RNA–Protein interactions for RNA: ENST00000498810.1

CDK11A-222, Transcript of cyclin dependent kinase 11A, human

TSL 2

Gene CDK11A, Length 574 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK11A-222	ENST00000498810	MMTAG2	Q9BU76	263 aa	Known RBP	11.71	□□□□□ -0.53
CDK11A-222	ENST00000498810	EMILIN2	Q9BXX0	1053 aa		11.71	□□□□□ -0.53
CDK11A-222	ENST00000498810	FZD8	Q9H461	694 aa		11.71	□□□□□ -0.53
CDK11A-222	ENST00000498810	C17orf75	Q9HAS0	396 aa		11.71	□□□□□ -0.53
CDK11A-222	ENST00000498810	LARS	Q9P2J5	1176 aa	Known RBP	11.71	□□□□□ -0.53
CDK11A-222	ENST00000498810	ANKFY1	Q9P2R3	1169 aa		11.71	□□□□□ -0.53
CDK11A-222	ENST00000498810	GDA	Q9Y2T3	454 aa		11.71	□□□□□ -0.53
CDK11A-222	ENST00000498810	MAP4K5	Q9Y4K4	846 aa		11.71	□□□□□ -0.53
CDK11A-222	ENST00000498810	CLIC4	Q9Y696	253 aa		11.71	□□□□□ -0.53
CDK11A-222	ENST00000498810	PDCD11	Q14690	1871 aa	Known RBP	11.7	□□□□□ -0.54
CDK11A-222	ENST00000498810	ZMYM2	Q9UBW7	1377 aa		11.7	□□□□□ -0.54
CDK11A-222	ENST00000498810		A0A0C4DFX4	3053 aa		11.7	□□□□□ -0.54
CDK11A-222	ENST00000498810	HIDE1	A8MVS5	230 aa		11.7	□□□□□ -0.54
CDK11A-222	ENST00000498810		K7ENM7	598 aa		11.7	□□□□□ -0.54
CDK11A-222	ENST00000498810	C2CD2L	O14523	706 aa		11.7	□□□□□ -0.54
CDK11A-222	ENST00000498810	NRP1	O14786	923 aa		11.7	□□□□□ -0.54
CDK11A-222	ENST00000498810	FSCN2	O14926	492 aa		11.7	□□□□□ -0.54
CDK11A-222	ENST00000498810	RECQL4	O94761	1208 aa		11.7	□□□□□ -0.54
CDK11A-222	ENST00000498810	CXCL14	O95715	111 aa		11.7	□□□□□ -0.54
CDK11A-222	ENST00000498810	PLCG1	P19174	1290 aa		11.7	□□□□□ -0.54
CDK11A-222	ENST00000498810	GUCY2C	P25092	1073 aa		11.7	□□□□□ -0.54
CDK11A-222	ENST00000498810	REST	Q13127	1097 aa		11.7	□□□□□ -0.54
CDK11A-222	ENST00000498810	ADAM15	Q13444	863 aa		11.7	□□□□□ -0.54
CDK11A-222	ENST00000498810	TMEM119	Q4V9L6	283 aa		11.7	□□□□□ -0.54
CDK11A-222	ENST00000498810	HYI	Q5T013	277 aa		11.7	□□□□□ -0.54
CDK11A-222	ENST00000498810	ELMSAN1	Q6PJG2	1045 aa		11.7	□□□□□ -0.54
CDK11A-222	ENST00000498810	KCNK18	Q7Z418	384 aa		11.7	□□□□□ -0.54
CDK11A-222	ENST00000498810	DDX53	Q86TM3	631 aa	Known RBP	11.7	□□□□□ -0.54
CDK11A-222	ENST00000498810	SYT2	Q8N9I0	419 aa	Predicted RBP	11.7	□□□□□ -0.54
CDK11A-222	ENST00000498810	AUTS2	Q8WXX7	1259 aa		11.7	□□□□□ -0.54
CDK11A-222	ENST00000498810	CASP10	Q92851	521 aa		11.7	□□□□□ -0.54
CDK11A-222	ENST00000498810	SNX21	Q969T3	373 aa		11.7	□□□□□ -0.54
CDK11A-222	ENST00000498810	ZNF396	Q96N95	335 aa	Predicted RBP	11.7	□□□□□ -0.54
CDK11A-222	ENST00000498810	PNMA5	Q96PV4	448 aa		11.7	□□□□□ -0.54
CDK11A-222	ENST00000498810	CCDC94	Q9BW85	323 aa	Predicted RBP	11.7	□□□□□ -0.54
CDK11A-222	ENST00000498810	COLEC11	Q9BWP8	271 aa		11.7	□□□□□ -0.54
CDK11A-222	ENST00000498810	CCDC113	Q9H0I3	377 aa		11.7	□□□□□ -0.54
CDK11A-222	ENST00000498810	ZBP1	Q9H171	429 aa		11.7	□□□□□ -0.54
CDK11A-222	ENST00000498810	MRPL17	Q9NRX2	175 aa	Known RBP	11.7	□□□□□ -0.54
CDK11A-222	ENST00000498810	TOPORS	Q9NS56	1045 aa	Predicted RBP	11.7	□□□□□ -0.54
CDK11A-222	ENST00000498810	SNTG2	Q9NY99	539 aa		11.7	□□□□□ -0.54
CDK11A-222	ENST00000498810	FKBPL	Q9UIM3	349 aa		11.7	□□□□□ -0.54
CDK11A-222	ENST00000498810	RBM19	Q9Y4C8	960 aa	Known RBP	11.7	□□□□□ -0.54
CDK11A-222	ENST00000498810	SFI1	A8K8P3	1242 aa		11.69	□□□□□ -0.54
CDK11A-222	ENST00000498810	MBTPS2	O43462	519 aa		11.69	□□□□□ -0.54
CDK11A-222	ENST00000498810	AP1G2	O75843	785 aa		11.69	□□□□□ -0.54
CDK11A-222	ENST00000498810	DDHD2	O94830	711 aa		11.69	□□□□□ -0.54
CDK11A-222	ENST00000498810	PLS3	P13797	630 aa		11.69	□□□□□ -0.54
CDK11A-222	ENST00000498810	AFF1	P51825	1210 aa	Known RBP	11.69	□□□□□ -0.54
CDK11A-222	ENST00000498810	OSTN	P61366	133 aa		11.69	□□□□□ -0.54
CDK11A-222	ENST00000498810	DLX2	Q07687	328 aa	Predicted RBP	11.69	□□□□□ -0.54
CDK11A-222	ENST00000498810	NR6A1	Q15406	480 aa		11.69	□□□□□ -0.54
CDK11A-222	ENST00000498810	TPRN	Q4KMQ1	711 aa		11.69	□□□□□ -0.54
CDK11A-222	ENST00000498810	SPECC1	Q5M775	1068 aa		11.69	□□□□□ -0.54
CDK11A-222	ENST00000498810	FAM173B	Q6P4H8	233 aa		11.69	□□□□□ -0.54
CDK11A-222	ENST00000498810	C1orf186	Q6ZWK4	172 aa		11.69	□□□□□ -0.54
CDK11A-222	ENST00000498810	ZBTB33	Q86T24	672 aa		11.69	□□□□□ -0.54
CDK11A-222	ENST00000498810	TMEM173	Q86WV6	379 aa	Predicted RBP	11.69	□□□□□ -0.54
CDK11A-222	ENST00000498810	LARP4B	Q92615	738 aa	Known RBP	11.69	□□□□□ -0.54
CDK11A-222	ENST00000498810	APOL5	Q9BWW9	433 aa		11.69	□□□□□ -0.54
CDK11A-222	ENST00000498810	ODF2L	Q9ULJ1	636 aa		11.69	□□□□□ -0.54
CDK11A-222	ENST00000498810	MTMR6	Q9Y217	621 aa		11.69	□□□□□ -0.54
CDK11A-222	ENST00000498810	SSX2IP	Q9Y2D8	614 aa		11.69	□□□□□ -0.54
CDK11A-222	ENST00000498810	USP20	Q9Y2K6	914 aa		11.69	□□□□□ -0.54
CDK11A-222	ENST00000498810	PLXNA3	P51805	1871 aa		11.69	□□□□□ -0.54
CDK11A-222	ENST00000498810	NPHP3-ACAD11	A0A0J9YXS1	232 aa		11.68	□□□□□ -0.54
CDK11A-222	ENST00000498810	C2orf71	A6NGG8	1288 aa		11.68	□□□□□ -0.54
CDK11A-222	ENST00000498810	CASTOR2	A6NHX0	329 aa		11.68	□□□□□ -0.54
CDK11A-222	ENST00000498810	TADA2A	O75478	443 aa		11.68	□□□□□ -0.54
CDK11A-222	ENST00000498810	WFS1	O76024	890 aa		11.68	□□□□□ -0.54
CDK11A-222	ENST00000498810	GLP2R	O95838	553 aa		11.68	□□□□□ -0.54
CDK11A-222	ENST00000498810	TH	P07101	528 aa		11.68	□□□□□ -0.54
CDK11A-222	ENST00000498810	CTSA	P10619	480 aa		11.68	□□□□□ -0.54
CDK11A-222	ENST00000498810	KLRC2	P26717	231 aa		11.68	□□□□□ -0.54
CDK11A-222	ENST00000498810	LTBR	P36941	435 aa		11.68	□□□□□ -0.54
CDK11A-222	ENST00000498810	STAT6	P42226	847 aa		11.68	□□□□□ -0.54
CDK11A-222	ENST00000498810	GLUD2	P49448	558 aa		11.68	□□□□□ -0.54
CDK11A-222	ENST00000498810	SLC12A3	P55017	1021 aa		11.68	□□□□□ -0.54
CDK11A-222	ENST00000498810	TUSC3	Q13454	348 aa		11.68	□□□□□ -0.54
CDK11A-222	ENST00000498810	MCM6	Q14566	821 aa		11.68	□□□□□ -0.54
CDK11A-222	ENST00000498810	COL19A1	Q14993	1142 aa		11.68	□□□□□ -0.54
CDK11A-222	ENST00000498810	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	11.68	□□□□□ -0.54
CDK11A-222	ENST00000498810	RRAGB	Q5VZM2	374 aa		11.68	□□□□□ -0.54
CDK11A-222	ENST00000498810	EEF1DP3	Q658K8	133 aa		11.68	□□□□□ -0.54
CDK11A-222	ENST00000498810	CES5A	Q6NT32	575 aa		11.68	□□□□□ -0.54
CDK11A-222	ENST00000498810	FOXD4L3	Q6VB84	417 aa	Predicted RBP	11.68	□□□□□ -0.54
CDK11A-222	ENST00000498810	PPFIBP1	Q86W92	1011 aa		11.68	□□□□□ -0.54
CDK11A-222	ENST00000498810	COLGALT2	Q8IYK4	626 aa		11.68	□□□□□ -0.54
CDK11A-222	ENST00000498810	GJD3	Q8N144	294 aa		11.68	□□□□□ -0.54
CDK11A-222	ENST00000498810	MYCT1	Q8N699	235 aa		11.68	□□□□□ -0.54
CDK11A-222	ENST00000498810	MRPL43	Q8N983	215 aa	Known RBP	11.68	□□□□□ -0.54
CDK11A-222	ENST00000498810	BCL7C	Q8WUZ0	217 aa	Predicted RBP	11.68	□□□□□ -0.54
CDK11A-222	ENST00000498810	RAD54L	Q92698	747 aa		11.68	□□□□□ -0.54
CDK11A-222	ENST00000498810	REEP2	Q9BRK0	252 aa		11.68	□□□□□ -0.54
CDK11A-222	ENST00000498810	HERC2P3	Q9BVR0	1158 aa		11.68	□□□□□ -0.54
CDK11A-222	ENST00000498810	PRKAG3	Q9UGI9	489 aa		11.68	□□□□□ -0.54
CDK11A-222	ENST00000498810	TNFSF13B	Q9Y275	285 aa		11.68	□□□□□ -0.54
CDK11A-222	ENST00000498810	NCOR1	O75376	2440 aa		11.68	□□□□□ -0.54
CDK11A-222	ENST00000498810	XIRP2	A4UGR9	3374 aa		11.67	□□□□□ -0.54
CDK11A-222	ENST00000498810	SF3B1	O75533	1304 aa	Known RBP eCLIP	11.67	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms