPBL-203ENST00000503274 RNF169Q8NCN4 708 aa7.49□□□□□ -1.21
NIPBL-203ENST00000503274 OR10H5Q8NGA6 315 aa7.49□□□□□ -1.21
NIPBL-203ENST00000503274 IFI44Q8TCB0 444 aa7.49□□□□□ -1.21
NIPBL-203ENST00000503274 MRGPRX4Q96LA9 322 aa7.49□□□□□ -1.21
NIPBL-203ENST00000503274 GTPBP4Q9BZE4 634 aaKnown RBP7.49□□□□□ -1.21
NIPBL-203ENST00000503274 METTL14Q9HCE5 456 aaKnown RBP7.49□□□□□ -1.21
NIPBL-203ENST00000503274 SLC23A1Q9UHI7 598 aa7.49□□□□□ -1.21
NIPBL-203ENST00000503274 PNPLA7Q6ZV29 1317 aa7.49□□□□□ -1.21
NIPBL-203ENST00000503274 PPP2R5AQ15172 486 aa7.48□□□□□ -1.21
NIPBL-203ENST00000503274 ATP2B3Q16720 1220 aa7.48□□□□□ -1.21
NIPBL-203ENST00000503274 RNF207Q6ZRF8 634 aa7.48□□□□□ -1.21
NIPBL-203ENST00000503274 PLXDC1Q8IUK5 500 aa7.48□□□□□ -1.21
NIPBL-203ENST00000503274 CHPFQ8IZ52 775 aa7.48□□□□□ -1.21
NIPBL-203ENST00000503274 NSUN6Q8TEA1 469 aaKnown RBP7.48□□□□□ -1.21
NIPBL-203ENST00000503274 DMRTA2Q96SC8 542 aa7.48□□□□□ -1.21
NIPBL-203ENST00000503274 MYOCQ99972 504 aa7.48□□□□□ -1.21
NIPBL-203ENST00000503274 NDC1Q9BTX1 674 aa7.48□□□□□ -1.21
NIPBL-203ENST00000503274 CALCOCO1Q9P1Z2 691 aa7.48□□□□□ -1.21
NIPBL-203ENST00000503274 SOGA1O94964 1423 aa7.47□□□□□ -1.21
NIPBL-203ENST00000503274 POMCP01189 267 aa7.47□□□□□ -1.21
NIPBL-203ENST00000503274 CREMQ03060 361 aa7.47□□□□□ -1.21
NIPBL-203ENST00000503274 ZNF529Q6P280 563 aa7.47□□□□□ -1.21
NIPBL-203ENST00000503274 GADL1Q6ZQY3 521 aa7.47□□□□□ -1.21
NIPBL-203ENST00000503274 SPRED1Q7Z699 444 aa7.47□□□□□ -1.21
NIPBL-203ENST00000503274 SYT12Q8IV01 421 aa7.47□□□□□ -1.21
NIPBL-203ENST00000503274 TPH2Q8IWU9 490 aa7.47□□□□□ -1.21
NIPBL-203ENST00000503274 C11orf54Q9H0W9 315 aaPredicted RBP7.47□□□□□ -1.21
NIPBL-203ENST00000503274 ZNF703Q9H7S9 590 aaPredicted RBP7.47□□□□□ -1.21
NIPBL-203ENST00000503274 PARPBPQ9NWS1 579 aa7.47□□□□□ -1.21
NIPBL-203ENST00000503274 FAM30AQ9NZY2 134 aa7.47□□□□□ -1.21
NIPBL-203ENST00000503274 KLHL42Q9P2K6 505 aa7.47□□□□□ -1.21
NIPBL-203ENST00000503274 DRGXA6NNA5 263 aa7.46□□□□□ -1.22
NIPBL-203ENST00000503274 GRXCR1A8MXD5 290 aa7.46□□□□□ -1.22
NIPBL-203ENST00000503274 OFD1O75665 1012 aa7.46□□□□□ -1.22
NIPBL-203ENST00000503274 SCGB1D2O95969 90 aa7.46□□□□□ -1.22
NIPBL-203ENST00000503274 AMHP03971 560 aa7.46□□□□□ -1.22
NIPBL-203ENST00000503274 ZNF280AP59817 542 aaPredicted RBP7.46□□□□□ -1.22
NIPBL-203ENST00000503274 TLE1Q04724 770 aa7.46□□□□□ -1.22
NIPBL-203ENST00000503274 TOB2Q14106 344 aaPredicted RBP7.46□□□□□ -1.22
NIPBL-203ENST00000503274 UBXN2BQ14CS0 331 aa7.46□□□□□ -1.22
NIPBL-203ENST00000503274 LRRC41Q15345 812 aa7.46□□□□□ -1.22
NIPBL-203ENST00000503274 PGS1Q32NB8 556 aa7.46□□□□□ -1.22
NIPBL-203ENST00000503274 RABL3Q5HYI8 236 aa7.46□□□□□ -1.22
NIPBL-203ENST00000503274 ATAT1Q5SQI0 421 aa7.46□□□□□ -1.22
NIPBL-203ENST00000503274 DACT2Q5SW24 774 aa7.46□□□□□ -1.22
NIPBL-203ENST00000503274 IFIT1BQ5T764 474 aaKnown RBP7.46□□□□□ -1.22
NIPBL-203ENST00000503274 THEMIS2Q5TEJ8 643 aa7.46□□□□□ -1.22
NIPBL-203ENST00000503274 HPS3Q969F9 1004 aa7.46□□□□□ -1.22
NIPBL-203ENST00000503274 MVB12AQ96EY5 273 aa7.46□□□□□ -1.22
NIPBL-203ENST00000503274 AIFM3Q96NN9 605 aa7.46□□□□□ -1.22
NIPBL-203ENST00000503274 MAP3K14Q99558 947 aa7.46□□□□□ -1.22
NIPBL-203ENST00000503274 MAN1C1Q9NR34 630 aa7.46□□□□□ -1.22
NIPBL-203ENST00000503274 CEP72Q9P209 647 aa7.46□□□□□ -1.22
NIPBL-203ENST00000503274 EIF2B4Q9UI10 523 aaKnown RBP7.46□□□□□ -1.22
NIPBL-203ENST00000503274 SORCS3Q9UPU3 1222 aa7.46□□□□□ -1.22
NIPBL-203ENST00000503274 MYRFQ9Y2G1 1151 aa7.46□□□□□ -1.22
NIPBL-203ENST00000503274 AQRO60306 1485 aaKnown RBP eCLIP7.46□□□□□ -1.22
NIPBL-203ENST00000503274 POLA1P09884 1462 aaPredicted RBP7.45□□□□□ -1.22
NIPBL-203ENST00000503274 LEFTY2O00292 366 aa7.45□□□□□ -1.22
NIPBL-203ENST00000503274 RECQL4O94761 1208 aa7.45□□□□□ -1.22
NIPBL-203ENST00000503274 INSRRP14616 1297 aa7.45□□□□□ -1.22
NIPBL-203ENST00000503274 APOBEC3AP31941 199 aaPredicted RBP7.45□□□□□ -1.22
NIPBL-203ENST00000503274 FXR1P51114 621 aaKnown RBP eCLIP7.45□□□□□ -1.22
NIPBL-203ENST00000503274 NHLH2Q02577 135 aa7.45□□□□□ -1.22
NIPBL-203ENST00000503274 GTF2H3Q13889 308 aa7.45□□□□□ -1.22
NIPBL-203ENST00000503274 KHDC1Q4VXA5 237 aaKnown RBP7.45□□□□□ -1.22
NIPBL-203ENST00000503274 UBE3BQ7Z3V4 1068 aa7.45□□□□□ -1.22
NIPBL-203ENST00000503274 DCBLD1Q8N8Z6 715 aa7.45□□□□□ -1.22
NIPBL-203ENST00000503274 PLEKHG4BQ96PX9 1271 aa7.45□□□□□ -1.22
NIPBL-203ENST00000503274 DCLRE1CQ96SD1 692 aaKnown RBP7.45□□□□□ -1.22
NIPBL-203ENST00000503274 VRK1Q99986 396 aaPredicted RBP7.45□□□□□ -1.22
NIPBL-203ENST00000503274 SLC12A5Q9H2X9 1139 aa7.45□□□□□ -1.22
NIPBL-203ENST00000503274 POLHQ9Y253 713 aa7.45□□□□□ -1.22
NIPBL-203ENST00000503274 EIF4G3O43432 1585 aaKnown RBP7.45□□□□□ -1.22
NIPBL-203ENST00000503274 TCRBV7S2A1N4TA0A589 114 aa7.44□□□□□ -1.22
NIPBL-203ENST00000503274 KIAA0391O15091 583 aaKnown RBP7.44□□□□□ -1.22
NIPBL-203ENST00000503274 TRIM24O15164 1050 aa7.44□□□□□ -1.22
NIPBL-203ENST00000503274 SLC16A6O15403 523 aa7.44□□□□□ -1.22
NIPBL-203ENST00000503274 AP1G1O43747 822 aa7.44□□□□□ -1.22
NIPBL-203ENST00000503274 U2AF1L5P0DN76 240 aaPredicted RBP7.44□□□□□ -1.22
NIPBL-203ENST00000503274 ALAS1P13196 640 aa7.44□□□□□ -1.22
NIPBL-203ENST00000503274 HSPA6P17066 643 aa7.44□□□□□ -1.22
NIPBL-203ENST00000503274 CHN2P52757 468 aa7.44□□□□□ -1.22
NIPBL-203ENST00000503274 U2AF1Q01081 240 aaKnown RBP eCLIP7.44□□□□□ -1.22
NIPBL-203ENST00000503274 FAM102BQ5T8I3 360 aa7.44□□□□□ -1.22
NIPBL-203ENST00000503274 CXorf57Q6NSI4 855 aaKnown RBP7.44□□□□□ -1.22
NIPBL-203ENST00000503274 MED25Q71SY5 747 aa7.44□□□□□ -1.22
NIPBL-203ENST00000503274 C3orf20Q8ND61 904 aa7.44□□□□□ -1.22
NIPBL-203ENST00000503274 CPT1CQ8TCG5 803 aa7.44□□□□□ -1.22
NIPBL-203ENST00000503274 RGMAQ96B86 450 aa7.44□□□□□ -1.22
NIPBL-203ENST00000503274 PHACTR3Q96KR7 559 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms