RNA–Protein interactions for RNA: ENST00000502563.5

UBE2D3-212, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-212ENST00000502563 MARCH5Q9NX47 278 aa11.68□□□□□ -0.54
UBE2D3-212ENST00000502563 DNAJB4Q9UDY4 337 aa11.68□□□□□ -0.54
UBE2D3-212ENST00000502563 UBQLN1Q9UMX0 589 aaKnown RBP11.68□□□□□ -0.54
UBE2D3-212ENST00000502563 TRAF3IP3Q9Y228 551 aa11.68□□□□□ -0.54
UBE2D3-212ENST00000502563 SSX2IPQ9Y2D8 614 aa11.68□□□□□ -0.54
UBE2D3-212ENST00000502563 GDAQ9Y2T3 454 aa11.68□□□□□ -0.54
UBE2D3-212ENST00000502563 GOLGA6L22H0YM25 854 aa11.67□□□□□ -0.54
UBE2D3-212ENST00000502563 MAPK13O15264 365 aa11.67□□□□□ -0.54
UBE2D3-212ENST00000502563 GRM6O15303 877 aa11.67□□□□□ -0.54
UBE2D3-212ENST00000502563 MEFVO15553 781 aaPredicted RBP11.67□□□□□ -0.54
UBE2D3-212ENST00000502563 B4GALT3O60512 393 aa11.67□□□□□ -0.54
UBE2D3-212ENST00000502563 PRPF6O94906 941 aaKnown RBP11.67□□□□□ -0.54
UBE2D3-212ENST00000502563 SOD2P04179 222 aa11.67□□□□□ -0.54
UBE2D3-212ENST00000502563 CTSAP10619 480 aa11.67□□□□□ -0.54
UBE2D3-212ENST00000502563 CASP1P29466 404 aa11.67□□□□□ -0.54
UBE2D3-212ENST00000502563 SURF1Q15526 300 aa11.67□□□□□ -0.54
UBE2D3-212ENST00000502563 UPP1Q16831 310 aa11.67□□□□□ -0.54
UBE2D3-212ENST00000502563 ZNF658Q5TYW1 1059 aaPredicted RBP11.67□□□□□ -0.54
UBE2D3-212ENST00000502563 ARMCX5Q6P1M9 558 aa11.67□□□□□ -0.54
UBE2D3-212ENST00000502563 ZBTB33Q86T24 672 aa11.67□□□□□ -0.54
UBE2D3-212ENST00000502563 GPD1LQ8N335 351 aa11.67□□□□□ -0.54
UBE2D3-212ENST00000502563 TRIML1Q8N9V2 468 aa11.67□□□□□ -0.54
UBE2D3-212ENST00000502563 ZMAT2Q96NC0 199 aaKnown RBP11.67□□□□□ -0.54
UBE2D3-212ENST00000502563 APOL6Q9BWW8 343 aa11.67□□□□□ -0.54
UBE2D3-212ENST00000502563 ZBP1Q9H171 429 aa11.67□□□□□ -0.54
UBE2D3-212ENST00000502563 KCTD10Q9H3F6 313 aa11.67□□□□□ -0.54
UBE2D3-212ENST00000502563 CERS4Q9HA82 394 aa11.67□□□□□ -0.54
UBE2D3-212ENST00000502563 SLC39A2Q9NP94 309 aa11.67□□□□□ -0.54
UBE2D3-212ENST00000502563 CHST7Q9NS84 486 aa11.67□□□□□ -0.54
UBE2D3-212ENST00000502563 HCSTQ9UBK5 93 aa11.67□□□□□ -0.54
UBE2D3-212ENST00000502563 ADAM28Q9UKQ2 775 aa11.67□□□□□ -0.54
UBE2D3-212ENST00000502563 MTUS1Q9ULD2 1270 aa11.67□□□□□ -0.54
UBE2D3-212ENST00000502563 PLXNA4Q9HCM2 1894 aa11.67□□□□□ -0.54
UBE2D3-212ENST00000502563 PRRC2BQ5JSZ5 2229 aaKnown RBP11.67□□□□□ -0.54
UBE2D3-212ENST00000502563 SF3B1O75533 1304 aaKnown RBP eCLIP11.66□□□□□ -0.542e-6■■■■■ 52.4
UBE2D3-212ENST00000502563 GADD45BO75293 160 aaPredicted RBP11.66□□□□□ -0.54
UBE2D3-212ENST00000502563 CXCL8P10145 99 aa11.66□□□□□ -0.54
UBE2D3-212ENST00000502563 TNFSF9P41273 254 aa11.66□□□□□ -0.54
UBE2D3-212ENST00000502563 MATR3P43243 847 aaKnown RBP eCLIP11.66□□□□□ -0.54
UBE2D3-212ENST00000502563 CREMQ03060 361 aa11.66□□□□□ -0.54
UBE2D3-212ENST00000502563 EDRF1Q3B7T1 1238 aa11.66□□□□□ -0.54
UBE2D3-212ENST00000502563 SPATA1Q5VX52 437 aa11.66□□□□□ -0.54
UBE2D3-212ENST00000502563 ASTLQ6HA08 431 aaPredicted RBP11.66□□□□□ -0.54
UBE2D3-212ENST00000502563 PDXDC1Q6P996 788 aa11.66□□□□□ -0.54
UBE2D3-212ENST00000502563 DCLRE1AQ6PJP8 1040 aa11.66□□□□□ -0.54
UBE2D3-212ENST00000502563 TMEM184AQ6ZMB5 413 aa11.66□□□□□ -0.54
UBE2D3-212ENST00000502563 GLIS3Q8NEA6 775 aa11.66□□□□□ -0.54
UBE2D3-212ENST00000502563 MAFAQ8NHW3 353 aaPredicted RBP11.66□□□□□ -0.54
UBE2D3-212ENST00000502563 HPS3Q969F9 1004 aa11.66□□□□□ -0.54
UBE2D3-212ENST00000502563 SMARCE1Q969G3 411 aa11.66□□□□□ -0.54
UBE2D3-212ENST00000502563 CBWD1Q9BRT8 395 aa11.66□□□□□ -0.54
UBE2D3-212ENST00000502563 HERC2P3Q9BVR0 1158 aa11.66□□□□□ -0.54
UBE2D3-212ENST00000502563 ALG13Q9NP73 1137 aaKnown RBP11.66□□□□□ -0.54
UBE2D3-212ENST00000502563 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.66□□□□□ -0.54
UBE2D3-212ENST00000502563 DMAC2Q9NW81 257 aa11.66□□□□□ -0.54
UBE2D3-212ENST00000502563 HSPBP1Q9NZL4 362 aa11.66□□□□□ -0.54
UBE2D3-212ENST00000502563 KLK14Q9P0G3 267 aa11.66□□□□□ -0.54
UBE2D3-212ENST00000502563 COG5Q9UP83 839 aa11.66□□□□□ -0.54
UBE2D3-212ENST00000502563 PCDHA5Q9Y5H7 936 aa11.66□□□□□ -0.54
UBE2D3-212ENST00000502563 TRIP11Q15643 1979 aa11.65□□□□□ -0.54
UBE2D3-212ENST00000502563 ATG2AQ2TAZ0 1938 aa11.65□□□□□ -0.54
UBE2D3-212ENST00000502563 ZNF233A6NK53 670 aa11.65□□□□□ -0.54
UBE2D3-212ENST00000502563 RFXAPO00287 272 aa11.65□□□□□ -0.54
UBE2D3-212ENST00000502563 ATMINO43313 823 aaPredicted RBP11.65□□□□□ -0.54
UBE2D3-212ENST00000502563 TRAPPC3O43617 180 aa11.65□□□□□ -0.54
UBE2D3-212ENST00000502563 LILRB3O75022 631 aa11.65□□□□□ -0.54
UBE2D3-212ENST00000502563 PRPF40AO75400 957 aaKnown RBP11.65□□□□□ -0.54
UBE2D3-212ENST00000502563 IBSPP21815 317 aaPredicted RBP11.65□□□□□ -0.54
UBE2D3-212ENST00000502563 DNAJB1P25685 340 aa11.65□□□□□ -0.54
UBE2D3-212ENST00000502563 OR1G1P47890 313 aa11.65□□□□□ -0.54
UBE2D3-212ENST00000502563 AARSP49588 968 aaKnown RBP eCLIP11.65□□□□□ -0.54
UBE2D3-212ENST00000502563 CLDN10P78369 228 aa11.65□□□□□ -0.54
UBE2D3-212ENST00000502563 DSG1Q02413 1049 aa11.65□□□□□ -0.54
UBE2D3-212ENST00000502563 PNOCQ13519 176 aa11.65□□□□□ -0.54
UBE2D3-212ENST00000502563 KCNC3Q14003 757 aa11.65□□□□□ -0.54
UBE2D3-212ENST00000502563 SMC1AQ14683 1233 aaKnown RBP11.65□□□□□ -0.54
UBE2D3-212ENST00000502563 CTC1Q2NKJ3 1217 aa11.65□□□□□ -0.54
UBE2D3-212ENST00000502563 ZCWPW2Q504Y3 356 aa11.65□□□□□ -0.54
UBE2D3-212ENST00000502563 FUT10Q6P4F1 479 aa11.65□□□□□ -0.54
UBE2D3-212ENST00000502563 TMEM173Q86WV6 379 aaPredicted RBP11.65□□□□□ -0.54
UBE2D3-212ENST00000502563 MRPL43Q8N983 215 aaKnown RBP11.65□□□□□ -0.54
UBE2D3-212ENST00000502563 XXYLT1Q8NBI6 393 aa11.65□□□□□ -0.54
UBE2D3-212ENST00000502563 OXCT2Q9BYC2 517 aaPredicted RBP11.65□□□□□ -0.54
UBE2D3-212ENST00000502563 LMBRD1Q9NUN5 540 aa11.65□□□□□ -0.54
UBE2D3-212ENST00000502563 COL6A3P12111 3177 aa11.65□□□□□ -0.54
UBE2D3-212ENST00000502563 ANK1P16157 1881 aa11.64□□□□□ -0.55
UBE2D3-212ENST00000502563 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.64□□□□□ -0.55
UBE2D3-212ENST00000502563 ANO9A1A5B4 782 aa11.64□□□□□ -0.55
UBE2D3-212ENST00000502563 LACTBL1A8MY62 500 aa11.64□□□□□ -0.55
UBE2D3-212ENST00000502563 TISP43B9A030 160 aa11.64□□□□□ -0.55
UBE2D3-212ENST00000502563 SYN3O14994 580 aa11.64□□□□□ -0.55
UBE2D3-212ENST00000502563 CALUO43852 315 aaPredicted RBP11.64□□□□□ -0.55
UBE2D3-212ENST00000502563 PAPLNO95428 1278 aa11.64□□□□□ -0.55
UBE2D3-212ENST00000502563 HARSP12081 509 aaKnown RBP11.64□□□□□ -0.55
UBE2D3-212ENST00000502563 IGFBP4P22692 258 aa11.64□□□□□ -0.55
UBE2D3-212ENST00000502563 ACOT2P49753 483 aa11.64□□□□□ -0.55
UBE2D3-212ENST00000502563 OSTNP61366 133 aa11.64□□□□□ -0.55
UBE2D3-212ENST00000502563 LRRC63Q05C16 580 aa11.64□□□□□ -0.55
UBE2D3-212ENST00000502563 SOX4Q06945 474 aaPredicted RBP11.64□□□□□ -0.55
UBE2D3-212ENST00000502563 USP41Q3LFD5 358 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms