RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 ANKRD2Q9GZV1 360 aa4.26□□□□□ -1.73
CLTC-209ENST00000498711 CCDC86Q9H6F5 360 aaKnown RBP4.26□□□□□ -1.73
CLTC-209ENST00000498711 RBM12Q9NTZ6 932 aaKnown RBP4.26□□□□□ -1.73
CLTC-209ENST00000498711 INTUQ9ULD6 942 aa4.26□□□□□ -1.73
CLTC-209ENST00000498711 MRPS23Q9Y3D9 190 aaKnown RBP4.26□□□□□ -1.73
CLTC-209ENST00000498711 LRRC53A6NM62 1247 aa4.26□□□□□ -1.73
CLTC-209ENST00000498711 HSF2BPO75031 334 aa4.26□□□□□ -1.73
CLTC-209ENST00000498711 GHRP10912 638 aa4.26□□□□□ -1.73
CLTC-209ENST00000498711 NAT2P11245 290 aa4.26□□□□□ -1.73
CLTC-209ENST00000498711 L1CAMP32004 1257 aa4.26□□□□□ -1.73
CLTC-209ENST00000498711 ADH7P40394 386 aa4.26□□□□□ -1.73
CLTC-209ENST00000498711 MDH1P40925 334 aaKnown RBP4.26□□□□□ -1.73
CLTC-209ENST00000498711 CCT5P48643 541 aa4.26□□□□□ -1.73
CLTC-209ENST00000498711 ARL4DP49703 201 aa4.26□□□□□ -1.73
CLTC-209ENST00000498711 PCBP4P57723 403 aaKnown RBP4.26□□□□□ -1.73
CLTC-209ENST00000498711 ACTN3Q08043 901 aaPredicted RBP4.26□□□□□ -1.73
CLTC-209ENST00000498711 BYSLQ13895 437 aaKnown RBP4.26□□□□□ -1.73
CLTC-209ENST00000498711 NONOQ15233 471 aaKnown RBP eCLIP4.26□□□□□ -1.73
CLTC-209ENST00000498711 NFIL3Q16649 462 aa4.26□□□□□ -1.73
CLTC-209ENST00000498711 INF2Q27J81 1249 aa4.26□□□□□ -1.73
CLTC-209ENST00000498711 BBS9Q3SYG4 887 aa4.26□□□□□ -1.73
CLTC-209ENST00000498711 CFAP221Q4G0U5 840 aa4.26□□□□□ -1.73
CLTC-209ENST00000498711 CAVIN4Q5BKX8 364 aa4.26□□□□□ -1.73
CLTC-209ENST00000498711 TNFAIP8L3Q5GJ75 292 aa4.26□□□□□ -1.73
CLTC-209ENST00000498711 FAM47AQ5JRC9 791 aa4.26□□□□□ -1.73
CLTC-209ENST00000498711 NFRKBQ6P4R8 1299 aa4.26□□□□□ -1.73
CLTC-209ENST00000498711 CYFIP1Q7L576 1253 aa4.26□□□□□ -1.73
CLTC-209ENST00000498711 TRIM59Q8IWR1 403 aa4.26□□□□□ -1.73
CLTC-209ENST00000498711 GSPT2Q8IYD1 628 aaKnown RBP4.26□□□□□ -1.73
CLTC-209ENST00000498711 SMCR8Q8TEV9 937 aaPredicted RBP4.26□□□□□ -1.73
CLTC-209ENST00000498711 ATP6V1G3Q96LB4 118 aa4.26□□□□□ -1.73
CLTC-209ENST00000498711 NOX5Q96PH1 765 aa4.26□□□□□ -1.73
CLTC-209ENST00000498711 ALS2CR12Q96Q35 445 aa4.26□□□□□ -1.73
CLTC-209ENST00000498711 TMEM47Q9BQJ4 181 aa4.26□□□□□ -1.73
CLTC-209ENST00000498711 NRSN2Q9GZP1 204 aa4.26□□□□□ -1.73
CLTC-209ENST00000498711 KCTD10Q9H3F6 313 aa4.26□□□□□ -1.73
CLTC-209ENST00000498711 TOMM22Q9NS69 142 aa4.26□□□□□ -1.73
CLTC-209ENST00000498711 PIM2Q9P1W9 311 aa4.26□□□□□ -1.73
CLTC-209ENST00000498711 SLC12A6Q9UHW9 1150 aa4.26□□□□□ -1.73
CLTC-209ENST00000498711 ATP6V0A2Q9Y487 856 aa4.26□□□□□ -1.73
CLTC-209ENST00000498711 ZNF536O15090 1300 aa4.26□□□□□ -1.73
CLTC-209ENST00000498711 ZNF646O15015 1829 aaPredicted RBP4.26□□□□□ -1.73
CLTC-209ENST00000498711 CYP3A7-CYP3A51PA0A087WV96 503 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 PRAMEF27A3QJZ7 478 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 WTIPA6NIX2 430 aaPredicted RBP4.25□□□□□ -1.73
CLTC-209ENST00000498711 GFPT2O94808 682 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 ERLIN2O94905 339 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 ECEL1O95672 775 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 MMP10P09238 476 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 BMP4P12644 408 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 RAG1P15918 1043 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 TRIM21P19474 475 aaKnown RBP4.25□□□□□ -1.73
CLTC-209ENST00000498711 CYP3A7P24462 503 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 LSP1P33241 339 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 CCNFP41002 786 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 TNNT3P45378 269 aaPredicted RBP4.25□□□□□ -1.73
CLTC-209ENST00000498711 MTIF2P46199 727 aaKnown RBP4.25□□□□□ -1.73
CLTC-209ENST00000498711 CARSP49589 748 aaKnown RBP4.25□□□□□ -1.73
CLTC-209ENST00000498711 GTF2A1P52655 376 aaPredicted RBP4.25□□□□□ -1.73
CLTC-209ENST00000498711 EPHB1P54762 984 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 TFAP4Q01664 338 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 C19orf57Q0VDD7 668 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 CUL1Q13616 776 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 POU4F3Q15319 338 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 SLC18A3Q16572 532 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 FAM153CQ494X1 144 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 SV2CQ496J9 727 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 FOXB2Q5VYV0 432 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 SPTY2D1Q68D10 685 aaPredicted RBP4.25□□□□□ -1.73
CLTC-209ENST00000498711 IRF2BP2Q7Z5L9 587 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 NEK8Q86SG6 692 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 AFAP1L2Q8N4X5 818 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 USP38Q8NB14 1042 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 BCAS4Q8TDM0 211 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 MORC4Q8TE76 937 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 TTC9Q92623 222 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 WNT8BQ93098 351 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 TLCD1Q96CP7 247 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 CAPZA3Q96KX2 299 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 SYT11Q9BT88 431 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 VCPKMTQ9H867 229 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 ARHGEF4Q9NR80 690 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 INTS7Q9NVH2 962 aaKnown RBP4.25□□□□□ -1.73
CLTC-209ENST00000498711 FAM153AQ9UHL3 310 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 DAAM1Q9Y4D1 1078 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 TRAV20A0A0B4J274 112 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 A0A1W2PQU0 124 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 ADARB2-AS1A8MUL3 147 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 FAM107AO95990 144 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 PGRP06401 933 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 GNA11P29992 359 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 PAFAH1B1P43034 410 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 USP11P51784 963 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 JAM2P57087 298 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 BIRC3Q13489 604 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 UAP1Q16222 522 aaPredicted RBP4.25□□□□□ -1.73
CLTC-209ENST00000498711 BMT2Q1RMZ1 405 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 EDRF1Q3B7T1 1238 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 NAA35Q5VZE5 725 aa4.25□□□□□ -1.73
CLTC-209ENST00000498711 EPM2AIP1Q7L775 607 aaPredicted RBP4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms