RNA–Protein interactions for RNA: ENST00000498967.3

AC055713.1-201, humanhuman

TSL 2 BASIC

Gene AC055713.1, Length 8,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055713.1-201ENST00000498967 ZCCHC8Q6NZY4 707 aaKnown RBP11.74□□□□□ -0.53
AC055713.1-201ENST00000498967 DGKHQ86XP1 1220 aa11.74□□□□□ -0.53
AC055713.1-201ENST00000498967 LARGE2Q8N3Y3 721 aa11.74□□□□□ -0.53
AC055713.1-201ENST00000498967 TM6SF1Q9BZW5 370 aa11.74□□□□□ -0.53
AC055713.1-201ENST00000498967 AATKQ6ZMQ8 1374 aa11.74□□□□□ -0.53
AC055713.1-201ENST00000498967 ALDH1A1P00352 501 aa11.74□□□□□ -0.53
AC055713.1-201ENST00000498967 ARF4P18085 180 aaPredicted RBP11.74□□□□□ -0.53
AC055713.1-201ENST00000498967 HIRAP54198 1017 aaPredicted RBP11.74□□□□□ -0.53
AC055713.1-201ENST00000498967 SMCO1Q147U7 214 aa11.74□□□□□ -0.53
AC055713.1-201ENST00000498967 P3H1Q32P28 736 aa11.74□□□□□ -0.53
AC055713.1-201ENST00000498967 MMGT1Q8N4V1 131 aa11.74□□□□□ -0.53
AC055713.1-201ENST00000498967 GIMAP8Q8ND71 665 aaPredicted RBP11.74□□□□□ -0.53
AC055713.1-201ENST00000498967 FAM227BQ96M60 508 aa11.74□□□□□ -0.53
AC055713.1-201ENST00000498967 CD209Q9NNX6 404 aa11.74□□□□□ -0.53
AC055713.1-201ENST00000498967 VPS54Q9P1Q0 977 aa11.74□□□□□ -0.53
AC055713.1-201ENST00000498967 C10orf53Q8N6V4 93 aa11.73□□□□□ -0.53
AC055713.1-201ENST00000498967 PSTPIP1O43586 416 aa11.73□□□□□ -0.53
AC055713.1-201ENST00000498967 EZH2Q15910 746 aaKnown RBP11.73□□□□□ -0.53
AC055713.1-201ENST00000498967 NEK5Q6P3R8 708 aa11.73□□□□□ -0.53
AC055713.1-201ENST00000498967 SFR1Q86XK3 245 aa11.73□□□□□ -0.53
AC055713.1-201ENST00000498967 ABI2Q9NYB9 513 aaPredicted RBP11.73□□□□□ -0.53
AC055713.1-201ENST00000498967 CNOT7Q9UIV1 285 aaKnown RBP11.73□□□□□ -0.53
AC055713.1-201ENST00000498967 ZNF608Q9ULD9 1512 aaPredicted RBP11.73□□□□□ -0.53
AC055713.1-201ENST00000498967 E9PBE3 544 aa11.73□□□□□ -0.53
AC055713.1-201ENST00000498967 ZNF862O60290 1169 aa11.73□□□□□ -0.53
AC055713.1-201ENST00000498967 GTF2E2P29084 291 aaKnown RBP11.73□□□□□ -0.53
AC055713.1-201ENST00000498967 BNC1Q01954 994 aa11.73□□□□□ -0.53
AC055713.1-201ENST00000498967 SLC39A6Q13433 755 aa11.73□□□□□ -0.53
AC055713.1-201ENST00000498967 CAMKK2Q96RR4 588 aa11.73□□□□□ -0.53
AC055713.1-201ENST00000498967 ARF5P84085 180 aa11.73□□□□□ -0.53
AC055713.1-201ENST00000498967 OR6B2Q6IFH4 312 aa11.73□□□□□ -0.53
AC055713.1-201ENST00000498967 SYDE1Q6ZW31 735 aaPredicted RBP11.73□□□□□ -0.53
AC055713.1-201ENST00000498967 TMEM35BQ8NCS4 154 aa11.73□□□□□ -0.53
AC055713.1-201ENST00000498967 KRT35Q92764 455 aa11.73□□□□□ -0.53
AC055713.1-201ENST00000498967 YIPF2Q9BWQ6 316 aa11.73□□□□□ -0.53
AC055713.1-201ENST00000498967 RACGAP1Q9H0H5 632 aa11.73□□□□□ -0.53
AC055713.1-201ENST00000498967 DNAJC13O75165 2243 aa11.73□□□□□ -0.53
AC055713.1-201ENST00000498967 UBA6A0AVT1 1052 aaPredicted RBP11.73□□□□□ -0.53
AC055713.1-201ENST00000498967 UBE2QL1A1L167 161 aa11.73□□□□□ -0.53
AC055713.1-201ENST00000498967 HIST2H2ACQ16777 129 aaPredicted RBP11.73□□□□□ -0.53
AC055713.1-201ENST00000498967 HIST2H2AA3Q6FI13 130 aa11.73□□□□□ -0.53
AC055713.1-201ENST00000498967 CROCCP3Q8IVE0 287 aa11.73□□□□□ -0.53
AC055713.1-201ENST00000498967 NFATC2IPQ8NCF5 419 aa11.73□□□□□ -0.53
AC055713.1-201ENST00000498967 USP13Q92995 863 aaPredicted RBP11.73□□□□□ -0.53
AC055713.1-201ENST00000498967 B3GALT6Q96L58 329 aa11.73□□□□□ -0.53
AC055713.1-201ENST00000498967 CCDC177Q9NQR7 707 aaPredicted RBP11.73□□□□□ -0.53
AC055713.1-201ENST00000498967 CLTBP09497 229 aa11.73□□□□□ -0.53
AC055713.1-201ENST00000498967 ZYXQ15942 572 aaKnown RBP11.73□□□□□ -0.53
AC055713.1-201ENST00000498967 TRAPPC3LQ5T215 181 aa11.73□□□□□ -0.53
AC055713.1-201ENST00000498967 PI4K2BQ8TCG2 481 aa11.73□□□□□ -0.53
AC055713.1-201ENST00000498967 C17orf80Q9BSJ5 609 aa11.73□□□□□ -0.53
AC055713.1-201ENST00000498967 NRDE2Q9H7Z3 1164 aa11.73□□□□□ -0.53
AC055713.1-201ENST00000498967 CEP72Q9P209 647 aa11.73□□□□□ -0.53
AC055713.1-201ENST00000498967 FGGP02679 453 aa11.73□□□□□ -0.53
AC055713.1-201ENST00000498967 NPY2RP49146 381 aa11.73□□□□□ -0.53
AC055713.1-201ENST00000498967 PSME3P61289 254 aa11.73□□□□□ -0.53
AC055713.1-201ENST00000498967 TTC30AQ86WT1 665 aa11.73□□□□□ -0.53
AC055713.1-201ENST00000498967 ADAM21Q9UKJ8 722 aa11.73□□□□□ -0.53
AC055713.1-201ENST00000498967 CDYLQ9Y232 598 aa11.73□□□□□ -0.53
AC055713.1-201ENST00000498967 FHOD1Q9Y613 1164 aa11.73□□□□□ -0.53
AC055713.1-201ENST00000498967 RIMBP2O15034 1052 aa11.72□□□□□ -0.53
AC055713.1-201ENST00000498967 MPOP05164 745 aa11.72□□□□□ -0.53
AC055713.1-201ENST00000498967 DPP8Q6V1X1 898 aaPredicted RBP11.72□□□□□ -0.53
AC055713.1-201ENST00000498967 CDKL3Q8IVW4 592 aaPredicted RBP11.72□□□□□ -0.53
AC055713.1-201ENST00000498967 URGCPQ8TCY9 931 aa11.72□□□□□ -0.53
AC055713.1-201ENST00000498967 DNAJC9Q8WXX5 260 aa11.72□□□□□ -0.53
AC055713.1-201ENST00000498967 TRIM10Q9UDY6 481 aa11.72□□□□□ -0.53
AC055713.1-201ENST00000498967 TBX22Q9Y458 520 aa11.72□□□□□ -0.53
AC055713.1-201ENST00000498967 CCDC162PA2VCL2 907 aa11.72□□□□□ -0.53
AC055713.1-201ENST00000498967 LYNP07948 512 aa11.72□□□□□ -0.53
AC055713.1-201ENST00000498967 MAGOHP61326 146 aaKnown RBP11.72□□□□□ -0.53
AC055713.1-201ENST00000498967 ZNF235Q14590 738 aa11.72□□□□□ -0.53
AC055713.1-201ENST00000498967 VEPH1Q14D04 833 aa11.72□□□□□ -0.53
AC055713.1-201ENST00000498967 CDK20Q8IZL9 346 aa11.72□□□□□ -0.53
AC055713.1-201ENST00000498967 SGSM3Q96HU1 749 aa11.72□□□□□ -0.53
AC055713.1-201ENST00000498967 APOL6Q9BWW8 343 aa11.72□□□□□ -0.53
AC055713.1-201ENST00000498967 KIAA1024Q9UPX6 916 aa11.72□□□□□ -0.53
AC055713.1-201ENST00000498967 BTBD3Q9Y2F9 522 aa11.72□□□□□ -0.53
AC055713.1-201ENST00000498967 LRRC14BA6NHZ5 514 aa11.72□□□□□ -0.53
AC055713.1-201ENST00000498967 ASB14A6NK59 587 aa11.72□□□□□ -0.53
AC055713.1-201ENST00000498967 EYA2O00167 538 aa11.72□□□□□ -0.53
AC055713.1-201ENST00000498967 PFKFB1P16118 471 aa11.72□□□□□ -0.53
AC055713.1-201ENST00000498967 RAD23AP54725 363 aa11.72□□□□□ -0.53
AC055713.1-201ENST00000498967 STAT4Q14765 748 aa11.72□□□□□ -0.53
AC055713.1-201ENST00000498967 ANO4Q32M45 955 aa11.72□□□□□ -0.53
AC055713.1-201ENST00000498967 SLC10A4Q96EP9 437 aa11.72□□□□□ -0.53
AC055713.1-201ENST00000498967 SLC9A7Q96T83 725 aa11.72□□□□□ -0.53
AC055713.1-201ENST00000498967 VTA1Q9NP79 307 aa11.72□□□□□ -0.53
AC055713.1-201ENST00000498967 FANCLQ9NW38 375 aa11.72□□□□□ -0.53
AC055713.1-201ENST00000498967 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.72□□□□□ -0.53
AC055713.1-201ENST00000498967 APC2O95996 2303 aa11.72□□□□□ -0.53
AC055713.1-201ENST00000498967 ZW10O43264 779 aa11.72□□□□□ -0.53
AC055713.1-201ENST00000498967 BAIAP3O94812 1187 aa11.72□□□□□ -0.53
AC055713.1-201ENST00000498967 GCP02774 474 aa11.72□□□□□ -0.53
AC055713.1-201ENST00000498967 PPP2R1BP30154 601 aa11.72□□□□□ -0.53
AC055713.1-201ENST00000498967 CBX5P45973 191 aa11.72□□□□□ -0.53
AC055713.1-201ENST00000498967 RESTQ13127 1097 aa11.72□□□□□ -0.53
AC055713.1-201ENST00000498967 PTPROQ16827 1216 aa11.72□□□□□ -0.53
AC055713.1-201ENST00000498967 MZT2BQ6NZ67 158 aa11.72□□□□□ -0.53
AC055713.1-201ENST00000498967 CLHC1Q8NHS4 586 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms