RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 CD300LGQ6UXG3 332 aa6.72□□□□□ -1.33
LSM3P4-201ENST00000502948 GET4Q7L5D6 327 aaPredicted RBP6.72□□□□□ -1.33
LSM3P4-201ENST00000502948 GRASPQ7Z6J2 395 aaPredicted RBP6.72□□□□□ -1.33
LSM3P4-201ENST00000502948 TCEAL8Q8IYN2 117 aa6.72□□□□□ -1.33
LSM3P4-201ENST00000502948 C4orf32Q8N8J7 132 aa6.72□□□□□ -1.33
LSM3P4-201ENST00000502948 ZBTB44Q8NCP5 570 aa6.72□□□□□ -1.33
LSM3P4-201ENST00000502948 FBXO18Q8NFZ0 1043 aa6.72□□□□□ -1.33
LSM3P4-201ENST00000502948 RUBCNQ92622 972 aa6.72□□□□□ -1.33
LSM3P4-201ENST00000502948 FGF14Q92915 247 aa6.72□□□□□ -1.33
LSM3P4-201ENST00000502948 IFT74Q96LB3 600 aa6.72□□□□□ -1.33
LSM3P4-201ENST00000502948 TSPAN18Q96SJ8 248 aa6.72□□□□□ -1.33
LSM3P4-201ENST00000502948 PAAF1Q9BRP4 392 aa6.72□□□□□ -1.33
LSM3P4-201ENST00000502948 APOL6Q9BWW8 343 aa6.72□□□□□ -1.33
LSM3P4-201ENST00000502948 RAB34Q9BZG1 259 aa6.72□□□□□ -1.33
LSM3P4-201ENST00000502948 TMEM60Q9H2L4 133 aa6.72□□□□□ -1.33
LSM3P4-201ENST00000502948 GPRC5CQ9NQ84 441 aa6.72□□□□□ -1.33
LSM3P4-201ENST00000502948 TOPORSQ9NS56 1045 aaPredicted RBP6.72□□□□□ -1.33
LSM3P4-201ENST00000502948 SNTG2Q9NY99 539 aa6.72□□□□□ -1.33
LSM3P4-201ENST00000502948 DLL3Q9NYJ7 618 aa6.72□□□□□ -1.33
LSM3P4-201ENST00000502948 KCND2Q9NZV8 630 aa6.72□□□□□ -1.33
LSM3P4-201ENST00000502948 ARHGAP28Q9P2N2 729 aa6.72□□□□□ -1.33
LSM3P4-201ENST00000502948 PCDHGA2Q9Y5H1 932 aa6.72□□□□□ -1.33
LSM3P4-201ENST00000502948 GVINP1Q7Z2Y8 2422 aa6.72□□□□□ -1.33
LSM3P4-201ENST00000502948 CACNA1AO00555 2505 aa6.71□□□□□ -1.34
LSM3P4-201ENST00000502948 SMIM28A0A1B0GU29 152 aa6.71□□□□□ -1.34
LSM3P4-201ENST00000502948 ARHGEF35A5YM69 484 aa6.71□□□□□ -1.34
LSM3P4-201ENST00000502948 CASTOR2A6NHX0 329 aa6.71□□□□□ -1.34
LSM3P4-201ENST00000502948 TTLL13PA6NNM8 815 aa6.71□□□□□ -1.34
LSM3P4-201ENST00000502948 K7ERI5 159 aa6.71□□□□□ -1.34
LSM3P4-201ENST00000502948 SLC26A4O43511 780 aa6.71□□□□□ -1.34
LSM3P4-201ENST00000502948 LILRB5O75023 590 aa6.71□□□□□ -1.34
LSM3P4-201ENST00000502948 B3GAT3O94766 335 aa6.71□□□□□ -1.34
LSM3P4-201ENST00000502948 SPATA31D3P0C874 917 aa6.71□□□□□ -1.34
LSM3P4-201ENST00000502948 GLULP15104 373 aa6.71□□□□□ -1.34
LSM3P4-201ENST00000502948 PTPN2P17706 415 aa6.71□□□□□ -1.34
LSM3P4-201ENST00000502948 RPL17P18621 184 aaKnown RBP6.71□□□□□ -1.34
LSM3P4-201ENST00000502948 U2AF2P26368 475 aaKnown RBP eCLIP6.71□□□□□ -1.34
LSM3P4-201ENST00000502948 OR1D2P34982 312 aa6.71□□□□□ -1.34
LSM3P4-201ENST00000502948 CLCNKBP51801 687 aa6.71□□□□□ -1.34
LSM3P4-201ENST00000502948 NEK4P51957 841 aa6.71□□□□□ -1.34
LSM3P4-201ENST00000502948 EPHA5P54756 1037 aa6.71□□□□□ -1.34
LSM3P4-201ENST00000502948 GPC5P78333 572 aa6.71□□□□□ -1.34
LSM3P4-201ENST00000502948 MLF2Q15773 248 aaPredicted RBP6.71□□□□□ -1.34
LSM3P4-201ENST00000502948 PABPC1LQ4VXU2 614 aaKnown RBP6.71□□□□□ -1.34
LSM3P4-201ENST00000502948 SLC44A4Q53GD3 710 aa6.71□□□□□ -1.34
LSM3P4-201ENST00000502948 PRSS36Q5K4E3 855 aa6.71□□□□□ -1.34
LSM3P4-201ENST00000502948 ATF7IP2Q5U623 682 aa6.71□□□□□ -1.34
LSM3P4-201ENST00000502948 PARM1Q6UWI2 310 aa6.71□□□□□ -1.34
LSM3P4-201ENST00000502948 SPATA31D4Q6ZUB0 917 aa6.71□□□□□ -1.34
LSM3P4-201ENST00000502948 CDR2LQ86X02 465 aaPredicted RBP6.71□□□□□ -1.34
LSM3P4-201ENST00000502948 NOSTRINQ8IVI9 506 aa6.71□□□□□ -1.34
LSM3P4-201ENST00000502948 NPAS3Q8IXF0 933 aa6.71□□□□□ -1.34
LSM3P4-201ENST00000502948 MAML2Q8IZL2 1156 aaPredicted RBP6.71□□□□□ -1.34
LSM3P4-201ENST00000502948 SUMF1Q8NBK3 374 aa6.71□□□□□ -1.34
LSM3P4-201ENST00000502948 DEPTORQ8TB45 409 aa6.71□□□□□ -1.34
LSM3P4-201ENST00000502948 SPIRE2Q8WWL2 714 aa6.71□□□□□ -1.34
LSM3P4-201ENST00000502948 BSNDQ8WZ55 320 aa6.71□□□□□ -1.34
LSM3P4-201ENST00000502948 E2F7Q96AV8 911 aa6.71□□□□□ -1.34
LSM3P4-201ENST00000502948 ELSPBP1Q96BH3 223 aa6.71□□□□□ -1.34
LSM3P4-201ENST00000502948 MSANTD3Q96H12 275 aa6.71□□□□□ -1.34
LSM3P4-201ENST00000502948 B3GALT6Q96L58 329 aa6.71□□□□□ -1.34
LSM3P4-201ENST00000502948 DRC1Q96MC2 740 aa6.71□□□□□ -1.34
LSM3P4-201ENST00000502948 BCO2Q9BYV7 579 aa6.71□□□□□ -1.34
LSM3P4-201ENST00000502948 GPR88Q9GZN0 384 aa6.71□□□□□ -1.34
LSM3P4-201ENST00000502948 TRPV4Q9HBA0 871 aa6.71□□□□□ -1.34
LSM3P4-201ENST00000502948 KLK14Q9P0G3 267 aa6.71□□□□□ -1.34
LSM3P4-201ENST00000502948 CNTN3Q9P232 1028 aa6.71□□□□□ -1.34
LSM3P4-201ENST00000502948 DNMT3BQ9UBC3 853 aaKnown RBP6.71□□□□□ -1.34
LSM3P4-201ENST00000502948 HSFX1Q9UBD0 423 aa6.71□□□□□ -1.34
LSM3P4-201ENST00000502948 CA14Q9ULX7 337 aa6.71□□□□□ -1.34
LSM3P4-201ENST00000502948 MRPS17Q9Y2R5 130 aaKnown RBP6.71□□□□□ -1.34
LSM3P4-201ENST00000502948 ZNF292O60281 2723 aa6.71□□□□□ -1.34
LSM3P4-201ENST00000502948 SPTBN4Q9H254 2564 aa6.71□□□□□ -1.34
LSM3P4-201ENST00000502948 OTOGLQ3ZCN5 2332 aa6.71□□□□□ -1.34
LSM3P4-201ENST00000502948 NUP210Q8TEM1 1887 aaPredicted RBP6.7□□□□□ -1.34
LSM3P4-201ENST00000502948 H7C4K7 107 aa6.7□□□□□ -1.34
LSM3P4-201ENST00000502948 MAN2B1O00754 1011 aa6.7□□□□□ -1.34
LSM3P4-201ENST00000502948 ABLIM1O14639 778 aa6.7□□□□□ -1.34
LSM3P4-201ENST00000502948 ZNF197O14709 1029 aa6.7□□□□□ -1.34
LSM3P4-201ENST00000502948 KINO60870 393 aaKnown RBP6.7□□□□□ -1.34
LSM3P4-201ENST00000502948 LARGE1O95461 756 aa6.7□□□□□ -1.34
LSM3P4-201ENST00000502948 EDN1P05305 212 aa6.7□□□□□ -1.34
LSM3P4-201ENST00000502948 MCF2P10911 925 aa6.7□□□□□ -1.34
LSM3P4-201ENST00000502948 CYP3A5P20815 502 aa6.7□□□□□ -1.34
LSM3P4-201ENST00000502948 RFX1P22670 979 aa6.7□□□□□ -1.34
LSM3P4-201ENST00000502948 GUCY2CP25092 1073 aa6.7□□□□□ -1.34
LSM3P4-201ENST00000502948 ABCD1P33897 745 aa6.7□□□□□ -1.34
LSM3P4-201ENST00000502948 MCM7P33993 719 aa6.7□□□□□ -1.34
LSM3P4-201ENST00000502948 YARSP54577 528 aaKnown RBP6.7□□□□□ -1.34
LSM3P4-201ENST00000502948 ROR1Q01973 937 aa6.7□□□□□ -1.34
LSM3P4-201ENST00000502948 ST3GAL1Q11201 340 aa6.7□□□□□ -1.34
LSM3P4-201ENST00000502948 PUM1Q14671 1186 aaKnown RBP eCLIP6.7□□□□□ -1.34
LSM3P4-201ENST00000502948 ZBTB41Q5SVQ8 909 aa6.7□□□□□ -1.34
LSM3P4-201ENST00000502948 HYIQ5T013 277 aa6.7□□□□□ -1.34
LSM3P4-201ENST00000502948 NT5DC1Q5TFE4 455 aa6.7□□□□□ -1.34
LSM3P4-201ENST00000502948 EEF1DP3Q658K8 133 aa6.7□□□□□ -1.34
LSM3P4-201ENST00000502948 ZPBP2Q6X784 338 aa6.7□□□□□ -1.34
LSM3P4-201ENST00000502948 ZNF687Q8N1G0 1237 aa6.7□□□□□ -1.34
LSM3P4-201ENST00000502948 NECAB1Q8N987 351 aa6.7□□□□□ -1.34
LSM3P4-201ENST00000502948 C3orf58Q8NDZ4 430 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms