RNA–Protein interactions for RNA: ENST00000498689.5

CSTF1-207, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 1 (best)

Gene CSTF1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-207ENST00000498689 FAM228AQ86W67 206 aa5.47□□□□□ -1.53
CSTF1-207ENST00000498689 CAMKK1Q8N5S9 505 aa5.47□□□□□ -1.53
CSTF1-207ENST00000498689 IL31RAQ8NI17 732 aa5.47□□□□□ -1.53
CSTF1-207ENST00000498689 SYTL5Q8TDW5 730 aaPredicted RBP5.47□□□□□ -1.53
CSTF1-207ENST00000498689 SETD7Q8WTS6 366 aaKnown RBP5.47□□□□□ -1.53
CSTF1-207ENST00000498689 HDAC7Q8WUI4 952 aa5.47□□□□□ -1.53
CSTF1-207ENST00000498689 SNRNP27Q8WVK2 155 aaKnown RBP5.47□□□□□ -1.53
CSTF1-207ENST00000498689 GMCL1Q96IK5 515 aa5.47□□□□□ -1.53
CSTF1-207ENST00000498689 FNBP1Q96RU3 617 aa5.47□□□□□ -1.53
CSTF1-207ENST00000498689 RMDN3Q96TC7 470 aa5.47□□□□□ -1.53
CSTF1-207ENST00000498689 KIF2CQ99661 725 aa5.47□□□□□ -1.53
CSTF1-207ENST00000498689 PI4K2AQ9BTU6 479 aa5.47□□□□□ -1.53
CSTF1-207ENST00000498689 PLEKHA4Q9H4M7 779 aa5.47□□□□□ -1.53
CSTF1-207ENST00000498689 TRPV5Q9NQA5 729 aa5.47□□□□□ -1.53
CSTF1-207ENST00000498689 DNMT3BQ9UBC3 853 aaKnown RBP5.47□□□□□ -1.53
CSTF1-207ENST00000498689 SLC6A14Q9UN76 642 aa5.47□□□□□ -1.53
CSTF1-207ENST00000498689 PCDHB15Q9Y5E8 787 aa5.47□□□□□ -1.53
CSTF1-207ENST00000498689 MYOFQ9NZM1 2061 aa5.47□□□□□ -1.53
CSTF1-207ENST00000498689 KDM3AQ9Y4C1 1321 aa5.47□□□□□ -1.53
CSTF1-207ENST00000498689 FLNAP21333 2647 aaKnown RBP5.46□□□□□ -1.53
CSTF1-207ENST00000498689 TRIP11Q15643 1979 aa5.46□□□□□ -1.54
CSTF1-207ENST00000498689 ANO9A1A5B4 782 aa5.46□□□□□ -1.54
CSTF1-207ENST00000498689 MYBPHLA2RUH7 354 aa5.46□□□□□ -1.54
CSTF1-207ENST00000498689 MEIS3P2A8K0S8 358 aa5.46□□□□□ -1.54
CSTF1-207ENST00000498689 HOXA2O43364 376 aa5.46□□□□□ -1.54
CSTF1-207ENST00000498689 PRDM1O75626 825 aa5.46□□□□□ -1.54
CSTF1-207ENST00000498689 NR3C2P08235 984 aa5.46□□□□□ -1.54
CSTF1-207ENST00000498689 MYCLP12524 364 aaPredicted RBP5.46□□□□□ -1.54
CSTF1-207ENST00000498689 SKIP12755 728 aa5.46□□□□□ -1.54
CSTF1-207ENST00000498689 KPNA1P52294 538 aaPredicted RBP5.46□□□□□ -1.54
CSTF1-207ENST00000498689 KRT76Q01546 638 aa5.46□□□□□ -1.54
CSTF1-207ENST00000498689 SP4Q02446 784 aa5.46□□□□□ -1.54
CSTF1-207ENST00000498689 CALD1Q05682 793 aaKnown RBP5.46□□□□□ -1.54
CSTF1-207ENST00000498689 RTP5Q14D33 572 aa5.46□□□□□ -1.54
CSTF1-207ENST00000498689 PEAR1Q5VY43 1037 aaPredicted RBP5.46□□□□□ -1.54
CSTF1-207ENST00000498689 RCSD1Q6JBY9 416 aa5.46□□□□□ -1.54
CSTF1-207ENST00000498689 CTR9Q6PD62 1173 aa5.46□□□□□ -1.54
CSTF1-207ENST00000498689 CYFIP1Q7L576 1253 aa5.46□□□□□ -1.54
CSTF1-207ENST00000498689 TRIM46Q7Z4K8 759 aa5.46□□□□□ -1.54
CSTF1-207ENST00000498689 DEFB119Q8N690 84 aa5.46□□□□□ -1.54
CSTF1-207ENST00000498689 NSUN6Q8TEA1 469 aaKnown RBP5.46□□□□□ -1.54
CSTF1-207ENST00000498689 RLN3Q8WXF3 142 aa5.46□□□□□ -1.54
CSTF1-207ENST00000498689 LPPQ93052 612 aa5.46□□□□□ -1.54
CSTF1-207ENST00000498689 RSPRY1Q96DX4 576 aa5.46□□□□□ -1.54
CSTF1-207ENST00000498689 TCEAL4Q96EI5 215 aa5.46□□□□□ -1.54
CSTF1-207ENST00000498689 ZSWIM3Q96MP5 696 aa5.46□□□□□ -1.54
CSTF1-207ENST00000498689 DNAJC2Q99543 621 aaKnown RBP5.46□□□□□ -1.54
CSTF1-207ENST00000498689 RXFP1Q9HBX9 757 aa5.46□□□□□ -1.54
CSTF1-207ENST00000498689 TBC1D13Q9NVG8 400 aa5.46□□□□□ -1.54
CSTF1-207ENST00000498689 GTSE1Q9NYZ3 720 aa5.46□□□□□ -1.54
CSTF1-207ENST00000498689 BTBD3Q9Y2F9 522 aa5.46□□□□□ -1.54
CSTF1-207ENST00000498689 CKAP5Q14008 2032 aa5.46□□□□□ -1.54
CSTF1-207ENST00000498689 VPS13CQ709C8 3753 aa5.46□□□□□ -1.54
CSTF1-207ENST00000498689 NSD1Q96L73 2696 aaPredicted RBP5.46□□□□□ -1.54
CSTF1-207ENST00000498689 ARID1BQ8NFD5 2236 aaPredicted RBP5.46□□□□□ -1.54
CSTF1-207ENST00000498689 OBSL1O75147 1896 aa5.45□□□□□ -1.54
CSTF1-207ENST00000498689 SHANK1Q9Y566 2161 aa5.45□□□□□ -1.54
CSTF1-207ENST00000498689 TCRBV5S4A2TA0A5A2 114 aa5.45□□□□□ -1.54
CSTF1-207ENST00000498689 VPS37CA5D8V6 355 aaPredicted RBP5.45□□□□□ -1.54
CSTF1-207ENST00000498689 M0QZ92 97 aa5.45□□□□□ -1.54
CSTF1-207ENST00000498689 NOP56O00567 594 aaKnown RBP5.45□□□□□ -1.54
CSTF1-207ENST00000498689 TNFRSF10BO14763 440 aa5.45□□□□□ -1.54
CSTF1-207ENST00000498689 TRIM66O15016 1216 aa5.45□□□□□ -1.54
CSTF1-207ENST00000498689 ZNF862O60290 1169 aa5.45□□□□□ -1.54
CSTF1-207ENST00000498689 DDHD2O94830 711 aa5.45□□□□□ -1.54
CSTF1-207ENST00000498689 CLDN1O95832 211 aa5.45□□□□□ -1.54
CSTF1-207ENST00000498689 TTLL1O95922 423 aa5.45□□□□□ -1.54
CSTF1-207ENST00000498689 SOD2P04179 222 aa5.45□□□□□ -1.54
CSTF1-207ENST00000498689 CHGBP05060 677 aa5.45□□□□□ -1.54
CSTF1-207ENST00000498689 URODP06132 367 aa5.45□□□□□ -1.54
CSTF1-207ENST00000498689 SERPINF2P08697 491 aa5.45□□□□□ -1.54
CSTF1-207ENST00000498689 PSMC3P17980 439 aa5.45□□□□□ -1.54
CSTF1-207ENST00000498689 AFF1P51825 1210 aaKnown RBP5.45□□□□□ -1.54
CSTF1-207ENST00000498689 USP46P62068 366 aa5.45□□□□□ -1.54
CSTF1-207ENST00000498689 SLC14A1Q13336 389 aa5.45□□□□□ -1.54
CSTF1-207ENST00000498689 TBC1D25Q3MII6 688 aa5.45□□□□□ -1.54
CSTF1-207ENST00000498689 USH1GQ495M9 461 aa5.45□□□□□ -1.54
CSTF1-207ENST00000498689 PABPC1LQ4VXU2 614 aaKnown RBP5.45□□□□□ -1.54
CSTF1-207ENST00000498689 C6orf118Q5T5N4 469 aa5.45□□□□□ -1.54
CSTF1-207ENST00000498689 ARHGEF16Q5VV41 709 aa5.45□□□□□ -1.54
CSTF1-207ENST00000498689 FSTL4Q6MZW2 842 aa5.45□□□□□ -1.54
CSTF1-207ENST00000498689 ELMSAN1Q6PJG2 1045 aa5.45□□□□□ -1.54
CSTF1-207ENST00000498689 USP49Q70CQ1 688 aa5.45□□□□□ -1.54
CSTF1-207ENST00000498689 PTRH1Q86Y79 214 aaKnown RBP5.45□□□□□ -1.54
CSTF1-207ENST00000498689 SYNPOQ8N3V7 929 aa5.45□□□□□ -1.54
CSTF1-207ENST00000498689 ZSCAN1Q8NBB4 408 aa5.45□□□□□ -1.54
CSTF1-207ENST00000498689 ZFYVE19Q96K21 471 aa5.45□□□□□ -1.54
CSTF1-207ENST00000498689 IWS1Q96ST2 819 aa5.45□□□□□ -1.54
CSTF1-207ENST00000498689 IL21RQ9HBE5 538 aa5.45□□□□□ -1.54
CSTF1-207ENST00000498689 ZFP14Q9HCL3 533 aa5.45□□□□□ -1.54
CSTF1-207ENST00000498689 PXMP2Q9NR77 195 aa5.45□□□□□ -1.54
CSTF1-207ENST00000498689 MARCH5Q9NX47 278 aa5.45□□□□□ -1.54
CSTF1-207ENST00000498689 SNTG2Q9NY99 539 aa5.45□□□□□ -1.54
CSTF1-207ENST00000498689 TLR7Q9NYK1 1049 aaKnown RBP5.45□□□□□ -1.54
CSTF1-207ENST00000498689 EBF1Q9UH73 591 aa5.45□□□□□ -1.54
CSTF1-207ENST00000498689 DPP7Q9UHL4 492 aa5.45□□□□□ -1.54
CSTF1-207ENST00000498689 ZNF215Q9UL58 517 aaPredicted RBP5.45□□□□□ -1.54
CSTF1-207ENST00000498689 PLAAQ9Y263 795 aa5.45□□□□□ -1.54
CSTF1-207ENST00000498689 MRPS23Q9Y3D9 190 aaKnown RBP5.45□□□□□ -1.54
CSTF1-207ENST00000498689 ZNF532Q9HCE3 1301 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms